RNA–Protein interactions for RNA: ENST00000455624.6

SCN5A-210, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 1 (best) BASIC

Gene SCN5A, Length 7,170 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-210ENST00000455624 TMEM110-MUSTN1A8MSY1 372 aa11.58□□□□□ -0.56
SCN5A-210ENST00000455624 SPECC1LQ69YQ0 1117 aa11.58□□□□□ -0.56
SCN5A-210ENST00000455624 CEP112Q8N8E3 955 aa11.58□□□□□ -0.56
SCN5A-210ENST00000455624 SNRKQ9NRH2 765 aa11.58□□□□□ -0.56
SCN5A-210ENST00000455624 EMILIN1Q9Y6C2 1016 aa11.58□□□□□ -0.56
SCN5A-210ENST00000455624 WASLO00401 505 aaPredicted RBP11.57□□□□□ -0.56
SCN5A-210ENST00000455624 CALM1P0DP23 149 aa11.57□□□□□ -0.56
SCN5A-210ENST00000455624 CALM2P0DP24 149 aa11.57□□□□□ -0.56
SCN5A-210ENST00000455624 CALM3P0DP25 149 aa11.57□□□□□ -0.56
SCN5A-210ENST00000455624 SMARCC2Q8TAQ2 1214 aa11.57□□□□□ -0.56
SCN5A-210ENST00000455624 UBA7P41226 1012 aa11.57□□□□□ -0.56
SCN5A-210ENST00000455624 NCBP1Q09161 790 aaKnown RBP11.57□□□□□ -0.56
SCN5A-210ENST00000455624 SETDB2Q96T68 719 aa11.57□□□□□ -0.56
SCN5A-210ENST00000455624 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.57□□□□□ -0.56
SCN5A-210ENST00000455624 CCDC155Q8N6L0 562 aa11.57□□□□□ -0.56
SCN5A-210ENST00000455624 ACSBG1Q96GR2 724 aa11.57□□□□□ -0.56
SCN5A-210ENST00000455624 PANK2Q9BZ23 570 aa11.57□□□□□ -0.56
SCN5A-210ENST00000455624 CYP7A1P22680 504 aa11.57□□□□□ -0.56
SCN5A-210ENST00000455624 KIAA0753Q2KHM9 967 aa11.57□□□□□ -0.56
SCN5A-210ENST00000455624 SPATA24Q86W54 205 aa11.56□□□□□ -0.56
SCN5A-210ENST00000455624 HMG20BQ9P0W2 317 aa11.56□□□□□ -0.56
SCN5A-210ENST00000455624 SERPINA10Q9UK55 444 aa11.56□□□□□ -0.56
SCN5A-210ENST00000455624 POLR3GO15318 223 aaPredicted RBP11.56□□□□□ -0.56
SCN5A-210ENST00000455624 DPH6Q7L8W6 267 aa11.56□□□□□ -0.56
SCN5A-210ENST00000455624 TRAF1Q13077 416 aa11.56□□□□□ -0.56
SCN5A-210ENST00000455624 LRSAM1Q6UWE0 723 aa11.56□□□□□ -0.56
SCN5A-210ENST00000455624 EHBP1Q8NDI1 1231 aa11.56□□□□□ -0.56
SCN5A-210ENST00000455624 FAM13AO94988 1023 aa11.56□□□□□ -0.56
SCN5A-210ENST00000455624 ORC3Q9UBD5 711 aaPredicted RBP11.56□□□□□ -0.56
SCN5A-210ENST00000455624 NCAPD3P42695 1498 aa11.56□□□□□ -0.56
SCN5A-210ENST00000455624 GOLGA6L9A6NEM1 432 aa11.56□□□□□ -0.56
SCN5A-210ENST00000455624 FLIIQ13045 1269 aa11.56□□□□□ -0.56
SCN5A-210ENST00000455624 FAM212AQ96EL1 285 aa11.56□□□□□ -0.56
SCN5A-210ENST00000455624 CKAP4Q07065 602 aaKnown RBP11.56□□□□□ -0.56
SCN5A-210ENST00000455624 SSH1Q8WYL5 1049 aa11.56□□□□□ -0.56
SCN5A-210ENST00000455624 ECHDC1Q9NTX5 307 aa11.56□□□□□ -0.56
SCN5A-210ENST00000455624 SNRPA1P09661 255 aaKnown RBP11.55□□□□□ -0.56
SCN5A-210ENST00000455624 SSFA2P28290 1259 aa11.55□□□□□ -0.56
SCN5A-210ENST00000455624 GJC1P36383 396 aa11.55□□□□□ -0.56
SCN5A-210ENST00000455624 RARSP54136 660 aaKnown RBP11.55□□□□□ -0.56
SCN5A-210ENST00000455624 JARID2Q92833 1246 aaPredicted RBP11.55□□□□□ -0.56
SCN5A-210ENST00000455624 TOPBP1Q92547 1522 aa11.55□□□□□ -0.56
SCN5A-210ENST00000455624 B4DLN1 442 aa11.55□□□□□ -0.56
SCN5A-210ENST00000455624 FOXO3O43524 673 aa11.55□□□□□ -0.56
SCN5A-210ENST00000455624 MRPL12P52815 198 aaKnown RBP11.55□□□□□ -0.56
SCN5A-210ENST00000455624 MCM5P33992 734 aa11.55□□□□□ -0.56
SCN5A-210ENST00000455624 GSTA5Q7RTV2 222 aa11.55□□□□□ -0.56
SCN5A-210ENST00000455624 PAIP2Q9BPZ3 127 aaKnown RBP11.55□□□□□ -0.56
SCN5A-210ENST00000455624 IQGAP2Q13576 1575 aa11.55□□□□□ -0.56
SCN5A-210ENST00000455624 SNW1Q13573 536 aaKnown RBP11.55□□□□□ -0.56
SCN5A-210ENST00000455624 SMARCC1Q92922 1105 aaPredicted RBP11.55□□□□□ -0.56
SCN5A-210ENST00000455624 PARP3Q9Y6F1 533 aa11.55□□□□□ -0.56
SCN5A-210ENST00000455624 DNMBPQ6XZF7 1577 aa11.55□□□□□ -0.56
SCN5A-210ENST00000455624 TERF1P54274 439 aa11.55□□□□□ -0.56
SCN5A-210ENST00000455624 NYXQ9GZU5 481 aa11.55□□□□□ -0.56
SCN5A-210ENST00000455624 FAM107BQ9H098 131 aa11.55□□□□□ -0.56
SCN5A-210ENST00000455624 CNNM2Q9H8M5 875 aa11.55□□□□□ -0.56
SCN5A-210ENST00000455624 NDC80O14777 642 aa11.55□□□□□ -0.56
SCN5A-210ENST00000455624 MXRA7P84157 204 aa11.55□□□□□ -0.56
SCN5A-210ENST00000455624 CCDC102BQ68D86 513 aa11.55□□□□□ -0.56
SCN5A-210ENST00000455624 ZSCAN30Q86W11 494 aa11.55□□□□□ -0.56
SCN5A-210ENST00000455624 SELENOOQ9BVL4 669 aa11.55□□□□□ -0.56
SCN5A-210ENST00000455624 VEZTQ9HBM0 779 aa11.55□□□□□ -0.56
SCN5A-210ENST00000455624 MAGI1Q96QZ7 1491 aaPredicted RBP11.54□□□□□ -0.56
SCN5A-210ENST00000455624 MAGEB6P1A0A0J9YX57 407 aa11.54□□□□□ -0.56
SCN5A-210ENST00000455624 PLVAPQ9BX97 442 aa11.54□□□□□ -0.56
SCN5A-210ENST00000455624 IQCGQ9H095 443 aaKnown RBP11.54□□□□□ -0.56
SCN5A-210ENST00000455624 MSH6P52701 1360 aa11.54□□□□□ -0.56
SCN5A-210ENST00000455624 NAPAP54920 295 aa11.54□□□□□ -0.56
SCN5A-210ENST00000455624 CBX1P83916 185 aa11.54□□□□□ -0.56
SCN5A-210ENST00000455624 POLD1P28340 1107 aa11.54□□□□□ -0.56
SCN5A-210ENST00000455624 AFMP43652 599 aa11.54□□□□□ -0.56
SCN5A-210ENST00000455624 APBB1IPQ7Z5R6 666 aaPredicted RBP11.54□□□□□ -0.56
SCN5A-210ENST00000455624 NCOA1Q15788 1441 aa11.54□□□□□ -0.56
SCN5A-210ENST00000455624 TAF12Q16514 161 aa11.54□□□□□ -0.56
SCN5A-210ENST00000455624 CTAGE1Q96RT6 745 aa11.54□□□□□ -0.56
SCN5A-210ENST00000455624 RTL9Q8NET4 1388 aa11.54□□□□□ -0.56
SCN5A-210ENST00000455624 TOP2BQ02880 1626 aa11.54□□□□□ -0.56
SCN5A-210ENST00000455624 WDR97A6NE52 1622 aa11.53□□□□□ -0.56
SCN5A-210ENST00000455624 RTN1Q16799 776 aa11.53□□□□□ -0.56
SCN5A-210ENST00000455624 CCDC50Q8IVM0 306 aa11.53□□□□□ -0.56
SCN5A-210ENST00000455624 CCDC63Q8NA47 563 aa11.53□□□□□ -0.56
SCN5A-210ENST00000455624 IMPG2Q9BZV3 1241 aa11.53□□□□□ -0.56
SCN5A-210ENST00000455624 NSRP1Q9H0G5 558 aaKnown RBP11.53□□□□□ -0.56
SCN5A-210ENST00000455624 RRP36Q96EU6 259 aaKnown RBP11.53□□□□□ -0.56
SCN5A-210ENST00000455624 ECM2O94769 699 aaPredicted RBP11.53□□□□□ -0.56
SCN5A-210ENST00000455624 EEF2P13639 858 aaKnown RBP11.53□□□□□ -0.56
SCN5A-210ENST00000455624 PRPHP41219 470 aa11.53□□□□□ -0.56
SCN5A-210ENST00000455624 OGFOD1Q8N543 542 aa11.53□□□□□ -0.56
SCN5A-210ENST00000455624 KLF18A0A0U1RQI7 1052 aa11.53□□□□□ -0.56
SCN5A-210ENST00000455624 TFIP11Q9UBB9 837 aaKnown RBP11.53□□□□□ -0.56
SCN5A-210ENST00000455624 PCF11O94913 1555 aaKnown RBP11.53□□□□□ -0.56
SCN5A-210ENST00000455624 NSD2O96028 1365 aa11.53□□□□□ -0.56
SCN5A-210ENST00000455624 ESPNB1AK53 854 aa11.53□□□□□ -0.56
SCN5A-210ENST00000455624 UBE3BQ7Z3V4 1068 aa11.53□□□□□ -0.56
SCN5A-210ENST00000455624 CFAP57Q96MR6 1250 aa11.53□□□□□ -0.56
SCN5A-210ENST00000455624 ABCC5O15440 1437 aa11.52□□□□□ -0.56
SCN5A-210ENST00000455624 ZWINTO95229 277 aa11.52□□□□□ -0.56
SCN5A-210ENST00000455624 BMS1Q14692 1282 aaKnown RBP11.52□□□□□ -0.56
SCN5A-210ENST00000455624 STX8Q9UNK0 236 aa11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms