RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.28■□□□□ 0.52
LMNB1-203ENST00000460265 NUTM2BA6NNL0 878 aaPredicted RBP18.28■□□□□ 0.52
LMNB1-203ENST00000460265 NUTM2EB1AL46 878 aaPredicted RBP18.28■□□□□ 0.52
LMNB1-203ENST00000460265 ZNF771Q7L3S4 317 aaPredicted RBP18.28■□□□□ 0.52
LMNB1-203ENST00000460265 NUTM2AQ8IVF1 878 aaPredicted RBP18.28■□□□□ 0.52
LMNB1-203ENST00000460265 TFIP11Q9UBB9 837 aaKnown RBP18.28■□□□□ 0.52
LMNB1-203ENST00000460265 VIRMAQ69YN4 1812 aaKnown RBP18.28■□□□□ 0.52
LMNB1-203ENST00000460265 GADD45BO75293 160 aaPredicted RBP18.28■□□□□ 0.52
LMNB1-203ENST00000460265 MCM5P33992 734 aa18.28■□□□□ 0.52
LMNB1-203ENST00000460265 SLFNL1Q499Z3 407 aa18.28■□□□□ 0.52
LMNB1-203ENST00000460265 CCDC171Q6TFL3 1326 aa18.27■□□□□ 0.52
LMNB1-203ENST00000460265 SYT1P21579 422 aa18.27■□□□□ 0.52
LMNB1-203ENST00000460265 MAPK8IP2Q13387 824 aaPredicted RBP18.27■□□□□ 0.52
LMNB1-203ENST00000460265 KIF6Q6ZMV9 814 aa18.27■□□□□ 0.52
LMNB1-203ENST00000460265 PDIA6Q15084 440 aa18.27■□□□□ 0.52
LMNB1-203ENST00000460265 HSP90AB3PQ58FF7 597 aa18.27■□□□□ 0.52
LMNB1-203ENST00000460265 IFIT1P09914 478 aaKnown RBP18.26■□□□□ 0.51
LMNB1-203ENST00000460265 KIAA2012Q0VF49 1180 aa18.26■□□□□ 0.51
LMNB1-203ENST00000460265 GPT2Q8TD30 523 aa18.26■□□□□ 0.51
LMNB1-203ENST00000460265 AOX1Q06278 1338 aa18.26■□□□□ 0.51
LMNB1-203ENST00000460265 SALL3Q9BXA9 1300 aa18.26■□□□□ 0.51
LMNB1-203ENST00000460265 TNNI3KQ59H18 835 aa18.26■□□□□ 0.51
LMNB1-203ENST00000460265 RUFY3Q7L099 469 aa18.26■□□□□ 0.51
LMNB1-203ENST00000460265 CHST3Q7LGC8 479 aa18.26■□□□□ 0.51
LMNB1-203ENST00000460265 KAZALD1Q96I82 304 aa18.26■□□□□ 0.51
LMNB1-203ENST00000460265 FPGT-TNNI3KV9GXZ4 949 aa18.26■□□□□ 0.51
LMNB1-203ENST00000460265 TMEM63CQ9P1W3 806 aa18.26■□□□□ 0.51
LMNB1-203ENST00000460265 CNNM1Q9NRU3 951 aa18.25■□□□□ 0.51
LMNB1-203ENST00000460265 BTG4Q9NY30 223 aa18.25■□□□□ 0.51
LMNB1-203ENST00000460265 LARGE1O95461 756 aa18.25■□□□□ 0.51
LMNB1-203ENST00000460265 BRINP3Q76B58 766 aa18.25■□□□□ 0.51
LMNB1-203ENST00000460265 STK11IPQ8N1F8 1099 aa18.25■□□□□ 0.51
LMNB1-203ENST00000460265 PLBD2Q8NHP8 589 aa18.25■□□□□ 0.51
LMNB1-203ENST00000460265 DBNLQ9UJU6 430 aaKnown RBP18.25■□□□□ 0.51
LMNB1-203ENST00000460265 DNM1Q05193 864 aaKnown RBP18.25■□□□□ 0.51
LMNB1-203ENST00000460265 TTC39AQ5SRH9 613 aa18.25■□□□□ 0.51
LMNB1-203ENST00000460265 HAND2P61296 217 aa18.24■□□□□ 0.51
LMNB1-203ENST00000460265 IPO4Q8TEX9 1081 aaKnown RBP18.24■□□□□ 0.51
LMNB1-203ENST00000460265 TOMM22Q9NS69 142 aa18.24■□□□□ 0.51
LMNB1-203ENST00000460265 TMEM51Q9NW97 253 aa18.24■□□□□ 0.51
LMNB1-203ENST00000460265 ZNF335Q9H4Z2 1342 aaPredicted RBP18.24■□□□□ 0.51
LMNB1-203ENST00000460265 BRD1O95696 1058 aa18.24■□□□□ 0.51
LMNB1-203ENST00000460265 ZNF445P59923 1031 aa18.24■□□□□ 0.51
LMNB1-203ENST00000460265 ZNF589Q86UQ0 364 aaPredicted RBP18.24■□□□□ 0.51
LMNB1-203ENST00000460265 MYRIPQ8NFW9 859 aa18.24■□□□□ 0.51
LMNB1-203ENST00000460265 CCT2P78371 535 aaKnown RBP18.24■□□□□ 0.51
LMNB1-203ENST00000460265 DNAJC10Q8IXB1 793 aa18.24■□□□□ 0.51
LMNB1-203ENST00000460265 INTS4Q96HW7 963 aaKnown RBP18.24■□□□□ 0.51
LMNB1-203ENST00000460265 TBC1D2BQ9UPU7 963 aa18.24■□□□□ 0.51
LMNB1-203ENST00000460265 PHF14O94880 888 aa18.23■□□□□ 0.51
LMNB1-203ENST00000460265 ZSCAN22P10073 491 aaPredicted RBP18.23■□□□□ 0.51
LMNB1-203ENST00000460265 CAMK4Q16566 473 aa18.23■□□□□ 0.51
LMNB1-203ENST00000460265 RAB11FIP4Q86YS3 637 aa18.23■□□□□ 0.51
LMNB1-203ENST00000460265 CCDC158Q5M9N0 1113 aa18.23■□□□□ 0.51
LMNB1-203ENST00000460265 FBXW7Q969H0 707 aa18.23■□□□□ 0.51
LMNB1-203ENST00000460265 TSPY26PQ9H489 355 aa18.23■□□□□ 0.51
LMNB1-203ENST00000460265 SLC27A2O14975 620 aa18.22■□□□□ 0.51
LMNB1-203ENST00000460265 ATP2B3Q16720 1220 aa18.22■□□□□ 0.51
LMNB1-203ENST00000460265 LRRC24Q50LG9 513 aa18.22■□□□□ 0.51
LMNB1-203ENST00000460265 BICD2Q8TD16 824 aa18.22■□□□□ 0.51
LMNB1-203ENST00000460265 PDLIM2Q96JY6 352 aa18.22■□□□□ 0.51
LMNB1-203ENST00000460265 ASAP1Q9ULH1 1129 aa18.22■□□□□ 0.51
LMNB1-203ENST00000460265 HMGN5P82970 282 aaKnown RBP18.22■□□□□ 0.51
LMNB1-203ENST00000460265 PTPN12Q05209 780 aaKnown RBP18.22■□□□□ 0.51
LMNB1-203ENST00000460265 ZSCAN31Q96LW9 406 aaPredicted RBP18.22■□□□□ 0.51
LMNB1-203ENST00000460265 SPATA31A3Q5VYP0 1347 aa18.22■□□□□ 0.51
LMNB1-203ENST00000460265 NPHP1O15259 732 aa18.22■□□□□ 0.51
LMNB1-203ENST00000460265 GUCY1B3Q02153 619 aa18.22■□□□□ 0.51
LMNB1-203ENST00000460265 STARD3NLO95772 234 aa18.21■□□□□ 0.51
LMNB1-203ENST00000460265 MTX1Q13505 466 aa18.21■□□□□ 0.51
LMNB1-203ENST00000460265 ME3Q16798 604 aa18.21■□□□□ 0.51
LMNB1-203ENST00000460265 BRF1Q92994 677 aa18.21■□□□□ 0.51
LMNB1-203ENST00000460265 PUS3Q9BZE2 481 aaKnown RBP18.21■□□□□ 0.51
LMNB1-203ENST00000460265 PCDH11XQ9BZA7 1347 aa18.21■□□□□ 0.51
LMNB1-203ENST00000460265 PCDH11YQ9BZA8 1340 aa18.21■□□□□ 0.51
LMNB1-203ENST00000460265 METTL24Q5JXM2 366 aa18.21■□□□□ 0.51
LMNB1-203ENST00000460265 KIF3AQ9Y496 699 aa18.21■□□□□ 0.51
LMNB1-203ENST00000460265 ACSBG1Q96GR2 724 aa18.21■□□□□ 0.51
LMNB1-203ENST00000460265 NEK1Q96PY6 1258 aa18.21■□□□□ 0.51
LMNB1-203ENST00000460265 NCOA3Q9Y6Q9 1424 aa18.2■□□□□ 0.5
LMNB1-203ENST00000460265 NBPF26B4DH59 902 aa18.2■□□□□ 0.5
LMNB1-203ENST00000460265 ZBTB22O15209 634 aa18.2■□□□□ 0.5
LMNB1-203ENST00000460265 IFIT5Q13325 482 aaKnown RBP18.2■□□□□ 0.5
LMNB1-203ENST00000460265 NBPF14Q5TI25 921 aa18.2■□□□□ 0.5
LMNB1-203ENST00000460265 NBPF10Q6P3W6 841 aaKnown RBP18.2■□□□□ 0.5
LMNB1-203ENST00000460265 NBPF15Q8N660 670 aa18.2■□□□□ 0.5
LMNB1-203ENST00000460265 TRMT112Q9UI30 125 aaKnown RBP18.2■□□□□ 0.5
LMNB1-203ENST00000460265 LDHAL6AQ6ZMR3 332 aa18.2■□□□□ 0.5
LMNB1-203ENST00000460265 PDCL2Q8N4E4 241 aa18.2■□□□□ 0.5
LMNB1-203ENST00000460265 HELBQ8NG08 1087 aaPredicted RBP18.2■□□□□ 0.5
LMNB1-203ENST00000460265 CUL4AQ13619 759 aa18.19■□□□□ 0.5
LMNB1-203ENST00000460265 TAF3Q5VWG9 929 aa18.19■□□□□ 0.5
LMNB1-203ENST00000460265 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.19■□□□□ 0.51e-6■■■□□ 16.7
LMNB1-203ENST00000460265 IDH1O75874 414 aaKnown RBP18.19■□□□□ 0.5
LMNB1-203ENST00000460265 GIMAP6Q6P9H5 292 aa18.19■□□□□ 0.5
LMNB1-203ENST00000460265 DRC7Q8IY82 874 aa18.19■□□□□ 0.5
LMNB1-203ENST00000460265 SYNE4Q8N205 404 aa18.19■□□□□ 0.5
LMNB1-203ENST00000460265 SH2B1Q9NRF2 756 aaPredicted RBP18.19■□□□□ 0.5
LMNB1-203ENST00000460265 TPCN1Q9ULQ1 816 aa18.19■□□□□ 0.5
LMNB1-203ENST00000460265 A0A1B0GUL7 405 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 153.1 ms