RNA–Protein interactions for RNA: ENST00000457356.8

MSC-AS1-201, MSC antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene MSC-AS1, Length 4,220 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSC-AS1-201ENST00000457356 CCDC94Q9BW85 323 aaPredicted RBP11.34□□□□□ -0.59
MSC-AS1-201ENST00000457356 RAB11FIP3O75154 756 aa11.34□□□□□ -0.59
MSC-AS1-201ENST00000457356 SART3Q15020 963 aaKnown RBP11.34□□□□□ -0.59
MSC-AS1-201ENST00000457356 LRSAM1Q6UWE0 723 aa11.34□□□□□ -0.59
MSC-AS1-201ENST00000457356 ZFYVE9O95405 1425 aa11.34□□□□□ -0.59
MSC-AS1-201ENST00000457356 RNF123Q5XPI4 1314 aa11.34□□□□□ -0.59
MSC-AS1-201ENST00000457356 RNF17Q9BXT8 1623 aaKnown RBP11.34□□□□□ -0.59
MSC-AS1-201ENST00000457356 SMTNL1A8MU46 457 aa11.34□□□□□ -0.59
MSC-AS1-201ENST00000457356 NLRP3Q96P20 1036 aa11.34□□□□□ -0.59
MSC-AS1-201ENST00000457356 ASXL1Q8IXJ9 1541 aa11.34□□□□□ -0.59
MSC-AS1-201ENST00000457356 NEFHP12036 1026 aa11.33□□□□□ -0.59
MSC-AS1-201ENST00000457356 DHX8Q14562 1220 aaKnown RBP11.33□□□□□ -0.59
MSC-AS1-201ENST00000457356 MSL1Q68DK7 614 aa11.33□□□□□ -0.59
MSC-AS1-201ENST00000457356 ANKRD13DQ6ZTN6 518 aa11.33□□□□□ -0.59
MSC-AS1-201ENST00000457356 COPS6Q7L5N1 327 aa11.33□□□□□ -0.59
MSC-AS1-201ENST00000457356 ANO10Q9NW15 660 aa11.33□□□□□ -0.59
MSC-AS1-201ENST00000457356 FKBP4Q02790 459 aaKnown RBP eCLIP11.33□□□□□ -0.6
MSC-AS1-201ENST00000457356 BMP2KLQ5H9B9 411 aa11.33□□□□□ -0.6
MSC-AS1-201ENST00000457356 MYOM2P54296 1465 aa11.33□□□□□ -0.6
MSC-AS1-201ENST00000457356 BMS1Q14692 1282 aaKnown RBP11.33□□□□□ -0.6
MSC-AS1-201ENST00000457356 NUP133Q8WUM0 1156 aa11.33□□□□□ -0.6
MSC-AS1-201ENST00000457356 LIMCH1Q9UPQ0 1083 aa11.33□□□□□ -0.6
MSC-AS1-201ENST00000457356 XAGE3Q8WTP9 111 aa11.33□□□□□ -0.6
MSC-AS1-201ENST00000457356 PHACTR3Q96KR7 559 aa11.33□□□□□ -0.6
MSC-AS1-201ENST00000457356 STX6O43752 255 aa11.32□□□□□ -0.6
MSC-AS1-201ENST00000457356 TOP1P11387 765 aaKnown RBP11.32□□□□□ -0.6
MSC-AS1-201ENST00000457356 IFIT5Q13325 482 aaKnown RBP11.32□□□□□ -0.6
MSC-AS1-201ENST00000457356 ERC1Q8IUD2 1116 aa11.32□□□□□ -0.6
MSC-AS1-201ENST00000457356 KRT222Q8N1A0 295 aa11.32□□□□□ -0.6
MSC-AS1-201ENST00000457356 METTL24Q5JXM2 366 aa11.32□□□□□ -0.6
MSC-AS1-201ENST00000457356 DNAJC10Q8IXB1 793 aa11.32□□□□□ -0.6
MSC-AS1-201ENST00000457356 GIMAP7Q8NHV1 300 aa11.32□□□□□ -0.6
MSC-AS1-201ENST00000457356 DNAAF4Q8WXU2 420 aa11.32□□□□□ -0.6
MSC-AS1-201ENST00000457356 BOLA2Q9H3K6 86 aa11.32□□□□□ -0.6
MSC-AS1-201ENST00000457356 USP6P35125 1406 aa11.32□□□□□ -0.6
MSC-AS1-201ENST00000457356 TXLNAP40222 546 aa11.32□□□□□ -0.6
MSC-AS1-201ENST00000457356 CEP135Q66GS9 1140 aa11.32□□□□□ -0.6
MSC-AS1-201ENST00000457356 TANGO6Q9C0B7 1094 aa11.32□□□□□ -0.6
MSC-AS1-201ENST00000457356 MAP3K5Q99683 1374 aa11.32□□□□□ -0.6
MSC-AS1-201ENST00000457356 C1orf167Q5SNV9 1468 aa11.32□□□□□ -0.6
MSC-AS1-201ENST00000457356 FER1L4A9Z1Z3 1794 aa11.32□□□□□ -0.6
MSC-AS1-201ENST00000457356 ZSCAN12O43309 604 aa11.31□□□□□ -0.6
MSC-AS1-201ENST00000457356 CCDC158Q5M9N0 1113 aa11.31□□□□□ -0.6
MSC-AS1-201ENST00000457356 TMC6Q7Z403 805 aa11.31□□□□□ -0.6
MSC-AS1-201ENST00000457356 TRIM22Q8IYM9 498 aa11.31□□□□□ -0.6
MSC-AS1-201ENST00000457356 CCDC82Q8N4S0 544 aa11.31□□□□□ -0.6
MSC-AS1-201ENST00000457356 TMX3Q96JJ7 454 aa11.31□□□□□ -0.6
MSC-AS1-201ENST00000457356 RAI14Q9P0K7 980 aa11.31□□□□□ -0.6
MSC-AS1-201ENST00000457356 TNNQ9UQP3 1299 aa11.31□□□□□ -0.6
MSC-AS1-201ENST00000457356 PI4KAP2A4QPH2 592 aa11.31□□□□□ -0.6
MSC-AS1-201ENST00000457356 DNA2P51530 1060 aa11.31□□□□□ -0.6
MSC-AS1-201ENST00000457356 PI4KAP1Q8N8J0 262 aa11.31□□□□□ -0.6
MSC-AS1-201ENST00000457356 LGR6Q9HBX8 967 aa11.31□□□□□ -0.6
MSC-AS1-201ENST00000457356 IQGAP3Q86VI3 1631 aa11.31□□□□□ -0.6
MSC-AS1-201ENST00000457356 ERBB3P21860 1342 aa11.31□□□□□ -0.6
MSC-AS1-201ENST00000457356 FSD2A1L4K1 749 aa11.31□□□□□ -0.6
MSC-AS1-201ENST00000457356 EIF5P55010 431 aaKnown RBP11.31□□□□□ -0.6
MSC-AS1-201ENST00000457356 UBE3BQ7Z3V4 1068 aa11.31□□□□□ -0.6
MSC-AS1-201ENST00000457356 ZHX3Q9H4I2 956 aa11.31□□□□□ -0.6
MSC-AS1-201ENST00000457356 SYNMO15061 1565 aa11.31□□□□□ -0.6
MSC-AS1-201ENST00000457356 SNW1Q13573 536 aaKnown RBP11.3□□□□□ -0.6
MSC-AS1-201ENST00000457356 ZNF790Q6PG37 636 aa11.3□□□□□ -0.6
MSC-AS1-201ENST00000457356 KIAA1328Q86T90 577 aa11.3□□□□□ -0.6
MSC-AS1-201ENST00000457356 ZSCAN29Q8IWY8 852 aaPredicted RBP11.3□□□□□ -0.6
MSC-AS1-201ENST00000457356 CDC5LQ99459 802 aaKnown RBP11.3□□□□□ -0.6
MSC-AS1-201ENST00000457356 SPINK5Q9NQ38 1064 aaPredicted RBP11.3□□□□□ -0.6
MSC-AS1-201ENST00000457356 MBIPQ9NS73 344 aa11.3□□□□□ -0.6
MSC-AS1-201ENST00000457356 CWC25Q9NXE8 425 aaPredicted RBP11.3□□□□□ -0.6
MSC-AS1-201ENST00000457356 TMOD2Q9NZR1 351 aa11.3□□□□□ -0.6
MSC-AS1-201ENST00000457356 DACH1Q9UI36 760 aa11.3□□□□□ -0.6
MSC-AS1-201ENST00000457356 ANKARQ7Z5J8 1434 aa11.3□□□□□ -0.6
MSC-AS1-201ENST00000457356 FLIIQ13045 1269 aa11.3□□□□□ -0.6
MSC-AS1-201ENST00000457356 C17orf53Q8N3J3 647 aaPredicted RBP11.3□□□□□ -0.6
MSC-AS1-201ENST00000457356 PIBF1Q8WXW3 757 aa11.3□□□□□ -0.6
MSC-AS1-201ENST00000457356 RNF216Q9NWF9 866 aaPredicted RBP11.3□□□□□ -0.6
MSC-AS1-201ENST00000457356 CHPF2Q9P2E5 772 aa11.3□□□□□ -0.6
MSC-AS1-201ENST00000457356 MAP3K2Q9Y2U5 619 aa11.3□□□□□ -0.6
MSC-AS1-201ENST00000457356 POLR3AO14802 1390 aaPredicted RBP11.3□□□□□ -0.6
MSC-AS1-201ENST00000457356 KCNQ4P56696 695 aa11.3□□□□□ -0.6
MSC-AS1-201ENST00000457356 MCM6Q14566 821 aa11.3□□□□□ -0.6
MSC-AS1-201ENST00000457356 FLAD1Q8NFF5 587 aa11.3□□□□□ -0.6
MSC-AS1-201ENST00000457356 CLEC11AQ9Y240 323 aa11.3□□□□□ -0.6
MSC-AS1-201ENST00000457356 SBNO2Q9Y2G9 1366 aa11.3□□□□□ -0.6
MSC-AS1-201ENST00000457356 GOLGA6L7A0A1B0GV03 622 aa11.3□□□□□ -0.6
MSC-AS1-201ENST00000457356 CASQ1P31415 396 aa11.3□□□□□ -0.6
MSC-AS1-201ENST00000457356 IL13P35225 146 aa11.3□□□□□ -0.6
MSC-AS1-201ENST00000457356 MNAT1P51948 309 aa11.3□□□□□ -0.6
MSC-AS1-201ENST00000457356 GNG11P61952 73 aa11.3□□□□□ -0.6
MSC-AS1-201ENST00000457356 CCAR1Q8IX12 1150 aaKnown RBP11.3□□□□□ -0.6
MSC-AS1-201ENST00000457356 GBP3Q9H0R5 595 aa11.3□□□□□ -0.6
MSC-AS1-201ENST00000457356 ABCF2Q9UG63 623 aa11.3□□□□□ -0.6
MSC-AS1-201ENST00000457356 TCEAL9Q9UHQ7 104 aa11.3□□□□□ -0.6
MSC-AS1-201ENST00000457356 NKTRP30414 1462 aaKnown RBP11.29□□□□□ -0.6
MSC-AS1-201ENST00000457356 KIF5CO60282 957 aa11.29□□□□□ -0.6
MSC-AS1-201ENST00000457356 SKILP12757 684 aa11.29□□□□□ -0.6
MSC-AS1-201ENST00000457356 UBE2HP62256 183 aa11.29□□□□□ -0.6
MSC-AS1-201ENST00000457356 TTC39AQ5SRH9 613 aa11.29□□□□□ -0.6
MSC-AS1-201ENST00000457356 C16orf71Q8IYS4 520 aaPredicted RBP11.29□□□□□ -0.6
MSC-AS1-201ENST00000457356 TCEANC2Q96MN5 208 aa11.29□□□□□ -0.6
MSC-AS1-201ENST00000457356 THRAP3Q9Y2W1 955 aaKnown RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms