RNA–Protein interactions for RNA: ENST00000454947.1

SH3BP4-207, Transcript of SH3 domain binding protein 4, humanhuman

TSL 4

Gene SH3BP4, Length 500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BP4-207ENST00000454947 C3orf67Q6ZVT6 689 aa11.75□□□□□ -0.53
SH3BP4-207ENST00000454947 NUTM1Q86Y26 1132 aa11.75□□□□□ -0.53
SH3BP4-207ENST00000454947 RPAP2Q8IXW5 612 aaPredicted RBP11.75□□□□□ -0.53
SH3BP4-207ENST00000454947 SSH3Q8TE77 659 aa11.75□□□□□ -0.53
SH3BP4-207ENST00000454947 C1orf115Q9H7X2 142 aa11.75□□□□□ -0.53
SH3BP4-207ENST00000454947 PDZRN3Q9UPQ7 1066 aa11.75□□□□□ -0.53
SH3BP4-207ENST00000454947 CD2APQ9Y5K6 639 aa11.75□□□□□ -0.53
SH3BP4-207ENST00000454947 DLEC1Q9Y238 1755 aa11.74□□□□□ -0.53
SH3BP4-207ENST00000454947 PDE8AO60658 829 aa11.74□□□□□ -0.53
SH3BP4-207ENST00000454947 PDE6BP35913 854 aa11.74□□□□□ -0.53
SH3BP4-207ENST00000454947 RFX5P48382 616 aaPredicted RBP11.74□□□□□ -0.53
SH3BP4-207ENST00000454947 JARID2Q92833 1246 aaPredicted RBP11.74□□□□□ -0.53
SH3BP4-207ENST00000454947 FHDC1Q9C0D6 1143 aaPredicted RBP11.74□□□□□ -0.53
SH3BP4-207ENST00000454947 PNMA6EA0A0J9YXQ4 647 aa11.73□□□□□ -0.53
SH3BP4-207ENST00000454947 DCAF8L1A6NGE4 600 aa11.73□□□□□ -0.53
SH3BP4-207ENST00000454947 HCLS1P14317 486 aaPredicted RBP11.73□□□□□ -0.53
SH3BP4-207ENST00000454947 ATP8B2P98198 1209 aa11.73□□□□□ -0.53
SH3BP4-207ENST00000454947 TTLL11Q8NHH1 800 aa11.73□□□□□ -0.53
SH3BP4-207ENST00000454947 KDM2BQ8NHM5 1336 aa11.73□□□□□ -0.53
SH3BP4-207ENST00000454947 BRIP1Q9BX63 1249 aa11.73□□□□□ -0.53
SH3BP4-207ENST00000454947 TGFB2P61812 414 aa11.72□□□□□ -0.53
SH3BP4-207ENST00000454947 RTL5Q5HYW3 569 aaPredicted RBP11.72□□□□□ -0.53
SH3BP4-207ENST00000454947 LRRC37AA6NMS7 1700 aa11.72□□□□□ -0.53
SH3BP4-207ENST00000454947 H0YIN7 160 aa11.71□□□□□ -0.53
SH3BP4-207ENST00000454947 HOXA10P31260 410 aaPredicted RBP11.71□□□□□ -0.53
SH3BP4-207ENST00000454947 FAM161AQ3B820 660 aa11.71□□□□□ -0.53
SH3BP4-207ENST00000454947 LMBR1LQ6UX01 489 aa11.71□□□□□ -0.53
SH3BP4-207ENST00000454947 NLRP3Q96P20 1036 aa11.71□□□□□ -0.53
SH3BP4-207ENST00000454947 COPRSQ9NQ92 184 aa11.71□□□□□ -0.53
SH3BP4-207ENST00000454947 NOP58Q9Y2X3 529 aaKnown RBP11.71□□□□□ -0.53
SH3BP4-207ENST00000454947 SRGAP3O43295 1099 aa11.7□□□□□ -0.54
SH3BP4-207ENST00000454947 C2CD5Q86YS7 1000 aa11.7□□□□□ -0.54
SH3BP4-207ENST00000454947 RPGRQ92834 1020 aaKnown RBP11.7□□□□□ -0.54
SH3BP4-207ENST00000454947 SYT17Q9BSW7 474 aa11.7□□□□□ -0.54
SH3BP4-207ENST00000454947 GREM2Q9H772 168 aa11.7□□□□□ -0.54
SH3BP4-207ENST00000454947 PPP4R2Q9NY27 417 aa11.7□□□□□ -0.54
SH3BP4-207ENST00000454947 LTBP1Q14766 1721 aa11.69□□□□□ -0.54
SH3BP4-207ENST00000454947 IGHDP01880 384 aa11.69□□□□□ -0.54
SH3BP4-207ENST00000454947 PTPN12Q05209 780 aaKnown RBP11.69□□□□□ -0.54
SH3BP4-207ENST00000454947 CCDC152Q4G0S7 254 aa11.69□□□□□ -0.54
SH3BP4-207ENST00000454947 SMC5Q8IY18 1101 aa11.69□□□□□ -0.54
SH3BP4-207ENST00000454947 CCDC24Q8N4L8 307 aa11.69□□□□□ -0.54
SH3BP4-207ENST00000454947 BRCA1P38398 1863 aaKnown RBP11.69□□□□□ -0.54
SH3BP4-207ENST00000454947 A0A1B0GUL6 1792 aa11.69□□□□□ -0.54
SH3BP4-207ENST00000454947 SNED1Q8TER0 1413 aa11.69□□□□□ -0.54
SH3BP4-207ENST00000454947 HMMRO75330 724 aa11.68□□□□□ -0.54
SH3BP4-207ENST00000454947 SRGNP10124 158 aa11.68□□□□□ -0.54
SH3BP4-207ENST00000454947 ITGA6P23229 1130 aa11.68□□□□□ -0.54
SH3BP4-207ENST00000454947 PELP1Q8IZL8 1130 aaKnown RBP11.68□□□□□ -0.54
SH3BP4-207ENST00000454947 ZNF622Q969S3 477 aaKnown RBP eCLIP11.68□□□□□ -0.54
SH3BP4-207ENST00000454947 DCTPP1Q9H773 170 aa11.68□□□□□ -0.54
SH3BP4-207ENST00000454947 FBXO3Q9UK99 471 aa11.68□□□□□ -0.54
SH3BP4-207ENST00000454947 CIAO1O76071 339 aa11.67□□□□□ -0.54
SH3BP4-207ENST00000454947 NPR1P16066 1061 aa11.67□□□□□ -0.54
SH3BP4-207ENST00000454947 DPEP1P16444 411 aa11.67□□□□□ -0.54
SH3BP4-207ENST00000454947 NLGN2Q8NFZ4 835 aa11.67□□□□□ -0.54
SH3BP4-207ENST00000454947 CNKSR1Q969H4 720 aa11.67□□□□□ -0.54
SH3BP4-207ENST00000454947 MASTLQ96GX5 879 aa11.67□□□□□ -0.54
SH3BP4-207ENST00000454947 CRAMP1Q96RY5 1269 aa11.67□□□□□ -0.54
SH3BP4-207ENST00000454947 TMX4Q9H1E5 349 aaPredicted RBP11.67□□□□□ -0.54
SH3BP4-207ENST00000454947 SEC31BQ9NQW1 1179 aa11.67□□□□□ -0.54
SH3BP4-207ENST00000454947 PIM2Q9P1W9 311 aa11.67□□□□□ -0.54
SH3BP4-207ENST00000454947 GTF3C3Q9Y5Q9 886 aa11.67□□□□□ -0.54
SH3BP4-207ENST00000454947 A0A0G2JLW4 131 aa11.66□□□□□ -0.54
SH3BP4-207ENST00000454947 ALDH1B1P30837 517 aa11.66□□□□□ -0.54
SH3BP4-207ENST00000454947 IFIT5Q13325 482 aaKnown RBP11.66□□□□□ -0.54
SH3BP4-207ENST00000454947 STYK1Q6J9G0 422 aa11.66□□□□□ -0.54
SH3BP4-207ENST00000454947 DDX46Q7L014 1031 aaKnown RBP11.66□□□□□ -0.54
SH3BP4-207ENST00000454947 ATG9AQ7Z3C6 839 aa11.66□□□□□ -0.54
SH3BP4-207ENST00000454947 RBM17Q96I25 401 aaKnown RBP11.66□□□□□ -0.54
SH3BP4-207ENST00000454947 RWDD1Q9H446 243 aaPredicted RBP11.66□□□□□ -0.54
SH3BP4-207ENST00000454947 ANKRD18BA2A2Z9 1011 aa11.65□□□□□ -0.54
SH3BP4-207ENST00000454947 EYA2O00167 538 aa11.65□□□□□ -0.54
SH3BP4-207ENST00000454947 CHRNA5P30532 468 aa11.65□□□□□ -0.54
SH3BP4-207ENST00000454947 GRAPQ13588 217 aa11.65□□□□□ -0.54
SH3BP4-207ENST00000454947 GPR162Q16538 588 aa11.65□□□□□ -0.54
SH3BP4-207ENST00000454947 CCDC57Q2TAC2 916 aa11.65□□□□□ -0.54
SH3BP4-207ENST00000454947 DALRD3Q5D0E6 543 aaKnown RBP11.65□□□□□ -0.54
SH3BP4-207ENST00000454947 CENPQQ7L2Z9 268 aaPredicted RBP11.65□□□□□ -0.54
SH3BP4-207ENST00000454947 TTLL6Q8N841 843 aa11.65□□□□□ -0.54
SH3BP4-207ENST00000454947 VGLL2Q8N8G2 317 aa11.65□□□□□ -0.54
SH3BP4-207ENST00000454947 KLHDC4Q8TBB5 520 aa11.65□□□□□ -0.54
SH3BP4-207ENST00000454947 GRAPLQ8TC17 118 aaPredicted RBP11.65□□□□□ -0.54
SH3BP4-207ENST00000454947 CELF1Q92879 486 aaKnown RBP11.65□□□□□ -0.54
SH3BP4-207ENST00000454947 GCC1Q96CN9 775 aa11.65□□□□□ -0.54
SH3BP4-207ENST00000454947 CDC5LQ99459 802 aaKnown RBP11.65□□□□□ -0.54
SH3BP4-207ENST00000454947 PA2G4Q9UQ80 394 aaKnown RBP11.65□□□□□ -0.54
SH3BP4-207ENST00000454947 TAF1P21675 1872 aa11.65□□□□□ -0.54
SH3BP4-207ENST00000454947 CACNA1SQ13698 1873 aa11.65□□□□□ -0.54
SH3BP4-207ENST00000454947 DUOX1Q9NRD9 1551 aa11.64□□□□□ -0.55
SH3BP4-207ENST00000454947 KCNA3P22001 575 aa11.64□□□□□ -0.55
SH3BP4-207ENST00000454947 CCDC85AQ96PX6 553 aaPredicted RBP11.64□□□□□ -0.55
SH3BP4-207ENST00000454947 BCS1LQ9Y276 419 aa11.64□□□□□ -0.55
SH3BP4-207ENST00000454947 RIPOR2Q9Y4F9 1068 aa11.64□□□□□ -0.55
SH3BP4-207ENST00000454947 SPEF2Q9C093 1822 aa11.64□□□□□ -0.55
SH3BP4-207ENST00000454947 ARAP2Q8WZ64 1704 aa11.63□□□□□ -0.55
SH3BP4-207ENST00000454947 SRCAPQ6ZRS2 3230 aa11.63□□□□□ -0.55
SH3BP4-207ENST00000454947 IL15P40933 162 aaPredicted RBP11.63□□□□□ -0.55
SH3BP4-207ENST00000454947 SOGA3Q5TF21 947 aa11.63□□□□□ -0.55
SH3BP4-207ENST00000454947 B4GALNT3Q6L9W6 998 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms