RNA–Protein interactions for RNA: ENST00000458358.5

ITGA6-207, Transcript of integrin subunit alpha 6, humanhuman

TSL 5 BASIC

Gene ITGA6, Length 3,261 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-207ENST00000458358 CBX8Q9HC52 389 aa11.73□□□□□ -0.53
ITGA6-207ENST00000458358 MAP3K2Q9Y2U5 619 aa11.73□□□□□ -0.53
ITGA6-207ENST00000458358 SMTNL1A8MU46 457 aa11.73□□□□□ -0.53
ITGA6-207ENST00000458358 GIGYF1O75420 1035 aaPredicted RBP11.73□□□□□ -0.53
ITGA6-207ENST00000458358 OS9Q13438 667 aaPredicted RBP11.73□□□□□ -0.53
ITGA6-207ENST00000458358 CTNNA3Q9UI47 895 aa11.73□□□□□ -0.53
ITGA6-207ENST00000458358 CYP46A1Q9Y6A2 500 aa11.73□□□□□ -0.53
ITGA6-207ENST00000458358 NFAT5O94916 1531 aa11.72□□□□□ -0.53
ITGA6-207ENST00000458358 SRGAP3O43295 1099 aa11.72□□□□□ -0.53
ITGA6-207ENST00000458358 PI4K2BQ8TCG2 481 aa11.72□□□□□ -0.53
ITGA6-207ENST00000458358 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.72□□□□□ -0.53
ITGA6-207ENST00000458358 V9GYY5 206 aaPredicted RBP11.72□□□□□ -0.53
ITGA6-207ENST00000458358 NBPF7P0C2Y1 421 aaPredicted RBP11.72□□□□□ -0.53
ITGA6-207ENST00000458358 ZSCAN25Q6NSZ9 544 aa11.72□□□□□ -0.53
ITGA6-207ENST00000458358 WDR17Q8IZU2 1322 aa11.72□□□□□ -0.53
ITGA6-207ENST00000458358 PTH1RQ03431 593 aa11.71□□□□□ -0.53
ITGA6-207ENST00000458358 ME3Q16798 604 aa11.71□□□□□ -0.53
ITGA6-207ENST00000458358 CDC37L1Q7L3B6 337 aa11.71□□□□□ -0.53
ITGA6-207ENST00000458358 COPS6Q7L5N1 327 aa11.71□□□□□ -0.53
ITGA6-207ENST00000458358 NGLY1Q96IV0 654 aa11.71□□□□□ -0.53
ITGA6-207ENST00000458358 TUBGCP6Q96RT7 1819 aa11.71□□□□□ -0.53
ITGA6-207ENST00000458358 AOX1Q06278 1338 aa11.71□□□□□ -0.53
ITGA6-207ENST00000458358 EPB41L2O43491 1005 aaKnown RBP11.71□□□□□ -0.53
ITGA6-207ENST00000458358 BBXQ8WY36 941 aaPredicted RBP11.71□□□□□ -0.53
ITGA6-207ENST00000458358 TCEANC2Q96MN5 208 aa11.71□□□□□ -0.53
ITGA6-207ENST00000458358 CLIP2Q9UDT6 1046 aa11.71□□□□□ -0.53
ITGA6-207ENST00000458358 MEGF6O75095 1541 aa11.71□□□□□ -0.54
ITGA6-207ENST00000458358 TOM1O60784 492 aa11.71□□□□□ -0.54
ITGA6-207ENST00000458358 A1BGP04217 495 aa11.71□□□□□ -0.54
ITGA6-207ENST00000458358 XAGE3Q8WTP9 111 aa11.71□□□□□ -0.54
ITGA6-207ENST00000458358 DNAJC25Q9H1X3 360 aa11.71□□□□□ -0.54
ITGA6-207ENST00000458358 DBF4Q9UBU7 674 aaPredicted RBP11.71□□□□□ -0.54
ITGA6-207ENST00000458358 ZNF165P49910 485 aa11.7□□□□□ -0.54
ITGA6-207ENST00000458358 CACTINQ8WUQ7 758 aaKnown RBP11.7□□□□□ -0.54
ITGA6-207ENST00000458358 DNAAF4Q8WXU2 420 aa11.7□□□□□ -0.54
ITGA6-207ENST00000458358 DCAF5Q96JK2 942 aa11.7□□□□□ -0.54
ITGA6-207ENST00000458358 SPATA32Q96LK8 384 aa11.7□□□□□ -0.54
ITGA6-207ENST00000458358 CCDC85AQ96PX6 553 aaPredicted RBP11.7□□□□□ -0.54
ITGA6-207ENST00000458358 SH2B1Q9NRF2 756 aaPredicted RBP11.7□□□□□ -0.54
ITGA6-207ENST00000458358 MED1Q15648 1581 aaPredicted RBP11.7□□□□□ -0.54
ITGA6-207ENST00000458358 LTN1O94822 1766 aa11.7□□□□□ -0.54
ITGA6-207ENST00000458358 ZNF75DP51815 510 aa11.7□□□□□ -0.54
ITGA6-207ENST00000458358 BICD2Q8TD16 824 aa11.7□□□□□ -0.54
ITGA6-207ENST00000458358 SSH3Q8TE77 659 aa11.7□□□□□ -0.54
ITGA6-207ENST00000458358 ZSCAN31Q96LW9 406 aaPredicted RBP11.7□□□□□ -0.54
ITGA6-207ENST00000458358 SIL1Q9H173 461 aa11.7□□□□□ -0.54
ITGA6-207ENST00000458358 ZBTB3Q9H5J0 574 aa11.7□□□□□ -0.54
ITGA6-207ENST00000458358 NPHP1O15259 732 aa11.7□□□□□ -0.54
ITGA6-207ENST00000458358 KCNQ4P56696 695 aa11.7□□□□□ -0.54
ITGA6-207ENST00000458358 VPS53Q5VIR6 699 aa11.7□□□□□ -0.54
ITGA6-207ENST00000458358 KIF1BPQ96EK5 621 aa11.7□□□□□ -0.54
ITGA6-207ENST00000458358 RAB11FIP3O75154 756 aa11.69□□□□□ -0.54
ITGA6-207ENST00000458358 ZKSCAN1P17029 563 aaPredicted RBP11.69□□□□□ -0.54
ITGA6-207ENST00000458358 RUFY2Q8WXA3 655 aa11.69□□□□□ -0.54
ITGA6-207ENST00000458358 MYD88Q99836 296 aa11.69□□□□□ -0.54
ITGA6-207ENST00000458358 ASAP1Q9ULH1 1129 aa11.69□□□□□ -0.54
ITGA6-207ENST00000458358 PAXBP1Q9Y5B6 917 aa11.69□□□□□ -0.54
ITGA6-207ENST00000458358 RGPD2P0DJD1 1756 aa11.69□□□□□ -0.54
ITGA6-207ENST00000458358 ST3GAL1Q11201 340 aa11.69□□□□□ -0.54
ITGA6-207ENST00000458358 STK3Q13188 491 aa11.69□□□□□ -0.54
ITGA6-207ENST00000458358 CEP135Q66GS9 1140 aa11.69□□□□□ -0.54
ITGA6-207ENST00000458358 TMOD3Q9NYL9 352 aa11.69□□□□□ -0.54
ITGA6-207ENST00000458358 DDX41Q9UJV9 622 aaKnown RBP11.69□□□□□ -0.54
ITGA6-207ENST00000458358 TPCN1Q9ULQ1 816 aa11.68□□□□□ -0.54
ITGA6-207ENST00000458358 NWD1Q149M9 1564 aa11.68□□□□□ -0.54
ITGA6-207ENST00000458358 STRCQ7RTU9 1775 aa11.68□□□□□ -0.54
ITGA6-207ENST00000458358 DCCP43146 1447 aa11.68□□□□□ -0.54
ITGA6-207ENST00000458358 EXOC5O00471 708 aa11.68□□□□□ -0.54
ITGA6-207ENST00000458358 ZBTB22O15209 634 aa11.68□□□□□ -0.54
ITGA6-207ENST00000458358 FGD1P98174 961 aa11.68□□□□□ -0.54
ITGA6-207ENST00000458358 CCDC144BQ3MJ40 725 aa11.68□□□□□ -0.54
ITGA6-207ENST00000458358 CCDC144CPQ8IYA2 1237 aa11.68□□□□□ -0.54
ITGA6-207ENST00000458358 ARID5BQ14865 1188 aa11.68□□□□□ -0.54
ITGA6-207ENST00000458358 FMNL2Q96PY5 1086 aa11.68□□□□□ -0.54
ITGA6-207ENST00000458358 TRMT1Q9NXH9 659 aaKnown RBP11.68□□□□□ -0.54
ITGA6-207ENST00000458358 NR1I2O75469 434 aa11.67□□□□□ -0.54
ITGA6-207ENST00000458358 GABPB1Q06547 395 aaPredicted RBP11.67□□□□□ -0.54
ITGA6-207ENST00000458358 KIF18AQ8NI77 898 aa11.67□□□□□ -0.54
ITGA6-207ENST00000458358 KLHDC4Q8TBB5 520 aa11.67□□□□□ -0.54
ITGA6-207ENST00000458358 SCAND2PQ9GZW5 306 aaPredicted RBP11.67□□□□□ -0.54
ITGA6-207ENST00000458358 ZSWIM6Q9HCJ5 1215 aa11.67□□□□□ -0.54
ITGA6-207ENST00000458358 ZNF215Q9UL58 517 aaPredicted RBP11.67□□□□□ -0.54
ITGA6-207ENST00000458358 PA2G4Q9UQ80 394 aaKnown RBP11.67□□□□□ -0.54
ITGA6-207ENST00000458358 USP27XA6NNY8 438 aa11.67□□□□□ -0.54
ITGA6-207ENST00000458358 GOLGA6L19H0YKK7 550 aa11.67□□□□□ -0.54
ITGA6-207ENST00000458358 COL9A3Q14050 684 aaPredicted RBP11.67□□□□□ -0.54
ITGA6-207ENST00000458358 FAM98CQ17RN3 349 aaKnown RBP11.67□□□□□ -0.54
ITGA6-207ENST00000458358 FILIP1Q7Z7B0 1213 aa11.67□□□□□ -0.54
ITGA6-207ENST00000458358 PLA2G4DQ86XP0 818 aa11.67□□□□□ -0.54
ITGA6-207ENST00000458358 CEMIPQ8WUJ3 1361 aa11.67□□□□□ -0.54
ITGA6-207ENST00000458358 ERICH4A6NGS2 130 aa11.66□□□□□ -0.54
ITGA6-207ENST00000458358 GLRX3O76003 335 aaKnown RBP11.66□□□□□ -0.54
ITGA6-207ENST00000458358 SNRPA1P09661 255 aaKnown RBP11.66□□□□□ -0.54
ITGA6-207ENST00000458358 PDCP20941 246 aa11.66□□□□□ -0.54
ITGA6-207ENST00000458358 CEBPZQ03701 1054 aaKnown RBP11.66□□□□□ -0.54
ITGA6-207ENST00000458358 SYCP1Q15431 976 aa11.66□□□□□ -0.54
ITGA6-207ENST00000458358 DDX19AQ9NUU7 478 aaKnown RBP11.66□□□□□ -0.54
ITGA6-207ENST00000458358 SLFN14P0C7P3 912 aa11.66□□□□□ -0.54
ITGA6-207ENST00000458358 PTPN14Q15678 1187 aa11.66□□□□□ -0.54
ITGA6-207ENST00000458358 MEX3CQ5U5Q3 659 aaKnown RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms