RNA–Protein interactions for RNA: ENST00000457924.2

UPF3AP2-201, Transcript of UPF3A pseudogene 2, humanhuman

BASIC

Gene UPF3AP2, Length 1,132 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP2-201ENST00000457924 BEGAINQ9BUH8 593 aa18.97■□□□□ 0.63
UPF3AP2-201ENST00000457924 PPP1R42Q7Z4L9 355 aa18.96■□□□□ 0.63
UPF3AP2-201ENST00000457924 ZNF34Q8IZ26 560 aa18.96■□□□□ 0.63
UPF3AP2-201ENST00000457924 PPIP5K2O43314 1243 aa18.95■□□□□ 0.62
UPF3AP2-201ENST00000457924 NTSR2O95665 410 aa18.95■□□□□ 0.62
UPF3AP2-201ENST00000457924 GIGYF2Q6Y7W6 1299 aaKnown RBP18.95■□□□□ 0.62
UPF3AP2-201ENST00000457924 ABHD8Q96I13 439 aa18.95■□□□□ 0.62
UPF3AP2-201ENST00000457924 CAPNS2Q96L46 248 aa18.95■□□□□ 0.62
UPF3AP2-201ENST00000457924 NLRP3Q96P20 1036 aa18.95■□□□□ 0.62
UPF3AP2-201ENST00000457924 THSD7BQ9C0I4 1608 aa18.94■□□□□ 0.62
UPF3AP2-201ENST00000457924 FMR1Q06787 632 aaKnown RBP eCLIP18.94■□□□□ 0.62
UPF3AP2-201ENST00000457924 GRM1Q13255 1194 aa18.94■□□□□ 0.62
UPF3AP2-201ENST00000457924 PARP10Q53GL7 1025 aa18.94■□□□□ 0.62
UPF3AP2-201ENST00000457924 VPS33BQ9H267 617 aa18.94■□□□□ 0.62
UPF3AP2-201ENST00000457924 CIZ1Q9ULV3 898 aaPredicted RBP18.94■□□□□ 0.62
UPF3AP2-201ENST00000457924 ERBB4Q15303 1308 aa18.94■□□□□ 0.62
UPF3AP2-201ENST00000457924 CYP4F22Q6NT55 531 aa18.93■□□□□ 0.62
UPF3AP2-201ENST00000457924 GPR101Q96P66 508 aaPredicted RBP18.93■□□□□ 0.62
UPF3AP2-201ENST00000457924 TRAF5O00463 557 aa18.92■□□□□ 0.62
UPF3AP2-201ENST00000457924 NFE2L2Q16236 605 aa18.92■□□□□ 0.62
UPF3AP2-201ENST00000457924 AOC3Q16853 763 aa18.92■□□□□ 0.62
UPF3AP2-201ENST00000457924 CST9Q5W186 159 aa18.92■□□□□ 0.62
UPF3AP2-201ENST00000457924 C3orf67Q6ZVT6 689 aa18.92■□□□□ 0.62
UPF3AP2-201ENST00000457924 SLC51AQ86UW1 340 aa18.92■□□□□ 0.62
UPF3AP2-201ENST00000457924 SUPT20HQ8NEM7 779 aa18.92■□□□□ 0.62
UPF3AP2-201ENST00000457924 THUMPD2Q9BTF0 503 aaKnown RBP18.92■□□□□ 0.62
UPF3AP2-201ENST00000457924 ADARB2Q9NS39 739 aaKnown RBP18.92■□□□□ 0.62
UPF3AP2-201ENST00000457924 ATP6V0A2Q9Y487 856 aa18.92■□□□□ 0.62
UPF3AP2-201ENST00000457924 TLL2Q9Y6L7 1015 aa18.92■□□□□ 0.62
UPF3AP2-201ENST00000457924 PLEKHF1Q96S99 279 aa18.91■□□□□ 0.62
UPF3AP2-201ENST00000457924 UTP14AQ9BVJ6 771 aaKnown RBP18.91■□□□□ 0.62
UPF3AP2-201ENST00000457924 PNNQ9H307 717 aaKnown RBP18.91■□□□□ 0.62
UPF3AP2-201ENST00000457924 GPRC5DQ9NZD1 345 aa18.91■□□□□ 0.62
UPF3AP2-201ENST00000457924 ZNRF3Q9ULT6 936 aa18.91■□□□□ 0.62
UPF3AP2-201ENST00000457924 MAPK8IP3Q9UPT6 1336 aa18.9■□□□□ 0.62
UPF3AP2-201ENST00000457924 MAP2K2P36507 400 aa18.89■□□□□ 0.61
UPF3AP2-201ENST00000457924 CXCL9Q07325 125 aa18.89■□□□□ 0.61
UPF3AP2-201ENST00000457924 SLC10A5Q5PT55 438 aa18.89■□□□□ 0.61
UPF3AP2-201ENST00000457924 EIF2S2P20042 333 aaKnown RBP18.88■□□□□ 0.61
UPF3AP2-201ENST00000457924 DPP8Q6V1X1 898 aaPredicted RBP18.88■□□□□ 0.61
UPF3AP2-201ENST00000457924 RTFDC1Q9BY42 306 aaPredicted RBP18.88■□□□□ 0.61
UPF3AP2-201ENST00000457924 TSPYL4Q9UJ04 414 aa18.88■□□□□ 0.61
UPF3AP2-201ENST00000457924 ABCC4O15439 1325 aa18.88■□□□□ 0.61
UPF3AP2-201ENST00000457924 CCDC85CA6NKD9 419 aa18.87■□□□□ 0.61
UPF3AP2-201ENST00000457924 BBOX1O75936 387 aa18.87■□□□□ 0.61
UPF3AP2-201ENST00000457924 CELF2O95319 508 aaKnown RBP18.87■□□□□ 0.61
UPF3AP2-201ENST00000457924 FAM161AQ3B820 660 aa18.87■□□□□ 0.61
UPF3AP2-201ENST00000457924 SP8Q8IXZ3 490 aa18.87■□□□□ 0.61
UPF3AP2-201ENST00000457924 MPNDQ8N594 471 aa18.87■□□□□ 0.61
UPF3AP2-201ENST00000457924 CDHR2Q9BYE9 1310 aa18.86■□□□□ 0.61
UPF3AP2-201ENST00000457924 AOC2O75106 756 aa18.86■□□□□ 0.61
UPF3AP2-201ENST00000457924 GMPSP49915 693 aaPredicted RBP18.86■□□□□ 0.61
UPF3AP2-201ENST00000457924 PDIA6Q15084 440 aa18.86■□□□□ 0.61
UPF3AP2-201ENST00000457924 CIAPIN1Q6FI81 312 aa18.86■□□□□ 0.61
UPF3AP2-201ENST00000457924 SAPCD2Q86UD0 394 aa18.86■□□□□ 0.61
UPF3AP2-201ENST00000457924 BCL2L13Q9BXK5 485 aa18.86■□□□□ 0.61
UPF3AP2-201ENST00000457924 LAMB2P55268 1798 aa18.86■□□□□ 0.61
UPF3AP2-201ENST00000457924 ANKRD36CQ5JPF3 1778 aa18.86■□□□□ 0.61
UPF3AP2-201ENST00000457924 TNIP1Q15025 636 aa18.85■□□□□ 0.61
UPF3AP2-201ENST00000457924 HSP90AB3PQ58FF7 597 aa18.85■□□□□ 0.61
UPF3AP2-201ENST00000457924 LRP10Q7Z4F1 713 aa18.85■□□□□ 0.61
UPF3AP2-201ENST00000457924 ZNF579Q8NAF0 562 aaKnown RBP18.85■□□□□ 0.61
UPF3AP2-201ENST00000457924 GLIS2Q9BZE0 524 aaPredicted RBP18.85■□□□□ 0.61
UPF3AP2-201ENST00000457924 RTN4Q9NQC3 1192 aaKnown RBP18.85■□□□□ 0.61
UPF3AP2-201ENST00000457924 CA12O43570 354 aa18.84■□□□□ 0.61
UPF3AP2-201ENST00000457924 KIAA2012Q0VF49 1180 aa18.84■□□□□ 0.61
UPF3AP2-201ENST00000457924 DDX46Q7L014 1031 aaKnown RBP18.84■□□□□ 0.61
UPF3AP2-201ENST00000457924 ZC3H15Q8WU90 426 aaKnown RBP18.84■□□□□ 0.61
UPF3AP2-201ENST00000457924 HHIPL1Q96JK4 782 aa18.84■□□□□ 0.61
UPF3AP2-201ENST00000457924 PGAP2Q9UHJ9 254 aa18.84■□□□□ 0.61
UPF3AP2-201ENST00000457924 TSKSQ9UJT2 592 aa18.84■□□□□ 0.61
UPF3AP2-201ENST00000457924 RAD17O75943 681 aa18.83■□□□□ 0.6
UPF3AP2-201ENST00000457924 PROSER3Q2NL68 480 aa18.83■□□□□ 0.6
UPF3AP2-201ENST00000457924 CDC37L1Q7L3B6 337 aa18.83■□□□□ 0.6
UPF3AP2-201ENST00000457924 ZNF408Q9H9D4 720 aa18.83■□□□□ 0.6
UPF3AP2-201ENST00000457924 ANXA1P04083 346 aa18.82■□□□□ 0.6
UPF3AP2-201ENST00000457924 HCLS1P14317 486 aaPredicted RBP18.82■□□□□ 0.6
UPF3AP2-201ENST00000457924 AIMP1Q12904 312 aaKnown RBP18.82■□□□□ 0.6
UPF3AP2-201ENST00000457924 GRAPQ13588 217 aa18.82■□□□□ 0.6
UPF3AP2-201ENST00000457924 NLRP10Q86W26 655 aa18.82■□□□□ 0.6
UPF3AP2-201ENST00000457924 GRAPLQ8TC17 118 aaPredicted RBP18.82■□□□□ 0.6
UPF3AP2-201ENST00000457924 BABAM1Q9NWV8 329 aa18.82■□□□□ 0.6
UPF3AP2-201ENST00000457924 BRPF1P55201 1214 aaPredicted RBP18.81■□□□□ 0.6
UPF3AP2-201ENST00000457924 RIPK4P57078 832 aa18.81■□□□□ 0.6
UPF3AP2-201ENST00000457924 MLLT1Q03111 559 aaPredicted RBP18.81■□□□□ 0.6
UPF3AP2-201ENST00000457924 COPS6Q7L5N1 327 aa18.81■□□□□ 0.6
UPF3AP2-201ENST00000457924 TRMT112Q9UI30 125 aaKnown RBP18.81■□□□□ 0.6
UPF3AP2-201ENST00000457924 CNOT7Q9UIV1 285 aaKnown RBP18.81■□□□□ 0.6
UPF3AP2-201ENST00000457924 SH3TC1Q8TE82 1336 aa18.8■□□□□ 0.6
UPF3AP2-201ENST00000457924 H7C1D1 291 aa18.8■□□□□ 0.6
UPF3AP2-201ENST00000457924 HIRAP54198 1017 aaPredicted RBP18.8■□□□□ 0.6
UPF3AP2-201ENST00000457924 TCIRG1Q13488 830 aa18.8■□□□□ 0.6
UPF3AP2-201ENST00000457924 TMC4Q7Z404 712 aa18.8■□□□□ 0.6
UPF3AP2-201ENST00000457924 XAGE3Q8WTP9 111 aa18.8■□□□□ 0.6
UPF3AP2-201ENST00000457924 NECTIN2Q92692 538 aa18.8■□□□□ 0.6
UPF3AP2-201ENST00000457924 TAF1P21675 1872 aa18.8■□□□□ 0.6
UPF3AP2-201ENST00000457924 CASP8AP2Q9UKL3 1982 aa18.79■□□□□ 0.6
UPF3AP2-201ENST00000457924 TRPM4Q8TD43 1214 aa18.79■□□□□ 0.6
UPF3AP2-201ENST00000457924 PHF12Q96QT6 1004 aa18.79■□□□□ 0.6
UPF3AP2-201ENST00000457924 RGS19P49795 217 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms