RNA–Protein interactions for RNA: ENST00000460430.5

CDHR4-203, Transcript of cadherin related family member 4, humanhuman

TSL 3

Gene CDHR4, Length 665 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4-203ENST00000460430 C10orf71Q711Q0 1435 aa13.32□□□□□ -0.28
CDHR4-203ENST00000460430 PDE6BP35913 854 aa13.32□□□□□ -0.28
CDHR4-203ENST00000460430 IFIT5Q13325 482 aaKnown RBP13.32□□□□□ -0.28
CDHR4-203ENST00000460430 MTX1Q13505 466 aa13.32□□□□□ -0.28
CDHR4-203ENST00000460430 CCDC57Q2TAC2 916 aa13.32□□□□□ -0.28
CDHR4-203ENST00000460430 TTLL11Q8NHH1 800 aa13.32□□□□□ -0.28
CDHR4-203ENST00000460430 RPGRQ92834 1020 aaKnown RBP13.32□□□□□ -0.28
CDHR4-203ENST00000460430 BRIP1Q9BX63 1249 aa13.32□□□□□ -0.28
CDHR4-203ENST00000460430 RWDD1Q9H446 243 aaPredicted RBP13.32□□□□□ -0.28
CDHR4-203ENST00000460430 SPON1Q9HCB6 807 aa13.32□□□□□ -0.28
CDHR4-203ENST00000460430 PNMA6EA0A0J9YXQ4 647 aa13.31□□□□□ -0.28
CDHR4-203ENST00000460430 ANKRD18BA2A2Z9 1011 aa13.31□□□□□ -0.28
CDHR4-203ENST00000460430 ATP8B2P98198 1209 aa13.31□□□□□ -0.28
CDHR4-203ENST00000460430 C3orf67Q6ZVT6 689 aa13.31□□□□□ -0.28
CDHR4-203ENST00000460430 KLHL34Q8N239 644 aa13.31□□□□□ -0.28
CDHR4-203ENST00000460430 GREM2Q9H772 168 aa13.31□□□□□ -0.28
CDHR4-203ENST00000460430 CSF1RP07333 972 aa13.3□□□□□ -0.28
CDHR4-203ENST00000460430 ITGA6P23229 1130 aa13.3□□□□□ -0.28
CDHR4-203ENST00000460430 SF3B3Q15393 1217 aaKnown RBP13.3□□□□□ -0.28
CDHR4-203ENST00000460430 CDC5LQ99459 802 aaKnown RBP13.3□□□□□ -0.28
CDHR4-203ENST00000460430 PPP1R1BQ9UD71 204 aaPredicted RBP13.3□□□□□ -0.28
CDHR4-203ENST00000460430 RTL9Q8NET4 1388 aa13.3□□□□□ -0.28
CDHR4-203ENST00000460430 ANKRD31Q8N7Z5 1873 aa13.29□□□□□ -0.28
CDHR4-203ENST00000460430 OS9Q13438 667 aaPredicted RBP13.29□□□□□ -0.28
CDHR4-203ENST00000460430 HDAC1Q13547 482 aaPredicted RBP13.29□□□□□ -0.28
CDHR4-203ENST00000460430 POLA2Q14181 598 aa13.29□□□□□ -0.28
CDHR4-203ENST00000460430 B4GALNT3Q6L9W6 998 aa13.29□□□□□ -0.28
CDHR4-203ENST00000460430 DDX46Q7L014 1031 aaKnown RBP13.29□□□□□ -0.28
CDHR4-203ENST00000460430 SIRT2Q8IXJ6 389 aa13.29□□□□□ -0.28
CDHR4-203ENST00000460430 SSH3Q8TE77 659 aa13.29□□□□□ -0.28
CDHR4-203ENST00000460430 COL11A2P13942 1736 aaPredicted RBP13.28□□□□□ -0.28
CDHR4-203ENST00000460430 IGHMBP2P38935 993 aaKnown RBP13.28□□□□□ -0.28
CDHR4-203ENST00000460430 PTGER2P43116 358 aa13.28□□□□□ -0.28
CDHR4-203ENST00000460430 CRY2Q49AN0 593 aa13.28□□□□□ -0.28
CDHR4-203ENST00000460430 C2CD5Q86YS7 1000 aa13.28□□□□□ -0.28
CDHR4-203ENST00000460430 RBM17Q96I25 401 aaKnown RBP13.28□□□□□ -0.28
CDHR4-203ENST00000460430 SGIP1Q9BQI5 828 aa13.28□□□□□ -0.28
CDHR4-203ENST00000460430 SIL1Q9H173 461 aa13.28□□□□□ -0.28
CDHR4-203ENST00000460430 PDZRN3Q9UPQ7 1066 aa13.28□□□□□ -0.28
CDHR4-203ENST00000460430 LRP5O75197 1615 aa13.28□□□□□ -0.28
CDHR4-203ENST00000460430 H0YIN7 160 aa13.27□□□□□ -0.29
CDHR4-203ENST00000460430 SURF6O75683 361 aaKnown RBP13.27□□□□□ -0.29
CDHR4-203ENST00000460430 NPR1P16066 1061 aa13.27□□□□□ -0.29
CDHR4-203ENST00000460430 ANKRD18AQ8IVF6 992 aa13.27□□□□□ -0.29
CDHR4-203ENST00000460430 KLHDC4Q8TBB5 520 aa13.27□□□□□ -0.29
CDHR4-203ENST00000460430 MPHOSPH8Q99549 860 aa13.27□□□□□ -0.29
CDHR4-203ENST00000460430 SEC31BQ9NQW1 1179 aa13.27□□□□□ -0.29
CDHR4-203ENST00000460430 PA2G4Q9UQ80 394 aaKnown RBP13.27□□□□□ -0.29
CDHR4-203ENST00000460430 KLRG2A4D1S0 409 aaPredicted RBP13.26□□□□□ -0.29
CDHR4-203ENST00000460430 RFX5P48382 616 aaPredicted RBP13.26□□□□□ -0.29
CDHR4-203ENST00000460430 HSP90AB4PQ58FF6 505 aa13.26□□□□□ -0.29
CDHR4-203ENST00000460430 CENPQQ7L2Z9 268 aaPredicted RBP13.26□□□□□ -0.29
CDHR4-203ENST00000460430 GCC1Q96CN9 775 aa13.26□□□□□ -0.29
CDHR4-203ENST00000460430 MASTLQ96GX5 879 aa13.26□□□□□ -0.29
CDHR4-203ENST00000460430 ZNF594Q96JF6 807 aaPredicted RBP13.26□□□□□ -0.29
CDHR4-203ENST00000460430 COPRSQ9NQ92 184 aa13.26□□□□□ -0.29
CDHR4-203ENST00000460430 ZBTB47Q9UFB7 747 aaPredicted RBP13.26□□□□□ -0.29
CDHR4-203ENST00000460430 EXOC6BQ9Y2D4 811 aa13.26□□□□□ -0.29
CDHR4-203ENST00000460430 APBB1O00213 710 aa13.25□□□□□ -0.29
CDHR4-203ENST00000460430 IGHDP01880 384 aa13.25□□□□□ -0.29
CDHR4-203ENST00000460430 SRGNP10124 158 aa13.25□□□□□ -0.29
CDHR4-203ENST00000460430 CHRNA5P30532 468 aa13.25□□□□□ -0.29
CDHR4-203ENST00000460430 PTPN12Q05209 780 aaKnown RBP13.25□□□□□ -0.29
CDHR4-203ENST00000460430 G3BP1Q13283 466 aaKnown RBP eCLIP13.25□□□□□ -0.29
CDHR4-203ENST00000460430 GRAPQ13588 217 aa13.25□□□□□ -0.29
CDHR4-203ENST00000460430 GRAPLQ8TC17 118 aaPredicted RBP13.25□□□□□ -0.29
CDHR4-203ENST00000460430 ZNF622Q969S3 477 aaKnown RBP eCLIP13.25□□□□□ -0.29
CDHR4-203ENST00000460430 CNNM1Q9NRU3 951 aa13.25□□□□□ -0.29
CDHR4-203ENST00000460430 SPEF2Q9C093 1822 aa13.25□□□□□ -0.29
CDHR4-203ENST00000460430 KIF13BQ9NQT8 1826 aa13.25□□□□□ -0.29
CDHR4-203ENST00000460430 STYK1Q6J9G0 422 aa13.24□□□□□ -0.29
CDHR4-203ENST00000460430 LDHAL6AQ6ZMR3 332 aa13.24□□□□□ -0.29
CDHR4-203ENST00000460430 ERC1Q8IUD2 1116 aa13.24□□□□□ -0.29
CDHR4-203ENST00000460430 CELF1Q92879 486 aaKnown RBP13.24□□□□□ -0.29
CDHR4-203ENST00000460430 CD2APQ9Y5K6 639 aa13.24□□□□□ -0.29
CDHR4-203ENST00000460430 EYA2O00167 538 aa13.23□□□□□ -0.29
CDHR4-203ENST00000460430 PPEF1O14829 653 aaPredicted RBP13.23□□□□□ -0.29
CDHR4-203ENST00000460430 CIAO1O76071 339 aa13.23□□□□□ -0.29
CDHR4-203ENST00000460430 ALDH1B1P30837 517 aa13.23□□□□□ -0.29
CDHR4-203ENST00000460430 HOXA10P31260 410 aaPredicted RBP13.23□□□□□ -0.29
CDHR4-203ENST00000460430 IL15P40933 162 aaPredicted RBP13.23□□□□□ -0.29
CDHR4-203ENST00000460430 RPS8P62241 208 aaKnown RBP13.23□□□□□ -0.29
CDHR4-203ENST00000460430 CNKSR1Q969H4 720 aa13.23□□□□□ -0.29
CDHR4-203ENST00000460430 CRAMP1Q96RY5 1269 aa13.23□□□□□ -0.29
CDHR4-203ENST00000460430 BCL11AQ9H165 835 aa13.23□□□□□ -0.29
CDHR4-203ENST00000460430 DCTPP1Q9H773 170 aa13.23□□□□□ -0.29
CDHR4-203ENST00000460430 FBXO3Q9UK99 471 aa13.23□□□□□ -0.29
CDHR4-203ENST00000460430 NOP58Q9Y2X3 529 aaKnown RBP13.23□□□□□ -0.29
CDHR4-203ENST00000460430 DLEC1Q9Y238 1755 aa13.22□□□□□ -0.29
CDHR4-203ENST00000460430 COL4A1P02462 1669 aa13.22□□□□□ -0.29
CDHR4-203ENST00000460430 KDM2BQ8NHM5 1336 aa13.22□□□□□ -0.29
CDHR4-203ENST00000460430 RAB11FIP3O75154 756 aa13.22□□□□□ -0.29
CDHR4-203ENST00000460430 DPEP1P16444 411 aa13.22□□□□□ -0.29
CDHR4-203ENST00000460430 TGFB2P61812 414 aa13.22□□□□□ -0.29
CDHR4-203ENST00000460430 METTL24Q5JXM2 366 aa13.22□□□□□ -0.29
CDHR4-203ENST00000460430 TMX4Q9H1E5 349 aaPredicted RBP13.22□□□□□ -0.29
CDHR4-203ENST00000460430 MROH5Q6ZUA9 1318 aa13.21□□□□□ -0.29
CDHR4-203ENST00000460430 A0A0G2JLW4 131 aa13.21□□□□□ -0.29
CDHR4-203ENST00000460430 LRRC24Q50LG9 513 aa13.21□□□□□ -0.29
CDHR4-203ENST00000460430 PRPF40BQ6NWY9 871 aaKnown RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms