RNA–Protein interactions for RNA: ENST00000455853.1

LINC00473-202, long intergenic non-protein coding RNA 473, humanhuman

TSL 1 (best)

Gene LINC00473, Length 1,822 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473-202ENST00000455853 TTC6Q86TZ1 520 aa15.22■□□□□ 0.03
LINC00473-202ENST00000455853 TNMDQ9H2S6 317 aa15.22■□□□□ 0.03
LINC00473-202ENST00000455853 KCNF1Q9H3M0 494 aa15.22■□□□□ 0.03
LINC00473-202ENST00000455853 CLSTN2Q9H4D0 955 aa15.22■□□□□ 0.03
LINC00473-202ENST00000455853 ALS2Q96Q42 1657 aa15.21■□□□□ 0.03
LINC00473-202ENST00000455853 MRC1P22897 1456 aa15.21■□□□□ 0.03
LINC00473-202ENST00000455853 MYH15Q9Y2K3 1946 aa15.21■□□□□ 0.03
LINC00473-202ENST00000455853 SLC27A2O14975 620 aa15.21■□□□□ 0.03
LINC00473-202ENST00000455853 AMOTQ4VCS5 1084 aa15.21■□□□□ 0.03
LINC00473-202ENST00000455853 TDRD7Q8NHU6 1098 aaKnown RBP15.21■□□□□ 0.03
LINC00473-202ENST00000455853 ANKRD7Q92527 254 aa15.21■□□□□ 0.03
LINC00473-202ENST00000455853 BCL2L12Q9HB09 334 aa15.21■□□□□ 0.03
LINC00473-202ENST00000455853 MRVI1Q9Y6F6 885 aa15.21■□□□□ 0.03
LINC00473-202ENST00000455853 NFAT5O94916 1531 aa15.2■□□□□ 0.02
LINC00473-202ENST00000455853 NEMFO60524 1076 aa15.2■□□□□ 0.02
LINC00473-202ENST00000455853 RPS6KB1P23443 525 aa15.2■□□□□ 0.02
LINC00473-202ENST00000455853 DMTNQ08495 405 aa15.2■□□□□ 0.02
LINC00473-202ENST00000455853 ST3GAL1Q11201 340 aa15.2■□□□□ 0.02
LINC00473-202ENST00000455853 G3BP1Q13283 466 aaKnown RBP eCLIP15.2■□□□□ 0.02
LINC00473-202ENST00000455853 PLEKHO1Q53GL0 409 aaPredicted RBP15.2■□□□□ 0.02
LINC00473-202ENST00000455853 SPATA32Q96LK8 384 aa15.2■□□□□ 0.02
LINC00473-202ENST00000455853 TPCN1Q9ULQ1 816 aa15.2■□□□□ 0.02
LINC00473-202ENST00000455853 MED23Q9ULK4 1368 aa15.2■□□□□ 0.02
LINC00473-202ENST00000455853 SIPA1L3O60292 1781 aaPredicted RBP15.2■□□□□ 0.02
LINC00473-202ENST00000455853 DDX58O95786 925 aaKnown RBP15.2■□□□□ 0.02
LINC00473-202ENST00000455853 CPA1P15085 419 aa15.2■□□□□ 0.02
LINC00473-202ENST00000455853 AACSQ86V21 672 aa15.2■□□□□ 0.02
LINC00473-202ENST00000455853 PDCL2Q8N4E4 241 aa15.2■□□□□ 0.02
LINC00473-202ENST00000455853 GJD4Q96KN9 370 aaPredicted RBP15.2■□□□□ 0.02
LINC00473-202ENST00000455853 FEZ1Q99689 392 aa15.2■□□□□ 0.02
LINC00473-202ENST00000455853 PYCARDQ9ULZ3 195 aa15.2■□□□□ 0.02
LINC00473-202ENST00000455853 BTBD11A6QL63 1104 aa15.19■□□□□ 0.02
LINC00473-202ENST00000455853 SMTNL1A8MU46 457 aa15.19■□□□□ 0.02
LINC00473-202ENST00000455853 AP5Z1O43299 807 aa15.19■□□□□ 0.02
LINC00473-202ENST00000455853 TICAM2Q86XR7 235 aa15.19■□□□□ 0.02
LINC00473-202ENST00000455853 ABTB2Q8N961 1025 aa15.19■□□□□ 0.02
LINC00473-202ENST00000455853 LINS1Q8NG48 757 aa15.19■□□□□ 0.02
LINC00473-202ENST00000455853 ZSCAN16Q9H4T2 348 aaPredicted RBP15.19■□□□□ 0.02
LINC00473-202ENST00000455853 PAXBP1Q9Y5B6 917 aa15.19■□□□□ 0.02
LINC00473-202ENST00000455853 ABCA3Q99758 1704 aa15.19■□□□□ 0.02
LINC00473-202ENST00000455853 HEG1Q9ULI3 1381 aa15.18■□□□□ 0.02
LINC00473-202ENST00000455853 RIOK3O14730 519 aaKnown RBP15.18■□□□□ 0.02
LINC00473-202ENST00000455853 CTAGE5O15320 804 aa15.18■□□□□ 0.02
LINC00473-202ENST00000455853 NMIQ13287 307 aaPredicted RBP15.18■□□□□ 0.02
LINC00473-202ENST00000455853 PLA2G4DQ86XP0 818 aa15.18■□□□□ 0.02
LINC00473-202ENST00000455853 UPF1Q92900 1129 aaKnown RBP eCLIP15.18■□□□□ 0.02
LINC00473-202ENST00000455853 CHMP4CQ96CF2 233 aa15.18■□□□□ 0.02
LINC00473-202ENST00000455853 ZNF75DP51815 510 aa15.17■□□□□ 0.02
LINC00473-202ENST00000455853 ATL3Q6DD88 541 aa15.17■□□□□ 0.02
LINC00473-202ENST00000455853 CDC37L1Q7L3B6 337 aa15.17■□□□□ 0.02
LINC00473-202ENST00000455853 KCNH5Q8NCM2 988 aa15.17■□□□□ 0.02
LINC00473-202ENST00000455853 LEO1Q8WVC0 666 aaPredicted RBP15.17■□□□□ 0.02
LINC00473-202ENST00000455853 LARP6Q9BRS8 491 aaKnown RBP15.17■□□□□ 0.02
LINC00473-202ENST00000455853 CBX8Q9HC52 389 aa15.17■□□□□ 0.02
LINC00473-202ENST00000455853 CFAP45Q9UL16 551 aa15.17■□□□□ 0.02
LINC00473-202ENST00000455853 LIG1P18858 919 aa15.17■□□□□ 0.02
LINC00473-202ENST00000455853 SPC24Q8NBT2 197 aa15.17■□□□□ 0.02
LINC00473-202ENST00000455853 BTG4Q9NY30 223 aa15.17■□□□□ 0.02
LINC00473-202ENST00000455853 DACT1Q9NYF0 836 aa15.17■□□□□ 0.02
LINC00473-202ENST00000455853 MAP3K2Q9Y2U5 619 aa15.17■□□□□ 0.02
LINC00473-202ENST00000455853 ADAMTS7Q9UKP4 1686 aa15.17■□□□□ 0.02
LINC00473-202ENST00000455853 CAMTA1Q9Y6Y1 1673 aa15.17■□□□□ 0.02
LINC00473-202ENST00000455853 GRM8O00222 908 aa15.16■□□□□ 0.02
LINC00473-202ENST00000455853 ANO6Q4KMQ2 910 aa15.16■□□□□ 0.02
LINC00473-202ENST00000455853 PPP4R3BQ5MIZ7 849 aa15.16■□□□□ 0.02
LINC00473-202ENST00000455853 USPL1Q5W0Q7 1092 aa15.16■□□□□ 0.02
LINC00473-202ENST00000455853 SARM1Q6SZW1 724 aa15.16■□□□□ 0.02
LINC00473-202ENST00000455853 C17orf53Q8N3J3 647 aaPredicted RBP15.16■□□□□ 0.02
LINC00473-202ENST00000455853 MPNDQ8N594 471 aa15.16■□□□□ 0.02
LINC00473-202ENST00000455853 NECAB1Q8N987 351 aa15.16■□□□□ 0.02
LINC00473-202ENST00000455853 LTV1Q96GA3 475 aaPredicted RBP15.16■□□□□ 0.02
LINC00473-202ENST00000455853 FSD1Q9BTV5 496 aa15.16■□□□□ 0.02
LINC00473-202ENST00000455853 ZC3H6P61129 1189 aaKnown RBP15.15■□□□□ 0.02
LINC00473-202ENST00000455853 VPS72Q15906 364 aa15.15■□□□□ 0.02
LINC00473-202ENST00000455853 ZNF530Q6P9A1 599 aaPredicted RBP15.15■□□□□ 0.02
LINC00473-202ENST00000455853 DRC7Q8IY82 874 aa15.15■□□□□ 0.02
LINC00473-202ENST00000455853 LLPHQ9BRT6 129 aaKnown RBP15.15■□□□□ 0.02
LINC00473-202ENST00000455853 TRIM5Q9C035 493 aa15.15■□□□□ 0.02
LINC00473-202ENST00000455853 PRDM11Q9NQV5 511 aa15.15■□□□□ 0.02
LINC00473-202ENST00000455853 KIF20AO95235 890 aa15.15■□□□□ 0.02
LINC00473-202ENST00000455853 PTGS1P23219 599 aa15.15■□□□□ 0.02
LINC00473-202ENST00000455853 CHRNA2Q15822 529 aa15.15■□□□□ 0.02
LINC00473-202ENST00000455853 C1orf141Q5JVX7 400 aa15.15■□□□□ 0.02
LINC00473-202ENST00000455853 LGR6Q9HBX8 967 aa15.15■□□□□ 0.02
LINC00473-202ENST00000455853 CCDC9Q9Y3X0 531 aaKnown RBP15.15■□□□□ 0.02
LINC00473-202ENST00000455853 U3KPZ7 1027 aaPredicted RBP15.15■□□□□ 0.02
LINC00473-202ENST00000455853 RGPD2P0DJD1 1756 aa15.15■□□□□ 0.02
LINC00473-202ENST00000455853 RNMTO43148 476 aaKnown RBP15.14■□□□□ 0.01
LINC00473-202ENST00000455853 TOB2Q14106 344 aaPredicted RBP15.14■□□□□ 0.01
LINC00473-202ENST00000455853 DHX8Q14562 1220 aaKnown RBP15.14■□□□□ 0.01
LINC00473-202ENST00000455853 CCDC186Q7Z3E2 898 aa15.14■□□□□ 0.01
LINC00473-202ENST00000455853 GTF3C6Q969F1 213 aa15.14■□□□□ 0.01
LINC00473-202ENST00000455853 FAM227BQ96M60 508 aa15.14■□□□□ 0.01
LINC00473-202ENST00000455853 CGNQ9P2M7 1197 aaKnown RBP15.14■□□□□ 0.01
LINC00473-202ENST00000455853 GLI3P10071 1580 aa15.13■□□□□ 0.01
LINC00473-202ENST00000455853 SASH1O94885 1247 aa15.13■□□□□ 0.01
LINC00473-202ENST00000455853 HMGB1P09429 215 aaKnown RBP15.13■□□□□ 0.01
LINC00473-202ENST00000455853 ZSCAN20P17040 1043 aaPredicted RBP15.13■□□□□ 0.01
LINC00473-202ENST00000455853 ZNF165P49910 485 aa15.13■□□□□ 0.01
LINC00473-202ENST00000455853 ZSCAN25Q6NSZ9 544 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms