RNA–Protein interactions for RNA: ENST00000455904.5

HDAC11-215, Transcript of histone deacetylase 11, humanhuman

TSL 2

Gene HDAC11, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-215ENST00000455904 MAP2K2P36507 400 aa23.42■■□□□ 1.34
HDAC11-215ENST00000455904 HSP90AB3PQ58FF7 597 aa23.42■■□□□ 1.34
HDAC11-215ENST00000455904 CIAPIN1Q6FI81 312 aa23.42■■□□□ 1.34
HDAC11-215ENST00000455904 NLRP10Q86W26 655 aa23.42■■□□□ 1.34
HDAC11-215ENST00000455904 MPNDQ8N594 471 aa23.42■■□□□ 1.34
HDAC11-215ENST00000455904 GLIS2Q9BZE0 524 aaPredicted RBP23.42■■□□□ 1.34
HDAC11-215ENST00000455904 BABAM1Q9NWV8 329 aa23.42■■□□□ 1.34
HDAC11-215ENST00000455904 AOC2O75106 756 aa23.41■■□□□ 1.34
HDAC11-215ENST00000455904 CELF2O95319 508 aaKnown RBP23.41■■□□□ 1.34
HDAC11-215ENST00000455904 HCLS1P14317 486 aaPredicted RBP23.41■■□□□ 1.34
HDAC11-215ENST00000455904 PGAP2Q9UHJ9 254 aa23.41■■□□□ 1.34
HDAC11-215ENST00000455904 FAM161AQ3B820 660 aa23.4■■□□□ 1.34
HDAC11-215ENST00000455904 HHIPL1Q96JK4 782 aa23.4■■□□□ 1.34
HDAC11-215ENST00000455904 SH3TC1Q8TE82 1336 aa23.39■■□□□ 1.34
HDAC11-215ENST00000455904 COL4A1P02462 1669 aa23.39■■□□□ 1.34
HDAC11-215ENST00000455904 RAD17O75943 681 aa23.39■■□□□ 1.33
HDAC11-215ENST00000455904 RIPK4P57078 832 aa23.39■■□□□ 1.33
HDAC11-215ENST00000455904 GRAPQ13588 217 aa23.39■■□□□ 1.33
HDAC11-215ENST00000455904 TNIP1Q15025 636 aa23.39■■□□□ 1.33
HDAC11-215ENST00000455904 DDX46Q7L014 1031 aaKnown RBP23.39■■□□□ 1.33
HDAC11-215ENST00000455904 COPS6Q7L5N1 327 aa23.39■■□□□ 1.33
HDAC11-215ENST00000455904 GRAPLQ8TC17 118 aaPredicted RBP23.39■■□□□ 1.33
HDAC11-215ENST00000455904 XAGE3Q8WTP9 111 aa23.39■■□□□ 1.33
HDAC11-215ENST00000455904 ZC3H15Q8WU90 426 aaKnown RBP23.39■■□□□ 1.33
HDAC11-215ENST00000455904 TSKSQ9UJT2 592 aa23.39■■□□□ 1.33
HDAC11-215ENST00000455904 SCN9AQ15858 1988 aa23.38■■□□□ 1.33
HDAC11-215ENST00000455904 TRPM4Q8TD43 1214 aa23.38■■□□□ 1.33
HDAC11-215ENST00000455904 BCL2L13Q9BXK5 485 aa23.38■■□□□ 1.33
HDAC11-215ENST00000455904 YDJCA8MPS7 323 aa23.37■■□□□ 1.33
HDAC11-215ENST00000455904 CA12O43570 354 aa23.37■■□□□ 1.33
HDAC11-215ENST00000455904 HIRAP54198 1017 aaPredicted RBP23.37■■□□□ 1.33
HDAC11-215ENST00000455904 LMOD3Q0VAK6 560 aa23.37■■□□□ 1.33
HDAC11-215ENST00000455904 AIMP1Q12904 312 aaKnown RBP23.37■■□□□ 1.33
HDAC11-215ENST00000455904 TCIRG1Q13488 830 aa23.37■■□□□ 1.33
HDAC11-215ENST00000455904 NECTIN2Q92692 538 aa23.37■■□□□ 1.33
HDAC11-215ENST00000455904 TRMT112Q9UI30 125 aaKnown RBP23.37■■□□□ 1.33
HDAC11-215ENST00000455904 PSME4Q14997 1843 aa23.37■■□□□ 1.33
HDAC11-215ENST00000455904 AKAP11Q9UKA4 1901 aa23.37■■□□□ 1.33
HDAC11-215ENST00000455904 BRPF1P55201 1214 aaPredicted RBP23.36■■□□□ 1.33
HDAC11-215ENST00000455904 TMC4Q7Z404 712 aa23.36■■□□□ 1.33
HDAC11-215ENST00000455904 SHTN1A0MZ66 631 aa23.35■■□□□ 1.33
HDAC11-215ENST00000455904 TMPOP42166 694 aaKnown RBP23.35■■□□□ 1.33
HDAC11-215ENST00000455904 ZNF408Q9H9D4 720 aa23.35■■□□□ 1.33
HDAC11-215ENST00000455904 PDE4DIPQ5VU43 2346 aa23.34■■□□□ 1.33
HDAC11-215ENST00000455904 CCDC85CA6NKD9 419 aa23.34■■□□□ 1.33
HDAC11-215ENST00000455904 CDC37L1Q7L3B6 337 aa23.34■■□□□ 1.33
HDAC11-215ENST00000455904 CNOT7Q9UIV1 285 aaKnown RBP23.34■■□□□ 1.33
HDAC11-215ENST00000455904 MICALL2Q8IY33 904 aa23.33■■□□□ 1.33
HDAC11-215ENST00000455904 KRT24Q2M2I5 525 aa23.32■■□□□ 1.32
HDAC11-215ENST00000455904 H7C1D1 291 aa23.31■■□□□ 1.32
HDAC11-215ENST00000455904 CHPF2Q9P2E5 772 aa23.31■■□□□ 1.32
HDAC11-215ENST00000455904 RGS19P49795 217 aa23.3■■□□□ 1.32
HDAC11-215ENST00000455904 DPF2Q92785 391 aa23.3■■□□□ 1.32
HDAC11-215ENST00000455904 PSMD14O00487 310 aa23.29■■□□□ 1.32
HDAC11-215ENST00000455904 CHL1O00533 1208 aa23.29■■□□□ 1.32
HDAC11-215ENST00000455904 MLLT1Q03111 559 aaPredicted RBP23.29■■□□□ 1.32
HDAC11-215ENST00000455904 NOGQ13253 232 aa23.29■■□□□ 1.32
HDAC11-215ENST00000455904 PLBD2Q8NHP8 589 aa23.29■■□□□ 1.32
HDAC11-215ENST00000455904 ZNF428Q96B54 188 aa23.29■■□□□ 1.32
HDAC11-215ENST00000455904 ZBTB12Q9Y330 459 aaPredicted RBP23.29■■□□□ 1.32
HDAC11-215ENST00000455904 SLC34A2O95436 690 aa23.28■■□□□ 1.32
HDAC11-215ENST00000455904 WASHC4Q2M389 1173 aa23.28■■□□□ 1.32
HDAC11-215ENST00000455904 USP48Q86UV5 1035 aa23.28■■□□□ 1.32
HDAC11-215ENST00000455904 CELF1Q92879 486 aaKnown RBP23.28■■□□□ 1.32
HDAC11-215ENST00000455904 ISCA1Q9BUE6 129 aa23.28■■□□□ 1.32
HDAC11-215ENST00000455904 MCOLN1Q9GZU1 580 aa23.28■■□□□ 1.32
HDAC11-215ENST00000455904 DBNDD1Q9H9R9 158 aa23.28■■□□□ 1.32
HDAC11-215ENST00000455904 HUNKP57058 714 aa23.27■■□□□ 1.32
HDAC11-215ENST00000455904 SF3B3Q15393 1217 aaKnown RBP23.27■■□□□ 1.32
HDAC11-215ENST00000455904 SAMD7Q7Z3H4 446 aa23.27■■□□□ 1.32
HDAC11-215ENST00000455904 NSFL1CQ9UNZ2 370 aaKnown RBP23.27■■□□□ 1.32
HDAC11-215ENST00000455904 HOXB7P09629 217 aa23.26■■□□□ 1.31
HDAC11-215ENST00000455904 RALBP1Q15311 655 aa23.26■■□□□ 1.31
HDAC11-215ENST00000455904 HDGFL1Q5TGJ6 251 aa23.26■■□□□ 1.31
HDAC11-215ENST00000455904 FAM89AQ96GI7 184 aa23.26■■□□□ 1.31
HDAC11-215ENST00000455904 ZIC5Q96T25 663 aa23.26■■□□□ 1.31
HDAC11-215ENST00000455904 RTL9Q8NET4 1388 aa23.26■■□□□ 1.31
HDAC11-215ENST00000455904 TNRC18O15417 2968 aaPredicted RBP23.25■■□□□ 1.31
HDAC11-215ENST00000455904 EGFRP00533 1210 aa23.25■■□□□ 1.31
HDAC11-215ENST00000455904 RPS12P25398 132 aaKnown RBP23.25■■□□□ 1.31
HDAC11-215ENST00000455904 GPSM2P81274 684 aa23.25■■□□□ 1.31
HDAC11-215ENST00000455904 TBC1D10BQ4KMP7 808 aaPredicted RBP23.25■■□□□ 1.31
HDAC11-215ENST00000455904 DLK2Q6UY11 383 aa23.25■■□□□ 1.31
HDAC11-215ENST00000455904 KRT26Q7Z3Y9 468 aa23.25■■□□□ 1.31
HDAC11-215ENST00000455904 POLLQ9UGP5 575 aa23.25■■□□□ 1.31
HDAC11-215ENST00000455904 MYH3P11055 1940 aa23.25■■□□□ 1.31
HDAC11-215ENST00000455904 SPEF2Q9C093 1822 aa23.24■■□□□ 1.31
HDAC11-215ENST00000455904 ATP5J2-PTCD1G3V325 749 aa23.24■■□□□ 1.31
HDAC11-215ENST00000455904 ECE2O60344 883 aa23.24■■□□□ 1.31
HDAC11-215ENST00000455904 NEUROD2Q15784 382 aa23.24■■□□□ 1.31
HDAC11-215ENST00000455904 ANKRD13DQ6ZTN6 518 aa23.24■■□□□ 1.31
HDAC11-215ENST00000455904 CCDC146Q8IYE0 955 aa23.24■■□□□ 1.31
HDAC11-215ENST00000455904 DBF4Q9UBU7 674 aaPredicted RBP23.24■■□□□ 1.31
HDAC11-215ENST00000455904 C6orf229H3BNL8 230 aa23.23■■□□□ 1.31
HDAC11-215ENST00000455904 RIMBP2O15034 1052 aa23.23■■□□□ 1.31
HDAC11-215ENST00000455904 GBA2Q9HCG7 927 aaPredicted RBP23.23■■□□□ 1.31
HDAC11-215ENST00000455904 TRIM35Q9UPQ4 493 aa23.23■■□□□ 1.31
HDAC11-215ENST00000455904 LAS1LQ9Y4W2 734 aaKnown RBP23.23■■□□□ 1.31
HDAC11-215ENST00000455904 FAM155AB1AL88 458 aaPredicted RBP23.22■■□□□ 1.31
HDAC11-215ENST00000455904 ADM5C9JUS6 153 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms