RNA–Protein interactions for RNA: ENST00000456932.6

CSPG4P10-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 10, humanhuman

BASIC

Gene CSPG4P10, Length 4,817 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P10-201ENST00000456932 SPATA31D1Q6ZQQ2 1576 aa13.21□□□□□ -0.29
CSPG4P10-201ENST00000456932 NPHP4O75161 1426 aaPredicted RBP13.21□□□□□ -0.3
CSPG4P10-201ENST00000456932 IL2RBP14784 551 aa13.21□□□□□ -0.3
CSPG4P10-201ENST00000456932 ZSCAN23Q3MJ62 389 aa13.21□□□□□ -0.3
CSPG4P10-201ENST00000456932 AXDND1Q5T1B0 1012 aaPredicted RBP13.21□□□□□ -0.3
CSPG4P10-201ENST00000456932 CCDC47Q96A33 483 aaKnown RBP13.21□□□□□ -0.3
CSPG4P10-201ENST00000456932 KDM4AO75164 1064 aa13.2□□□□□ -0.3
CSPG4P10-201ENST00000456932 ARHGEF25Q86VW2 580 aa13.2□□□□□ -0.3
CSPG4P10-201ENST00000456932 DDX17Q92841 729 aaKnown RBP13.2□□□□□ -0.3
CSPG4P10-201ENST00000456932 INTS4Q96HW7 963 aaKnown RBP13.2□□□□□ -0.3
CSPG4P10-201ENST00000456932 TRMT112Q9UI30 125 aaKnown RBP13.2□□□□□ -0.3
CSPG4P10-201ENST00000456932 ZNF652Q9Y2D9 606 aa13.2□□□□□ -0.3
CSPG4P10-201ENST00000456932 METTL22Q9BUU2 404 aaPredicted RBP13.2□□□□□ -0.3
CSPG4P10-201ENST00000456932 PANK2Q9BZ23 570 aa13.2□□□□□ -0.3
CSPG4P10-201ENST00000456932 ZSCAN22P10073 491 aaPredicted RBP13.2□□□□□ -0.3
CSPG4P10-201ENST00000456932 DYNC1I1O14576 645 aa13.2□□□□□ -0.3
CSPG4P10-201ENST00000456932 AK2P54819 239 aa13.2□□□□□ -0.3
CSPG4P10-201ENST00000456932 BEND3Q5T5X7 828 aa13.2□□□□□ -0.3
CSPG4P10-201ENST00000456932 SUCLG2Q96I99 432 aa13.2□□□□□ -0.3
CSPG4P10-201ENST00000456932 NEK1Q96PY6 1258 aa13.2□□□□□ -0.3
CSPG4P10-201ENST00000456932 PCDH11XQ9BZA7 1347 aa13.19□□□□□ -0.3
CSPG4P10-201ENST00000456932 PCDH11YQ9BZA8 1340 aa13.19□□□□□ -0.3
CSPG4P10-201ENST00000456932 ME1P48163 572 aa13.19□□□□□ -0.3
CSPG4P10-201ENST00000456932 NACAP1Q9BZK3 213 aa13.19□□□□□ -0.3
CSPG4P10-201ENST00000456932 SCAND2PQ9GZW5 306 aaPredicted RBP13.19□□□□□ -0.3
CSPG4P10-201ENST00000456932 ADAMTS13Q76LX8 1427 aa13.19□□□□□ -0.3
CSPG4P10-201ENST00000456932 USP31Q70CQ4 1352 aa13.19□□□□□ -0.3
CSPG4P10-201ENST00000456932 ANKRD18BA2A2Z9 1011 aa13.19□□□□□ -0.3
CSPG4P10-201ENST00000456932 SGSM2O43147 1006 aa13.19□□□□□ -0.3
CSPG4P10-201ENST00000456932 NAT10Q9H0A0 1025 aaKnown RBP13.19□□□□□ -0.3
CSPG4P10-201ENST00000456932 ZPR1O75312 459 aa13.19□□□□□ -0.3
CSPG4P10-201ENST00000456932 USP8P40818 1118 aa13.19□□□□□ -0.3
CSPG4P10-201ENST00000456932 NECAB1Q8N987 351 aa13.19□□□□□ -0.3
CSPG4P10-201ENST00000456932 ZNF496Q96IT1 587 aaPredicted RBP13.19□□□□□ -0.3
CSPG4P10-201ENST00000456932 SNRKQ9NRH2 765 aa13.19□□□□□ -0.3
CSPG4P10-201ENST00000456932 IL15P40933 162 aaPredicted RBP13.18□□□□□ -0.3
CSPG4P10-201ENST00000456932 TCEANC2Q96MN5 208 aa13.18□□□□□ -0.3
CSPG4P10-201ENST00000456932 TFCP2Q12800 502 aa13.18□□□□□ -0.3
CSPG4P10-201ENST00000456932 PDILTQ8N807 584 aa13.18□□□□□ -0.3
CSPG4P10-201ENST00000456932 IPO4Q8TEX9 1081 aaKnown RBP13.18□□□□□ -0.3
CSPG4P10-201ENST00000456932 RICTORQ6R327 1708 aa13.18□□□□□ -0.3
CSPG4P10-201ENST00000456932 CD163L1Q9NR16 1453 aa13.18□□□□□ -0.3
CSPG4P10-201ENST00000456932 RAD50Q92878 1312 aa13.18□□□□□ -0.3
CSPG4P10-201ENST00000456932 OSBPL3Q9H4L5 887 aa13.18□□□□□ -0.3
CSPG4P10-201ENST00000456932 KDRP35968 1356 aa13.18□□□□□ -0.3
CSPG4P10-201ENST00000456932 OVOS2A0A0J9YW53 1432 aa13.18□□□□□ -0.3
CSPG4P10-201ENST00000456932 OVOS2Q6IE36 1432 aa13.18□□□□□ -0.3
CSPG4P10-201ENST00000456932 IGHMBP2P38935 993 aaKnown RBP13.18□□□□□ -0.3
CSPG4P10-201ENST00000456932 MAP3K11Q16584 847 aa13.18□□□□□ -0.3
CSPG4P10-201ENST00000456932 LDHAL6AQ6ZMR3 332 aa13.18□□□□□ -0.3
CSPG4P10-201ENST00000456932 AIDAQ96BJ3 306 aa13.18□□□□□ -0.3
CSPG4P10-201ENST00000456932 CCDC171Q6TFL3 1326 aa13.17□□□□□ -0.3
CSPG4P10-201ENST00000456932 TECPR2O15040 1411 aa13.17□□□□□ -0.3
CSPG4P10-201ENST00000456932 COL3A1P02461 1466 aaPredicted RBP13.17□□□□□ -0.3
CSPG4P10-201ENST00000456932 TTLL5Q6EMB2 1281 aa13.17□□□□□ -0.3
CSPG4P10-201ENST00000456932 PRM3Q9NNZ6 103 aa13.17□□□□□ -0.3
CSPG4P10-201ENST00000456932 CREB3L3Q68CJ9 461 aa13.17□□□□□ -0.3
CSPG4P10-201ENST00000456932 ANTXR1Q9H6X2 564 aa13.17□□□□□ -0.3
CSPG4P10-201ENST00000456932 DHX37Q8IY37 1157 aaKnown RBP13.17□□□□□ -0.3
CSPG4P10-201ENST00000456932 KLHDC4Q8TBB5 520 aa13.17□□□□□ -0.3
CSPG4P10-201ENST00000456932 GTF2F1P35269 517 aaKnown RBP eCLIP13.16□□□□□ -0.3
CSPG4P10-201ENST00000456932 GCKRQ14397 625 aa13.16□□□□□ -0.3
CSPG4P10-201ENST00000456932 DHX8Q14562 1220 aaKnown RBP13.16□□□□□ -0.3
CSPG4P10-201ENST00000456932 MCMDC2Q4G0Z9 681 aa13.16□□□□□ -0.3
CSPG4P10-201ENST00000456932 PLBD2Q8NHP8 589 aa13.16□□□□□ -0.3
CSPG4P10-201ENST00000456932 LMTK3Q96Q04 1460 aa13.16□□□□□ -0.3
CSPG4P10-201ENST00000456932 UBE2HP62256 183 aa13.16□□□□□ -0.3
CSPG4P10-201ENST00000456932 PHKG2P15735 406 aa13.16□□□□□ -0.3
CSPG4P10-201ENST00000456932 XBP1P17861 261 aa13.16□□□□□ -0.3
CSPG4P10-201ENST00000456932 CCAR1Q8IX12 1150 aaKnown RBP13.16□□□□□ -0.3
CSPG4P10-201ENST00000456932 TIGD1Q96MW7 591 aa13.16□□□□□ -0.3
CSPG4P10-201ENST00000456932 CDKL5O76039 1030 aa13.16□□□□□ -0.3
CSPG4P10-201ENST00000456932 SMC2O95347 1197 aa13.16□□□□□ -0.3
CSPG4P10-201ENST00000456932 SNX14Q9Y5W7 946 aa13.16□□□□□ -0.3
CSPG4P10-201ENST00000456932 CCDC69A6NI79 296 aa13.15□□□□□ -0.3
CSPG4P10-201ENST00000456932 CCP110O43303 1012 aa13.15□□□□□ -0.3
CSPG4P10-201ENST00000456932 KIAA0754O94854 1291 aa13.15□□□□□ -0.3
CSPG4P10-201ENST00000456932 TDO2P48775 406 aa13.15□□□□□ -0.3
CSPG4P10-201ENST00000456932 LRSAM1Q6UWE0 723 aa13.15□□□□□ -0.3
CSPG4P10-201ENST00000456932 STK11IPQ8N1F8 1099 aa13.15□□□□□ -0.3
CSPG4P10-201ENST00000456932 STAP2Q9UGK3 403 aa13.15□□□□□ -0.3
CSPG4P10-201ENST00000456932 CNPY2Q9Y2B0 182 aa13.15□□□□□ -0.3
CSPG4P10-201ENST00000456932 SSH2Q76I76 1423 aa13.15□□□□□ -0.3
CSPG4P10-201ENST00000456932 IRX3P78415 501 aaPredicted RBP13.15□□□□□ -0.3
CSPG4P10-201ENST00000456932 CAMK4Q16566 473 aa13.15□□□□□ -0.3
CSPG4P10-201ENST00000456932 USP48Q86UV5 1035 aa13.15□□□□□ -0.3
CSPG4P10-201ENST00000456932 JMYQ8N9B5 988 aa13.15□□□□□ -0.3
CSPG4P10-201ENST00000456932 EPB41L2O43491 1005 aaKnown RBP13.15□□□□□ -0.3
CSPG4P10-201ENST00000456932 IGSF3O75054 1194 aa13.15□□□□□ -0.3
CSPG4P10-201ENST00000456932 F13A1P00488 732 aa13.15□□□□□ -0.3
CSPG4P10-201ENST00000456932 CPA1P15085 419 aa13.15□□□□□ -0.3
CSPG4P10-201ENST00000456932 HSPA4P34932 840 aa13.15□□□□□ -0.3
CSPG4P10-201ENST00000456932 BRF1Q92994 677 aa13.15□□□□□ -0.3
CSPG4P10-201ENST00000456932 LRP2BPQ9P2M1 347 aa13.15□□□□□ -0.3
CSPG4P10-201ENST00000456932 CCT2P78371 535 aaKnown RBP13.14□□□□□ -0.31
CSPG4P10-201ENST00000456932 BICDL1Q6ZP65 573 aa13.14□□□□□ -0.31
CSPG4P10-201ENST00000456932 TRIM22Q8IYM9 498 aa13.14□□□□□ -0.31
CSPG4P10-201ENST00000456932 IFT172Q9UG01 1749 aa13.14□□□□□ -0.31
CSPG4P10-201ENST00000456932 KIF20BQ96Q89 1820 aa13.14□□□□□ -0.31
CSPG4P10-201ENST00000456932 ZNF213O14771 459 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms