RNA–Protein interactions for RNA: ENST00000455554.2

LINC02540-201, Transcript of long intergenic non-protein coding RNA 2540, humanhuman

TSL 3 BASIC

Gene LINC02540, Length 570 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02540-201ENST00000455554 SLC51AQ86UW1 340 aa5.49□□□□□ -1.53
LINC02540-201ENST00000455554 TRPM4Q8TD43 1214 aa5.49□□□□□ -1.53
LINC02540-201ENST00000455554 TTC9Q92623 222 aa5.49□□□□□ -1.53
LINC02540-201ENST00000455554 COL17A1Q9UMD9 1497 aaPredicted RBP5.48□□□□□ -1.53
LINC02540-201ENST00000455554 PAX4O43316 350 aa5.48□□□□□ -1.53
LINC02540-201ENST00000455554 ADAMTS4O75173 837 aa5.48□□□□□ -1.53
LINC02540-201ENST00000455554 FSTP19883 344 aa5.48□□□□□ -1.53
LINC02540-201ENST00000455554 HFE2Q6ZVN8 426 aa5.48□□□□□ -1.53
LINC02540-201ENST00000455554 DLL1O00548 723 aa5.47□□□□□ -1.53
LINC02540-201ENST00000455554 RAD21O60216 631 aa5.47□□□□□ -1.53
LINC02540-201ENST00000455554 TARSP26639 723 aaKnown RBP5.47□□□□□ -1.53
LINC02540-201ENST00000455554 INPP5BP32019 993 aa5.47□□□□□ -1.53
LINC02540-201ENST00000455554 SEC13P55735 322 aa5.47□□□□□ -1.53
LINC02540-201ENST00000455554 GPLD1P80108 840 aa5.47□□□□□ -1.53
LINC02540-201ENST00000455554 DZIP1LQ8IYY4 767 aaKnown RBP5.47□□□□□ -1.53
LINC02540-201ENST00000455554 IFT43Q96FT9 208 aa5.47□□□□□ -1.53
LINC02540-201ENST00000455554 SMG9Q9H0W8 520 aaKnown RBP5.47□□□□□ -1.53
LINC02540-201ENST00000455554 AKTIPQ9H8T0 292 aa5.47□□□□□ -1.53
LINC02540-201ENST00000455554 USP20Q9Y2K6 914 aa5.47□□□□□ -1.53
LINC02540-201ENST00000455554 RARAP10276 462 aa5.46□□□□□ -1.54
LINC02540-201ENST00000455554 RASA1P20936 1047 aa5.46□□□□□ -1.54
LINC02540-201ENST00000455554 ARID4AP29374 1257 aaPredicted RBP5.46□□□□□ -1.54
LINC02540-201ENST00000455554 IDH3AP50213 366 aa5.46□□□□□ -1.54
LINC02540-201ENST00000455554 HDGFL1Q5TGJ6 251 aa5.46□□□□□ -1.54
LINC02540-201ENST00000455554 C11orf16Q9NQ32 467 aa5.46□□□□□ -1.54
LINC02540-201ENST00000455554 KLK14Q9P0G3 267 aa5.46□□□□□ -1.54
LINC02540-201ENST00000455554 TXKP42681 527 aa5.45□□□□□ -1.54
LINC02540-201ENST00000455554 CD97P48960 835 aa5.45□□□□□ -1.54
LINC02540-201ENST00000455554 ARSDP51689 593 aa5.45□□□□□ -1.54
LINC02540-201ENST00000455554 AGGF1Q8N302 714 aaeCLIP5.45□□□□□ -1.54
LINC02540-201ENST00000455554 TMEM130Q8N3G9 435 aa5.45□□□□□ -1.54
LINC02540-201ENST00000455554 KRTAP4-7Q9BYR0 210 aa5.45□□□□□ -1.54
LINC02540-201ENST00000455554 MRPL18Q9H0U6 180 aaKnown RBP5.45□□□□□ -1.54
LINC02540-201ENST00000455554 OAS3Q9Y6K5 1087 aaKnown RBP5.45□□□□□ -1.54
LINC02540-201ENST00000455554 F8W735 103 aaPredicted RBP5.44□□□□□ -1.54
LINC02540-201ENST00000455554 SASH3O75995 380 aa5.44□□□□□ -1.54
LINC02540-201ENST00000455554 EIF2AK2P19525 551 aaKnown RBP5.44□□□□□ -1.54
LINC02540-201ENST00000455554 IRAK1P51617 712 aa5.44□□□□□ -1.54
LINC02540-201ENST00000455554 NRLP54845 237 aa5.44□□□□□ -1.54
LINC02540-201ENST00000455554 FMNL2Q96PY5 1086 aa5.44□□□□□ -1.54
LINC02540-201ENST00000455554 HINFPQ9BQA5 517 aa5.44□□□□□ -1.54
LINC02540-201ENST00000455554 J3QW42 95 aa5.43□□□□□ -1.54
LINC02540-201ENST00000455554 PTCD1O75127 700 aaKnown RBP5.43□□□□□ -1.54
LINC02540-201ENST00000455554 TGFB1P01137 390 aa5.43□□□□□ -1.54
LINC02540-201ENST00000455554 IGFBP4P22692 258 aa5.43□□□□□ -1.54
LINC02540-201ENST00000455554 DGKZQ13574 1117 aa5.43□□□□□ -1.54
LINC02540-201ENST00000455554 LCE1DQ5T752 114 aa5.43□□□□□ -1.54
LINC02540-201ENST00000455554 DCAF11Q8TEB1 546 aa5.43□□□□□ -1.54
LINC02540-201ENST00000455554 SRA1Q9HD15 236 aaKnown RBP5.43□□□□□ -1.54
LINC02540-201ENST00000455554 GSC2O15499 205 aa5.42□□□□□ -1.54
LINC02540-201ENST00000455554 MICAL2O94851 1124 aa5.42□□□□□ -1.54
LINC02540-201ENST00000455554 LARP1Q6PKG0 1096 aaKnown RBP5.42□□□□□ -1.54
LINC02540-201ENST00000455554 Q6ZS46 218 aa5.42□□□□□ -1.54
LINC02540-201ENST00000455554 PLD4Q96BZ4 506 aa5.42□□□□□ -1.54
LINC02540-201ENST00000455554 TLR7Q9NYK1 1049 aaKnown RBP5.42□□□□□ -1.54
LINC02540-201ENST00000455554 SLC24A1O60721 1099 aa5.41□□□□□ -1.54
LINC02540-201ENST00000455554 YBX3P16989 372 aaKnown RBP eCLIP5.41□□□□□ -1.54
LINC02540-201ENST00000455554 UBTFP17480 764 aaKnown RBP5.41□□□□□ -1.54
LINC02540-201ENST00000455554 TAL1P17542 331 aaPredicted RBP5.41□□□□□ -1.54
LINC02540-201ENST00000455554 TPRNQ4KMQ1 711 aa5.41□□□□□ -1.54
LINC02540-201ENST00000455554 GDF6Q6KF10 455 aaPredicted RBP5.41□□□□□ -1.54
LINC02540-201ENST00000455554 ADAMTSL4Q6UY14 1074 aa5.41□□□□□ -1.54
LINC02540-201ENST00000455554 MAP4K3Q8IVH8 894 aa5.41□□□□□ -1.54
LINC02540-201ENST00000455554 IL22RA1Q8N6P7 574 aa5.41□□□□□ -1.54
LINC02540-201ENST00000455554 UBL7Q96S82 380 aaPredicted RBP5.41□□□□□ -1.54
LINC02540-201ENST00000455554 QTRT2Q9H974 415 aaKnown RBP5.41□□□□□ -1.54
LINC02540-201ENST00000455554 RAXQ9Y2V3 346 aa5.41□□□□□ -1.54
LINC02540-201ENST00000455554 ARID1BQ8NFD5 2236 aaPredicted RBP5.4□□□□□ -1.54
LINC02540-201ENST00000455554 LOC102724428A0A0B4J2F2 783 aa5.4□□□□□ -1.54
LINC02540-201ENST00000455554 KIAA1324LA8MWY0 1029 aaPredicted RBP5.4□□□□□ -1.54
LINC02540-201ENST00000455554 OPLAHO14841 1288 aa5.4□□□□□ -1.54
LINC02540-201ENST00000455554 COBLO75128 1261 aa5.4□□□□□ -1.54
LINC02540-201ENST00000455554 WISP1O95388 367 aa5.4□□□□□ -1.54
LINC02540-201ENST00000455554 EGFRP00533 1210 aa5.4□□□□□ -1.54
LINC02540-201ENST00000455554 IGLV1-40P01703 118 aa5.4□□□□□ -1.54
LINC02540-201ENST00000455554 GLB1P16278 677 aa5.4□□□□□ -1.54
LINC02540-201ENST00000455554 SIK1P57059 783 aa5.4□□□□□ -1.54
LINC02540-201ENST00000455554 DPYDQ12882 1025 aa5.4□□□□□ -1.54
LINC02540-201ENST00000455554 SETDB1Q15047 1291 aa5.4□□□□□ -1.54
LINC02540-201ENST00000455554 C11orf91Q3C1V1 193 aa5.4□□□□□ -1.54
LINC02540-201ENST00000455554 TFIP11Q9UBB9 837 aaKnown RBP5.4□□□□□ -1.54
LINC02540-201ENST00000455554 STOML1Q9UBI4 398 aa5.4□□□□□ -1.54
LINC02540-201ENST00000455554 RTCBQ9Y3I0 505 aaKnown RBP5.4□□□□□ -1.54
LINC02540-201ENST00000455554 MAFBQ9Y5Q3 323 aaPredicted RBP5.4□□□□□ -1.54
LINC02540-201ENST00000455554 XYLBO75191 536 aa5.39□□□□□ -1.55
LINC02540-201ENST00000455554 GHRHP01286 108 aa5.39□□□□□ -1.55
LINC02540-201ENST00000455554 PSAPP07602 524 aa5.39□□□□□ -1.55
LINC02540-201ENST00000455554 GP2P55259 537 aaKnown RBP5.39□□□□□ -1.55
LINC02540-201ENST00000455554 PTK7Q13308 1070 aa5.39□□□□□ -1.55
LINC02540-201ENST00000455554 CRTC2Q53ET0 693 aaPredicted RBP5.39□□□□□ -1.55
LINC02540-201ENST00000455554 ARMC10Q8N2F6 343 aa5.39□□□□□ -1.55
LINC02540-201ENST00000455554 GALNT11Q8NCW6 608 aa5.39□□□□□ -1.55
LINC02540-201ENST00000455554 NSUN5Q96P11 429 aaKnown RBP5.39□□□□□ -1.55
LINC02540-201ENST00000455554 RBSNQ9H1K0 784 aa5.39□□□□□ -1.55
LINC02540-201ENST00000455554 TM4SF5O14894 197 aa5.38□□□□□ -1.55
LINC02540-201ENST00000455554 DHX15O43143 795 aaKnown RBP5.38□□□□□ -1.55
LINC02540-201ENST00000455554 SOX18P35713 384 aa5.38□□□□□ -1.55
LINC02540-201ENST00000455554 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.38□□□□□ -1.55
LINC02540-201ENST00000455554 VTI1AQ96AJ9 217 aa5.38□□□□□ -1.55
LINC02540-201ENST00000455554 MYO19Q96H55 970 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms