RNA–Protein interactions for RNA: ENST00000458085.6

CAPN13-203, Transcript of calpain 13, humanhuman

TSL 5

Gene CAPN13, Length 2,269 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-203ENST00000458085 NMIQ13287 307 aaPredicted RBP19.83■□□□□ 0.76
CAPN13-203ENST00000458085 NEUROD6Q96NK8 337 aa19.83■□□□□ 0.76
CAPN13-203ENST00000458085 CICQ96RK0 1608 aaPredicted RBP19.83■□□□□ 0.76
CAPN13-203ENST00000458085 CIAO1O76071 339 aa19.82■□□□□ 0.76
CAPN13-203ENST00000458085 NEK4P51957 841 aa19.82■□□□□ 0.76
CAPN13-203ENST00000458085 PTH1RQ03431 593 aa19.82■□□□□ 0.76
CAPN13-203ENST00000458085 TTLL11Q8NHH1 800 aa19.82■□□□□ 0.76
CAPN13-203ENST00000458085 SMARCC1Q92922 1105 aaPredicted RBP19.82■□□□□ 0.76
CAPN13-203ENST00000458085 FSD1Q9BTV5 496 aa19.82■□□□□ 0.76
CAPN13-203ENST00000458085 IRS4O14654 1257 aaPredicted RBP19.82■□□□□ 0.76
CAPN13-203ENST00000458085 ST18O60284 1047 aa19.82■□□□□ 0.76
CAPN13-203ENST00000458085 CAMTA2O94983 1202 aa19.82■□□□□ 0.76
CAPN13-203ENST00000458085 HSP90AA1P07900 732 aaKnown RBP19.82■□□□□ 0.76
CAPN13-203ENST00000458085 ANAPC15P60006 121 aa19.82■□□□□ 0.76
CAPN13-203ENST00000458085 GREM2Q9H772 168 aa19.82■□□□□ 0.76
CAPN13-203ENST00000458085 ZNF609O15014 1411 aa19.81■□□□□ 0.76
CAPN13-203ENST00000458085 A0A0D9SFI3 127 aa19.81■□□□□ 0.76
CAPN13-203ENST00000458085 EPB41L2O43491 1005 aaKnown RBP19.81■□□□□ 0.76
CAPN13-203ENST00000458085 IL17RAQ96F46 866 aa19.81■□□□□ 0.76
CAPN13-203ENST00000458085 CHGBP05060 677 aa19.81■□□□□ 0.76
CAPN13-203ENST00000458085 LINC00116Q8NCU8 138 aa19.81■□□□□ 0.76
CAPN13-203ENST00000458085 RUFY2Q8WXA3 655 aa19.81■□□□□ 0.76
CAPN13-203ENST00000458085 GPR108Q9NPR9 543 aa19.81■□□□□ 0.76
CAPN13-203ENST00000458085 COL5A3P25940 1745 aaPredicted RBP19.8■□□□□ 0.76
CAPN13-203ENST00000458085 MYH3P11055 1940 aa19.8■□□□□ 0.76
CAPN13-203ENST00000458085 CTSWP56202 376 aa19.8■□□□□ 0.76
CAPN13-203ENST00000458085 IFIT5Q13325 482 aaKnown RBP19.8■□□□□ 0.76
CAPN13-203ENST00000458085 KIAA1211Q6ZU35 1233 aa19.8■□□□□ 0.76
CAPN13-203ENST00000458085 RASEFQ8IZ41 740 aa19.8■□□□□ 0.76
CAPN13-203ENST00000458085 DNAJC2Q99543 621 aaKnown RBP19.8■□□□□ 0.76
CAPN13-203ENST00000458085 UPF3BQ9BZI7 483 aaKnown RBP19.8■□□□□ 0.76
CAPN13-203ENST00000458085 THSD7AQ9UPZ6 1657 aa19.8■□□□□ 0.76
CAPN13-203ENST00000458085 A0A1B0GUL7 405 aa19.79■□□□□ 0.76
CAPN13-203ENST00000458085 FAM177BA6PVY3 158 aa19.79■□□□□ 0.76
CAPN13-203ENST00000458085 SUSD4Q5VX71 490 aa19.79■□□□□ 0.76
CAPN13-203ENST00000458085 ITGA6P23229 1130 aa19.79■□□□□ 0.76
CAPN13-203ENST00000458085 HAUS7Q99871 368 aa19.79■□□□□ 0.76
CAPN13-203ENST00000458085 SNX14Q9Y5W7 946 aa19.79■□□□□ 0.76
CAPN13-203ENST00000458085 TAF7LQ5H9L4 462 aa19.78■□□□□ 0.76
CAPN13-203ENST00000458085 MEX3CQ5U5Q3 659 aaKnown RBP19.78■□□□□ 0.76
CAPN13-203ENST00000458085 SMIM5Q71RC9 77 aa19.78■□□□□ 0.76
CAPN13-203ENST00000458085 CEP126Q9P2H0 1117 aa19.78■□□□□ 0.76
CAPN13-203ENST00000458085 DDX46Q7L014 1031 aaKnown RBP19.77■□□□□ 0.76
CAPN13-203ENST00000458085 HIP1O00291 1037 aa19.77■□□□□ 0.75
CAPN13-203ENST00000458085 PDE8AO60658 829 aa19.77■□□□□ 0.75
CAPN13-203ENST00000458085 ADORA1P30542 326 aa19.77■□□□□ 0.75
CAPN13-203ENST00000458085 ZNF589Q86UQ0 364 aaPredicted RBP19.77■□□□□ 0.75
CAPN13-203ENST00000458085 RIC1Q4ADV7 1423 aa19.76■□□□□ 0.75
CAPN13-203ENST00000458085 HCLS1P14317 486 aaPredicted RBP19.76■□□□□ 0.75
CAPN13-203ENST00000458085 GJD4Q96KN9 370 aaPredicted RBP19.76■□□□□ 0.75
CAPN13-203ENST00000458085 AFF2P51816 1311 aa19.76■□□□□ 0.75
CAPN13-203ENST00000458085 CCDC171Q6TFL3 1326 aa19.76■□□□□ 0.75
CAPN13-203ENST00000458085 BTAF1O14981 1849 aa19.76■□□□□ 0.75
CAPN13-203ENST00000458085 SNRKQ9NRH2 765 aa19.76■□□□□ 0.75
CAPN13-203ENST00000458085 RIPOR2Q9Y4F9 1068 aa19.76■□□□□ 0.75
CAPN13-203ENST00000458085 MED23Q9ULK4 1368 aa19.75■□□□□ 0.75
CAPN13-203ENST00000458085 NOL8Q76FK4 1167 aaKnown RBP19.75■□□□□ 0.75
CAPN13-203ENST00000458085 ZGPATQ8N5A5 531 aaKnown RBP19.75■□□□□ 0.75
CAPN13-203ENST00000458085 FBXO3Q9UK99 471 aa19.75■□□□□ 0.75
CAPN13-203ENST00000458085 CIZ1Q9ULV3 898 aaPredicted RBP19.75■□□□□ 0.75
CAPN13-203ENST00000458085 PRPF40BQ6NWY9 871 aaKnown RBP19.74■□□□□ 0.75
CAPN13-203ENST00000458085 ZNF831Q5JPB2 1677 aa19.74■□□□□ 0.75
CAPN13-203ENST00000458085 ANKRD18BA2A2Z9 1011 aa19.74■□□□□ 0.75
CAPN13-203ENST00000458085 SLFNL1Q499Z3 407 aa19.74■□□□□ 0.75
CAPN13-203ENST00000458085 LDHAL6AQ6ZMR3 332 aa19.74■□□□□ 0.75
CAPN13-203ENST00000458085 TMX3Q96JJ7 454 aa19.74■□□□□ 0.75
CAPN13-203ENST00000458085 NIP7Q9Y221 180 aaKnown RBP eCLIP19.74■□□□□ 0.75
CAPN13-203ENST00000458085 GOLIM4O00461 696 aa19.73■□□□□ 0.75
CAPN13-203ENST00000458085 AEBP2Q6ZN18 517 aaPredicted RBP19.73■□□□□ 0.75
CAPN13-203ENST00000458085 SH3TC1Q8TE82 1336 aa19.73■□□□□ 0.75
CAPN13-203ENST00000458085 RAB3GAP1Q15042 981 aa19.73■□□□□ 0.75
CAPN13-203ENST00000458085 NECTIN1Q15223 517 aa19.73■□□□□ 0.75
CAPN13-203ENST00000458085 MAP4K1Q92918 833 aa19.73■□□□□ 0.75
CAPN13-203ENST00000458085 TNPO1Q92973 898 aaKnown RBP19.73■□□□□ 0.75
CAPN13-203ENST00000458085 XAGE2Q96GT9 111 aa19.73■□□□□ 0.75
CAPN13-203ENST00000458085 SEC62Q99442 399 aaKnown RBP19.73■□□□□ 0.75
CAPN13-203ENST00000458085 UTP14AQ9BVJ6 771 aaKnown RBP19.73■□□□□ 0.75
CAPN13-203ENST00000458085 RBM8AQ9Y5S9 174 aaKnown RBP19.73■□□□□ 0.75
CAPN13-203ENST00000458085 CPA1P15085 419 aa19.72■□□□□ 0.75
CAPN13-203ENST00000458085 ADCK5Q3MIX3 580 aa19.72■□□□□ 0.75
CAPN13-203ENST00000458085 PAG1Q9NWQ8 432 aa19.72■□□□□ 0.75
CAPN13-203ENST00000458085 NTSR2O95665 410 aa19.72■□□□□ 0.75
CAPN13-203ENST00000458085 METTL24Q5JXM2 366 aa19.72■□□□□ 0.75
CAPN13-203ENST00000458085 KBTBD3Q8NAB2 608 aa19.72■□□□□ 0.75
CAPN13-203ENST00000458085 BCORQ6W2J9 1755 aa19.71■□□□□ 0.75
CAPN13-203ENST00000458085 NHSQ6T4R5 1651 aa19.71■□□□□ 0.75
CAPN13-203ENST00000458085 IFIT1P09914 478 aaKnown RBP19.71■□□□□ 0.75
CAPN13-203ENST00000458085 MCM4P33991 863 aa19.71■□□□□ 0.75
CAPN13-203ENST00000458085 CCDC129Q6ZRS4 1044 aa19.71■□□□□ 0.75
CAPN13-203ENST00000458085 KCNB2Q92953 911 aa19.71■□□□□ 0.75
CAPN13-203ENST00000458085 CNNM1Q9NRU3 951 aa19.71■□□□□ 0.75
CAPN13-203ENST00000458085 DDX60Q8IY21 1712 aaKnown RBP19.71■□□□□ 0.75
CAPN13-203ENST00000458085 PARP10Q53GL7 1025 aa19.71■□□□□ 0.75
CAPN13-203ENST00000458085 VGLL2Q8N8G2 317 aa19.71■□□□□ 0.75
CAPN13-203ENST00000458085 AKAP2Q9Y2D5 859 aa19.71■□□□□ 0.75
CAPN13-203ENST00000458085 SSFA2P28290 1259 aa19.7■□□□□ 0.74
CAPN13-203ENST00000458085 DEKP35659 375 aaKnown RBP19.7■□□□□ 0.74
CAPN13-203ENST00000458085 COL9A3Q14050 684 aaPredicted RBP19.7■□□□□ 0.74
CAPN13-203ENST00000458085 SCARF1Q14162 830 aa19.7■□□□□ 0.74
CAPN13-203ENST00000458085 CREB3L3Q68CJ9 461 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms