RNA–Protein interactions for RNA: ENST00000460483.5

SMNDC1-203, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-203ENST00000460483 H0YIN7 160 aa13.78□□□□□ -0.2
SMNDC1-203ENST00000460483 MNX1P50219 401 aaPredicted RBP13.78□□□□□ -0.2
SMNDC1-203ENST00000460483 DDR1Q08345 913 aa13.78□□□□□ -0.2
SMNDC1-203ENST00000460483 RPGRQ92834 1020 aaKnown RBP13.78□□□□□ -0.2
SMNDC1-203ENST00000460483 PLA2G12BQ9BX93 195 aa13.78□□□□□ -0.2
SMNDC1-203ENST00000460483 PDGFDQ9GZP0 370 aaPredicted RBP13.78□□□□□ -0.2
SMNDC1-203ENST00000460483 USP44Q9H0E7 712 aa13.78□□□□□ -0.2
SMNDC1-203ENST00000460483 SCN7AQ01118 1682 aa13.78□□□□□ -0.2
SMNDC1-203ENST00000460483 ZBTB7BO15156 539 aaPredicted RBP13.77□□□□□ -0.21
SMNDC1-203ENST00000460483 HMMRO75330 724 aa13.77□□□□□ -0.21
SMNDC1-203ENST00000460483 ALDH1B1P30837 517 aa13.77□□□□□ -0.21
SMNDC1-203ENST00000460483 RIC1Q4ADV7 1423 aa13.77□□□□□ -0.21
SMNDC1-203ENST00000460483 ERFEQ4G0M1 354 aa13.77□□□□□ -0.21
SMNDC1-203ENST00000460483 RLBP1P12271 317 aa13.76□□□□□ -0.21
SMNDC1-203ENST00000460483 CCDC57Q2TAC2 916 aa13.76□□□□□ -0.21
SMNDC1-203ENST00000460483 ERICH6BQ5W0A0 696 aa13.76□□□□□ -0.21
SMNDC1-203ENST00000460483 DDX46Q7L014 1031 aaKnown RBP13.76□□□□□ -0.21
SMNDC1-203ENST00000460483 NUTM1Q86Y26 1132 aa13.76□□□□□ -0.21
SMNDC1-203ENST00000460483 RBM17Q96I25 401 aaKnown RBP13.76□□□□□ -0.21
SMNDC1-203ENST00000460483 CDC5LQ99459 802 aaKnown RBP13.76□□□□□ -0.21
SMNDC1-203ENST00000460483 NBPF7P0C2Y1 421 aaPredicted RBP13.75□□□□□ -0.21
SMNDC1-203ENST00000460483 NPR1P16066 1061 aa13.75□□□□□ -0.21
SMNDC1-203ENST00000460483 PTGER2P43116 358 aa13.75□□□□□ -0.21
SMNDC1-203ENST00000460483 CTSWP56202 376 aa13.75□□□□□ -0.21
SMNDC1-203ENST00000460483 SF3B3Q15393 1217 aaKnown RBP13.75□□□□□ -0.21
SMNDC1-203ENST00000460483 TAF7LQ5H9L4 462 aa13.75□□□□□ -0.21
SMNDC1-203ENST00000460483 RTL5Q5HYW3 569 aaPredicted RBP13.75□□□□□ -0.21
SMNDC1-203ENST00000460483 TMC4Q7Z404 712 aa13.75□□□□□ -0.21
SMNDC1-203ENST00000460483 RPAP2Q8IXW5 612 aaPredicted RBP13.75□□□□□ -0.21
SMNDC1-203ENST00000460483 SGIP1Q9BQI5 828 aa13.75□□□□□ -0.21
SMNDC1-203ENST00000460483 KLRG2A4D1S0 409 aaPredicted RBP13.74□□□□□ -0.21
SMNDC1-203ENST00000460483 HCLS1P14317 486 aaPredicted RBP13.74□□□□□ -0.21
SMNDC1-203ENST00000460483 IFIT5Q13325 482 aaKnown RBP13.74□□□□□ -0.21
SMNDC1-203ENST00000460483 CNKSR1Q969H4 720 aa13.74□□□□□ -0.21
SMNDC1-203ENST00000460483 MASTLQ96GX5 879 aa13.74□□□□□ -0.21
SMNDC1-203ENST00000460483 MEIS3Q99687 375 aa13.74□□□□□ -0.21
SMNDC1-203ENST00000460483 ZBTB40Q9NUA8 1239 aa13.74□□□□□ -0.21
SMNDC1-203ENST00000460483 BCORQ6W2J9 1755 aa13.73□□□□□ -0.21
SMNDC1-203ENST00000460483 C4AP0C0L4 1744 aa13.73□□□□□ -0.21
SMNDC1-203ENST00000460483 ANKRD18BA2A2Z9 1011 aa13.73□□□□□ -0.21
SMNDC1-203ENST00000460483 GRIPAP1Q4V328 841 aa13.73□□□□□ -0.21
SMNDC1-203ENST00000460483 STYK1Q6J9G0 422 aa13.73□□□□□ -0.21
SMNDC1-203ENST00000460483 KLHL34Q8N239 644 aa13.73□□□□□ -0.21
SMNDC1-203ENST00000460483 CHMP3Q9Y3E7 222 aa13.73□□□□□ -0.21
SMNDC1-203ENST00000460483 BBOX1O75936 387 aa13.72□□□□□ -0.21
SMNDC1-203ENST00000460483 CSF1RP07333 972 aa13.72□□□□□ -0.21
SMNDC1-203ENST00000460483 IGHMBP2P38935 993 aaKnown RBP13.72□□□□□ -0.21
SMNDC1-203ENST00000460483 CASP7P55210 303 aa13.72□□□□□ -0.21
SMNDC1-203ENST00000460483 RABL6Q3YEC7 729 aaPredicted RBP13.72□□□□□ -0.21
SMNDC1-203ENST00000460483 CRY2Q49AN0 593 aa13.72□□□□□ -0.21
SMNDC1-203ENST00000460483 HSP90AB4PQ58FF6 505 aa13.72□□□□□ -0.21
SMNDC1-203ENST00000460483 C20orf194Q5TEA3 1177 aa13.72□□□□□ -0.21
SMNDC1-203ENST00000460483 SOGA3Q5TF21 947 aa13.72□□□□□ -0.21
SMNDC1-203ENST00000460483 LMBR1LQ6UX01 489 aa13.72□□□□□ -0.21
SMNDC1-203ENST00000460483 C2CD5Q86YS7 1000 aa13.72□□□□□ -0.21
SMNDC1-203ENST00000460483 CRAMP1Q96RY5 1269 aa13.72□□□□□ -0.21
SMNDC1-203ENST00000460483 FBXO3Q9UK99 471 aa13.72□□□□□ -0.21
SMNDC1-203ENST00000460483 LRRFIP2Q9Y608 721 aaKnown RBP13.72□□□□□ -0.21
SMNDC1-203ENST00000460483 RTL9Q8NET4 1388 aa13.71□□□□□ -0.21
SMNDC1-203ENST00000460483 ARFGEF2Q9Y6D5 1785 aa13.71□□□□□ -0.21
SMNDC1-203ENST00000460483 HOXA10P31260 410 aaPredicted RBP13.71□□□□□ -0.21
SMNDC1-203ENST00000460483 MTX1Q13505 466 aa13.71□□□□□ -0.21
SMNDC1-203ENST00000460483 CC2D2BQ6DHV5 1058 aa13.71□□□□□ -0.21
SMNDC1-203ENST00000460483 TTLL11Q8NHH1 800 aa13.71□□□□□ -0.21
SMNDC1-203ENST00000460483 SUCLG2Q96I99 432 aa13.71□□□□□ -0.21
SMNDC1-203ENST00000460483 CRBNQ96SW2 442 aa13.71□□□□□ -0.21
SMNDC1-203ENST00000460483 MPHOSPH8Q99549 860 aa13.71□□□□□ -0.21
SMNDC1-203ENST00000460483 BICC1Q9H694 974 aaKnown RBP13.71□□□□□ -0.21
SMNDC1-203ENST00000460483 PIM2Q9P1W9 311 aa13.71□□□□□ -0.21
SMNDC1-203ENST00000460483 TNNQ9UQP3 1299 aa13.71□□□□□ -0.21
SMNDC1-203ENST00000460483 C10orf71Q711Q0 1435 aa13.71□□□□□ -0.22
SMNDC1-203ENST00000460483 CASZ1Q86V15 1759 aa13.71□□□□□ -0.22
SMNDC1-203ENST00000460483 SRGAP3O43295 1099 aa13.7□□□□□ -0.22
SMNDC1-203ENST00000460483 SRGNP10124 158 aa13.7□□□□□ -0.22
SMNDC1-203ENST00000460483 ANKRD18AQ8IVF6 992 aa13.7□□□□□ -0.22
SMNDC1-203ENST00000460483 ZNF622Q969S3 477 aaKnown RBP eCLIP13.7□□□□□ -0.224e-9■□□□□ 9
SMNDC1-203ENST00000460483 ZBTB47Q9UFB7 747 aaPredicted RBP13.7□□□□□ -0.22
SMNDC1-203ENST00000460483 ITGA6P23229 1130 aa13.69□□□□□ -0.22
SMNDC1-203ENST00000460483 FOXO4P98177 505 aa13.69□□□□□ -0.22
SMNDC1-203ENST00000460483 TTLL6Q8N841 843 aa13.69□□□□□ -0.22
SMNDC1-203ENST00000460483 JARID2Q92833 1246 aaPredicted RBP13.69□□□□□ -0.22
SMNDC1-203ENST00000460483 RWDD1Q9H446 243 aaPredicted RBP13.69□□□□□ -0.22
SMNDC1-203ENST00000460483 ABCC12Q96J65 1359 aa13.69□□□□□ -0.22
SMNDC1-203ENST00000460483 RPS8P62241 208 aaKnown RBP13.68□□□□□ -0.22
SMNDC1-203ENST00000460483 ATP8B2P98198 1209 aa13.68□□□□□ -0.22
SMNDC1-203ENST00000460483 GRAPQ13588 217 aa13.68□□□□□ -0.22
SMNDC1-203ENST00000460483 SYNE4Q8N205 404 aa13.68□□□□□ -0.22
SMNDC1-203ENST00000460483 CCDC24Q8N4L8 307 aa13.68□□□□□ -0.22
SMNDC1-203ENST00000460483 GRAPLQ8TC17 118 aaPredicted RBP13.68□□□□□ -0.22
SMNDC1-203ENST00000460483 NUP98P52948 1817 aa13.67□□□□□ -0.22
SMNDC1-203ENST00000460483 TUBGCP6Q96RT7 1819 aa13.67□□□□□ -0.22
SMNDC1-203ENST00000460483 DALRD3Q5D0E6 543 aaKnown RBP13.67□□□□□ -0.22
SMNDC1-203ENST00000460483 LDHAL6AQ6ZMR3 332 aa13.67□□□□□ -0.22
SMNDC1-203ENST00000460483 ERC1Q8IUD2 1116 aa13.67□□□□□ -0.22
SMNDC1-203ENST00000460483 ANKRD44Q8N8A2 993 aa13.67□□□□□ -0.22
SMNDC1-203ENST00000460483 FHDC1Q9C0D6 1143 aaPredicted RBP13.67□□□□□ -0.22
SMNDC1-203ENST00000460483 GREM2Q9H772 168 aa13.67□□□□□ -0.22
SMNDC1-203ENST00000460483 ANKRD36CQ5JPF3 1778 aa13.66□□□□□ -0.22
SMNDC1-203ENST00000460483 G3BP1Q13283 466 aaKnown RBP eCLIP13.66□□□□□ -0.221e-5■■■■□ 21.3
SMNDC1-203ENST00000460483 FAM161AQ3B820 660 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms