RNA–Protein interactions for RNA: ENST00000456150.5

CSPG5-203, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 1 (best) BASIC

Gene CSPG5, Length 2,089 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-203ENST00000456150 JCADQ9P266 1359 aa24.02■■□□□ 1.44
CSPG5-203ENST00000456150 ATP5JP18859 108 aa24.01■■□□□ 1.43
CSPG5-203ENST00000456150 PTPN12Q05209 780 aaKnown RBP24.01■■□□□ 1.43
CSPG5-203ENST00000456150 UBE3BQ7Z3V4 1068 aa24.01■■□□□ 1.43
CSPG5-203ENST00000456150 TSPY26PQ9H489 355 aa24.01■■□□□ 1.43
CSPG5-203ENST00000456150 PDIA4P13667 645 aaKnown RBP24.01■■□□□ 1.43
CSPG5-203ENST00000456150 GJB2P29033 226 aa24.01■■□□□ 1.43
CSPG5-203ENST00000456150 TNNI3KQ59H18 835 aa24.01■■□□□ 1.43
CSPG5-203ENST00000456150 HMG20BQ9P0W2 317 aa24.01■■□□□ 1.43
CSPG5-203ENST00000456150 FPGT-TNNI3KV9GXZ4 949 aa24.01■■□□□ 1.43
CSPG5-203ENST00000456150 GADD45BO75293 160 aaPredicted RBP24■■□□□ 1.43
CSPG5-203ENST00000456150 ANKRD1Q15327 319 aa24■■□□□ 1.43
CSPG5-203ENST00000456150 CSPP1Q1MSJ5 1256 aa24■■□□□ 1.43
CSPG5-203ENST00000456150 A0A087WZG4 1122 aa23.99■■□□□ 1.43
CSPG5-203ENST00000456150 PIP4K2AP48426 406 aaPredicted RBP23.99■■□□□ 1.43
CSPG5-203ENST00000456150 CNPY2Q9Y2B0 182 aa23.99■■□□□ 1.43
CSPG5-203ENST00000456150 TFCP2Q12800 502 aa23.98■■□□□ 1.43
CSPG5-203ENST00000456150 BLOC1S2Q6QNY1 142 aa23.98■■□□□ 1.43
CSPG5-203ENST00000456150 ALDH8A1Q9H2A2 487 aaPredicted RBP23.98■■□□□ 1.43
CSPG5-203ENST00000456150 DBNLQ9UJU6 430 aaKnown RBP23.98■■□□□ 1.43
CSPG5-203ENST00000456150 IL2RBP14784 551 aa23.98■■□□□ 1.43
CSPG5-203ENST00000456150 UBE2HP62256 183 aa23.98■■□□□ 1.43
CSPG5-203ENST00000456150 PCDH11XQ9BZA7 1347 aa23.98■■□□□ 1.43
CSPG5-203ENST00000456150 PCDH11YQ9BZA8 1340 aa23.98■■□□□ 1.43
CSPG5-203ENST00000456150 MSNP26038 577 aaKnown RBP23.97■■□□□ 1.43
CSPG5-203ENST00000456150 ME3Q16798 604 aa23.97■■□□□ 1.43
CSPG5-203ENST00000456150 UBR2Q8IWV8 1755 aa23.97■■□□□ 1.43
CSPG5-203ENST00000456150 ATP5J2-PTCD1G3V325 749 aa23.96■■□□□ 1.43
CSPG5-203ENST00000456150 PTCD1O75127 700 aaKnown RBP23.96■■□□□ 1.43
CSPG5-203ENST00000456150 LETM1O95202 739 aaPredicted RBP23.96■■□□□ 1.43
CSPG5-203ENST00000456150 CASP7P55210 303 aa23.96■■□□□ 1.43
CSPG5-203ENST00000456150 TSGA10IPQ3SY00 556 aa23.96■■□□□ 1.43
CSPG5-203ENST00000456150 CCDC183Q5T5S1 534 aa23.96■■□□□ 1.43
CSPG5-203ENST00000456150 PLCH1Q4KWH8 1693 aa23.96■■□□□ 1.43
CSPG5-203ENST00000456150 JARID2Q92833 1246 aaPredicted RBP23.96■■□□□ 1.43
CSPG5-203ENST00000456150 MTMR6Q9Y217 621 aa23.96■■□□□ 1.43
CSPG5-203ENST00000456150 ZCRB1Q8TBF4 217 aaKnown RBP23.95■■□□□ 1.42
CSPG5-203ENST00000456150 NAP1L5Q96NT1 182 aaPredicted RBP23.95■■□□□ 1.42
CSPG5-203ENST00000456150 TPCN1Q9ULQ1 816 aa23.95■■□□□ 1.42
CSPG5-203ENST00000456150 NUP188Q5SRE5 1749 aa23.95■■□□□ 1.42
CSPG5-203ENST00000456150 RPS6KB1P23443 525 aa23.95■■□□□ 1.42
CSPG5-203ENST00000456150 KRT32Q14532 448 aa23.95■■□□□ 1.42
CSPG5-203ENST00000456150 KLHL34Q8N239 644 aa23.95■■□□□ 1.42
CSPG5-203ENST00000456150 TAF5LO75529 589 aa23.94■■□□□ 1.42
CSPG5-203ENST00000456150 ST3GAL1Q11201 340 aa23.94■■□□□ 1.42
CSPG5-203ENST00000456150 ZNF589Q86UQ0 364 aaPredicted RBP23.94■■□□□ 1.42
CSPG5-203ENST00000456150 ERVV-2B6SEH9 535 aa23.93■■□□□ 1.42
CSPG5-203ENST00000456150 USPL1Q5W0Q7 1092 aa23.93■■□□□ 1.42
CSPG5-203ENST00000456150 DDX54Q8TDD1 881 aaKnown RBP23.93■■□□□ 1.42
CSPG5-203ENST00000456150 PDCP20941 246 aa23.93■■□□□ 1.42
CSPG5-203ENST00000456150 FAM184AQ8NB25 1140 aa23.93■■□□□ 1.42
CSPG5-203ENST00000456150 HAUS7Q99871 368 aa23.93■■□□□ 1.42
CSPG5-203ENST00000456150 H7C1W4 665 aa23.92■■□□□ 1.42
CSPG5-203ENST00000456150 LMBR1LQ6UX01 489 aa23.92■■□□□ 1.42
CSPG5-203ENST00000456150 SHANK3Q9BYB0 1731 aa23.92■■□□□ 1.42
CSPG5-203ENST00000456150 PAPPAQ13219 1627 aa23.92■■□□□ 1.42
CSPG5-203ENST00000456150 FIBPO43427 364 aa23.91■■□□□ 1.42
CSPG5-203ENST00000456150 NECAB1Q8N987 351 aa23.91■■□□□ 1.42
CSPG5-203ENST00000456150 EDC3Q96F86 508 aaKnown RBP23.91■■□□□ 1.42
CSPG5-203ENST00000456150 CWC25Q9NXE8 425 aaPredicted RBP23.91■■□□□ 1.42
CSPG5-203ENST00000456150 VPS37CA5D8V6 355 aaPredicted RBP23.91■■□□□ 1.42
CSPG5-203ENST00000456150 RNF214Q8ND24 703 aa23.91■■□□□ 1.42
CSPG5-203ENST00000456150 DBNDD2Q9BQY9 259 aa23.91■■□□□ 1.42
CSPG5-203ENST00000456150 NOL7Q9UMY1 257 aaKnown RBP23.91■■□□□ 1.42
CSPG5-203ENST00000456150 NBPF26B4DH59 902 aa23.9■■□□□ 1.42
CSPG5-203ENST00000456150 FOXO4P98177 505 aa23.9■■□□□ 1.42
CSPG5-203ENST00000456150 NBPF14Q5TI25 921 aa23.9■■□□□ 1.42
CSPG5-203ENST00000456150 NBPF10Q6P3W6 841 aaKnown RBP23.9■■□□□ 1.42
CSPG5-203ENST00000456150 NBPF15Q8N660 670 aa23.9■■□□□ 1.42
CSPG5-203ENST00000456150 U3KPZ7 1027 aaPredicted RBP23.9■■□□□ 1.42
CSPG5-203ENST00000456150 TJP1Q07157 1748 aa23.9■■□□□ 1.42
CSPG5-203ENST00000456150 NRAPQ86VF7 1730 aa23.9■■□□□ 1.42
CSPG5-203ENST00000456150 LARP1BQ659C4 914 aaKnown RBP23.9■■□□□ 1.42
CSPG5-203ENST00000456150 DNAJC2Q99543 621 aaKnown RBP23.9■■□□□ 1.42
CSPG5-203ENST00000456150 UVSSAQ2YD98 709 aa23.89■■□□□ 1.41
CSPG5-203ENST00000456150 TICAM2Q86XR7 235 aa23.89■■□□□ 1.41
CSPG5-203ENST00000456150 GPR108Q9NPR9 543 aa23.89■■□□□ 1.41
CSPG5-203ENST00000456150 CCDC39Q9UFE4 941 aa23.89■■□□□ 1.41
CSPG5-203ENST00000456150 KCPQ6ZWJ8 1503 aa23.89■■□□□ 1.41
CSPG5-203ENST00000456150 DNM1Q05193 864 aaKnown RBP23.88■■□□□ 1.41
CSPG5-203ENST00000456150 CHMP3Q9Y3E7 222 aa23.88■■□□□ 1.41
CSPG5-203ENST00000456150 ZNF609O15014 1411 aa23.88■■□□□ 1.41
CSPG5-203ENST00000456150 TOB2Q14106 344 aaPredicted RBP23.88■■□□□ 1.41
CSPG5-203ENST00000456150 NKX1-1Q15270 411 aaPredicted RBP23.88■■□□□ 1.41
CSPG5-203ENST00000456150 MCMDC2Q4G0Z9 681 aa23.88■■□□□ 1.41
CSPG5-203ENST00000456150 DISP2A7MBM2 1401 aa23.87■■□□□ 1.41
CSPG5-203ENST00000456150 MCM5P33992 734 aa23.87■■□□□ 1.41
CSPG5-203ENST00000456150 TTLL7Q6ZT98 887 aa23.87■■□□□ 1.41
CSPG5-203ENST00000456150 KBTBD3Q8NAB2 608 aa23.87■■□□□ 1.41
CSPG5-203ENST00000456150 CCDC191Q8NCU4 936 aa23.87■■□□□ 1.41
CSPG5-203ENST00000456150 SH3TC1Q8TE82 1336 aa23.86■■□□□ 1.41
CSPG5-203ENST00000456150 PALLDQ8WX93 1383 aa23.86■■□□□ 1.41
CSPG5-203ENST00000456150 IL15P40933 162 aaPredicted RBP23.86■■□□□ 1.41
CSPG5-203ENST00000456150 TAF6LQ9Y6J9 622 aa23.86■■□□□ 1.41
CSPG5-203ENST00000456150 NEK1Q96PY6 1258 aa23.85■■□□□ 1.41
CSPG5-203ENST00000456150 SLIT2O94813 1529 aa23.85■■□□□ 1.41
CSPG5-203ENST00000456150 KRT85P78386 507 aa23.85■■□□□ 1.41
CSPG5-203ENST00000456150 TCEANC2Q96MN5 208 aa23.85■■□□□ 1.41
CSPG5-203ENST00000456150 HSPA1LP34931 641 aa23.84■■□□□ 1.41
CSPG5-203ENST00000456150 ATG9AQ7Z3C6 839 aa23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms