RNA–Protein interactions for RNA: ENST00000455730.2

LDHBP1-201, Transcript of lactate dehydrogenase B pseudogene 1, humanhuman

BASIC

Gene LDHBP1, Length 1,119 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHBP1-201ENST00000455730 ERVV-1B6SEH8 477 aa18.55■□□□□ 0.56
LDHBP1-201ENST00000455730 KIAA2012Q0VF49 1180 aa18.55■□□□□ 0.56
LDHBP1-201ENST00000455730 CNGB1Q14028 1251 aaPredicted RBP18.55■□□□□ 0.56
LDHBP1-201ENST00000455730 PKN2Q16513 984 aaKnown RBP18.55■□□□□ 0.56
LDHBP1-201ENST00000455730 MAP3K15Q6ZN16 1313 aa18.54■□□□□ 0.56
LDHBP1-201ENST00000455730 ADM5C9JUS6 153 aa18.54■□□□□ 0.56
LDHBP1-201ENST00000455730 DPP8Q6V1X1 898 aaPredicted RBP18.54■□□□□ 0.56
LDHBP1-201ENST00000455730 SAMD7Q7Z3H4 446 aa18.54■□□□□ 0.56
LDHBP1-201ENST00000455730 YDJCA8MPS7 323 aa18.53■□□□□ 0.56
LDHBP1-201ENST00000455730 PHACTR3Q96KR7 559 aa18.53■□□□□ 0.56
LDHBP1-201ENST00000455730 HDAC9Q9UKV0 1011 aa18.53■□□□□ 0.56
LDHBP1-201ENST00000455730 ZBTB12Q9Y330 459 aaPredicted RBP18.53■□□□□ 0.56
LDHBP1-201ENST00000455730 LAMB4A4D0S4 1761 aa18.53■□□□□ 0.56
LDHBP1-201ENST00000455730 ABCC4O15439 1325 aa18.52■□□□□ 0.56
LDHBP1-201ENST00000455730 NTSR2O95665 410 aa18.52■□□□□ 0.56
LDHBP1-201ENST00000455730 EGFRP00533 1210 aa18.52■□□□□ 0.56
LDHBP1-201ENST00000455730 TBC1D10BQ4KMP7 808 aaPredicted RBP18.52■□□□□ 0.56
LDHBP1-201ENST00000455730 KIF6Q6ZMV9 814 aa18.51■□□□□ 0.55
LDHBP1-201ENST00000455730 TTLL7Q6ZT98 887 aa18.51■□□□□ 0.55
LDHBP1-201ENST00000455730 MCM10Q7L590 875 aa18.51■□□□□ 0.55
LDHBP1-201ENST00000455730 MPNDQ8N594 471 aa18.51■□□□□ 0.55
LDHBP1-201ENST00000455730 NLRP3Q96P20 1036 aa18.51■□□□□ 0.55
LDHBP1-201ENST00000455730 PRKAR2BP31323 418 aa18.5■□□□□ 0.55
LDHBP1-201ENST00000455730 REM2Q8IYK8 340 aaPredicted RBP18.5■□□□□ 0.55
LDHBP1-201ENST00000455730 ZNF296Q8WUU4 475 aaPredicted RBP18.5■□□□□ 0.55
LDHBP1-201ENST00000455730 DPF2Q92785 391 aa18.5■□□□□ 0.55
LDHBP1-201ENST00000455730 DCPSQ96C86 337 aaKnown RBP18.5■□□□□ 0.55
LDHBP1-201ENST00000455730 ZBTB3Q9H5J0 574 aa18.5■□□□□ 0.55
LDHBP1-201ENST00000455730 RASAL3Q86YV0 1011 aa18.49■□□□□ 0.55
LDHBP1-201ENST00000455730 SP8Q8IXZ3 490 aa18.49■□□□□ 0.55
LDHBP1-201ENST00000455730 ZNF34Q8IZ26 560 aa18.49■□□□□ 0.55
LDHBP1-201ENST00000455730 MKI67P46013 3256 aaKnown RBP18.48■□□□□ 0.55
LDHBP1-201ENST00000455730 RBM26Q5T8P6 1007 aaKnown RBP18.48■□□□□ 0.55
LDHBP1-201ENST00000455730 RTF1Q92541 710 aaKnown RBP18.48■□□□□ 0.55
LDHBP1-201ENST00000455730 PSMD14O00487 310 aa18.47■□□□□ 0.55
LDHBP1-201ENST00000455730 BBOX1O75936 387 aa18.47■□□□□ 0.55
LDHBP1-201ENST00000455730 TBC1D8O95759 1140 aa18.47■□□□□ 0.55
LDHBP1-201ENST00000455730 DCTN1Q14203 1278 aa18.47■□□□□ 0.55
LDHBP1-201ENST00000455730 FBXO46Q6PJ61 603 aaPredicted RBP18.47■□□□□ 0.55
LDHBP1-201ENST00000455730 PPP1R42Q7Z4L9 355 aa18.47■□□□□ 0.55
LDHBP1-201ENST00000455730 RRP7AQ9Y3A4 280 aaKnown RBP18.47■□□□□ 0.55
LDHBP1-201ENST00000455730 FXR1P51114 621 aaKnown RBP eCLIP18.46■□□□□ 0.55
LDHBP1-201ENST00000455730 RSPH6AQ9H0K4 717 aa18.46■□□□□ 0.55
LDHBP1-201ENST00000455730 DUOX1Q9NRD9 1551 aa18.46■□□□□ 0.55
LDHBP1-201ENST00000455730 LAMB2P55268 1798 aa18.45■□□□□ 0.54
LDHBP1-201ENST00000455730 SULF1Q8IWU6 871 aa18.45■□□□□ 0.54
LDHBP1-201ENST00000455730 CDCA5Q96FF9 252 aa18.45■□□□□ 0.54
LDHBP1-201ENST00000455730 GGA3Q9NZ52 723 aa18.45■□□□□ 0.54
LDHBP1-201ENST00000455730 MYL6BP14649 208 aa18.44■□□□□ 0.54
LDHBP1-201ENST00000455730 SLC10A5Q5PT55 438 aa18.44■□□□□ 0.54
LDHBP1-201ENST00000455730 GIGYF2Q6Y7W6 1299 aaKnown RBP18.44■□□□□ 0.54
LDHBP1-201ENST00000455730 DBNDD1Q9H9R9 158 aa18.44■□□□□ 0.54
LDHBP1-201ENST00000455730 MIS18AQ9NYP9 233 aa18.44■□□□□ 0.54
LDHBP1-201ENST00000455730 TAF1P21675 1872 aa18.43■□□□□ 0.54
LDHBP1-201ENST00000455730 ANKRD36CQ5JPF3 1778 aa18.43■□□□□ 0.54
LDHBP1-201ENST00000455730 KIF4BQ2VIQ3 1234 aa18.43■□□□□ 0.54
LDHBP1-201ENST00000455730 PARP10Q53GL7 1025 aa18.43■□□□□ 0.54
LDHBP1-201ENST00000455730 UTP14AQ9BVJ6 771 aaKnown RBP18.43■□□□□ 0.54
LDHBP1-201ENST00000455730 ASTN2O75129 1339 aaPredicted RBP18.43■□□□□ 0.54
LDHBP1-201ENST00000455730 GPR25O00155 361 aa18.42■□□□□ 0.54
LDHBP1-201ENST00000455730 RPS12P25398 132 aaKnown RBP18.42■□□□□ 0.54
LDHBP1-201ENST00000455730 TAF7Q15545 349 aaPredicted RBP18.42■□□□□ 0.54
LDHBP1-201ENST00000455730 PAPPA2Q9BXP8 1791 aa18.42■□□□□ 0.54
LDHBP1-201ENST00000455730 DLG5Q8TDM6 1919 aa18.41■□□□□ 0.54
LDHBP1-201ENST00000455730 GRAPQ13588 217 aa18.41■□□□□ 0.54
LDHBP1-201ENST00000455730 GRAPLQ8TC17 118 aaPredicted RBP18.41■□□□□ 0.54
LDHBP1-201ENST00000455730 KIAA0100Q14667 2235 aaKnown RBP18.41■□□□□ 0.54
LDHBP1-201ENST00000455730 WASHC4Q2M389 1173 aa18.4■□□□□ 0.54
LDHBP1-201ENST00000455730 NOM1Q5C9Z4 860 aaKnown RBP18.4■□□□□ 0.54
LDHBP1-201ENST00000455730 DDX46Q7L014 1031 aaKnown RBP18.4■□□□□ 0.54
LDHBP1-201ENST00000455730 RTL9Q8NET4 1388 aa18.4■□□□□ 0.54
LDHBP1-201ENST00000455730 LRRC37AA6NMS7 1700 aa18.4■□□□□ 0.54
LDHBP1-201ENST00000455730 POTEFA5A3E0 1075 aa18.39■□□□□ 0.53
LDHBP1-201ENST00000455730 HCLS1P14317 486 aaPredicted RBP18.39■□□□□ 0.53
LDHBP1-201ENST00000455730 FKBP1BP68106 108 aa18.39■□□□□ 0.53
LDHBP1-201ENST00000455730 KCNQ5Q9NR82 932 aa18.39■□□□□ 0.53
LDHBP1-201ENST00000455730 KDM3BQ7LBC6 1761 aa18.38■□□□□ 0.53
LDHBP1-201ENST00000455730 RIMBP2O15034 1052 aa18.38■□□□□ 0.53
LDHBP1-201ENST00000455730 PPP2R1AP30153 589 aa18.38■□□□□ 0.53
LDHBP1-201ENST00000455730 MOB2Q70IA6 237 aa18.38■□□□□ 0.53
LDHBP1-201ENST00000455730 HTATSF1O43719 755 aaKnown RBP18.37■□□□□ 0.53
LDHBP1-201ENST00000455730 ECE2O60344 883 aa18.37■□□□□ 0.53
LDHBP1-201ENST00000455730 FKTNO75072 461 aa18.37■□□□□ 0.53
LDHBP1-201ENST00000455730 ANGEL2Q5VTE6 544 aaKnown RBP18.37■□□□□ 0.53
LDHBP1-201ENST00000455730 DDX60Q8IY21 1712 aaKnown RBP18.37■□□□□ 0.53
LDHBP1-201ENST00000455730 SCN9AQ15858 1988 aa18.37■□□□□ 0.53
LDHBP1-201ENST00000455730 TM4SF4P48230 202 aa18.36■□□□□ 0.53
LDHBP1-201ENST00000455730 EIF4A1P60842 406 aaKnown RBP18.36■□□□□ 0.53
LDHBP1-201ENST00000455730 DOK7Q18PE1 504 aa18.36■□□□□ 0.53
LDHBP1-201ENST00000455730 TMC4Q7Z404 712 aa18.36■□□□□ 0.53
LDHBP1-201ENST00000455730 NSFL1CQ9UNZ2 370 aaKnown RBP18.36■□□□□ 0.53
LDHBP1-201ENST00000455730 UBE2Q2LH0YL09 131 aa18.35■□□□□ 0.53
LDHBP1-201ENST00000455730 C6orf229H3BNL8 230 aa18.35■□□□□ 0.53
LDHBP1-201ENST00000455730 R3HDMLQ9H3Y0 253 aa18.35■□□□□ 0.53
LDHBP1-201ENST00000455730 HTTP42858 3142 aa18.34■□□□□ 0.53
LDHBP1-201ENST00000455730 U2AF1L5P0DN76 240 aaPredicted RBP18.34■□□□□ 0.53
LDHBP1-201ENST00000455730 U2AF1Q01081 240 aaKnown RBP eCLIP18.34■□□□□ 0.53
LDHBP1-201ENST00000455730 MKRN3Q13064 507 aaKnown RBP18.34■□□□□ 0.53
LDHBP1-201ENST00000455730 SCARF1Q14162 830 aa18.34■□□□□ 0.53
LDHBP1-201ENST00000455730 PNISRQ8TF01 805 aaKnown RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms