RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 LMBR1LQ6UX01 489 aa14.05□□□□□ -0.16
TRAF4-206ENST00000454852 NLRP3Q96P20 1036 aa14.05□□□□□ -0.16
TRAF4-206ENST00000454852 PDZRN3Q9UPQ7 1066 aa14.05□□□□□ -0.16
TRAF4-206ENST00000454852 ZBTB7AO95365 584 aa14.04□□□□□ -0.16
TRAF4-206ENST00000454852 HCLS1P14317 486 aaPredicted RBP14.04□□□□□ -0.16
TRAF4-206ENST00000454852 POLD1P28340 1107 aa14.04□□□□□ -0.16
TRAF4-206ENST00000454852 PTGER2P43116 358 aa14.04□□□□□ -0.16
TRAF4-206ENST00000454852 RFX5P48382 616 aaPredicted RBP14.04□□□□□ -0.16
TRAF4-206ENST00000454852 CCDC152Q4G0S7 254 aa14.04□□□□□ -0.16
TRAF4-206ENST00000454852 LRP5O75197 1615 aa14.04□□□□□ -0.16
TRAF4-206ENST00000454852 PNMA6EA0A0J9YXQ4 647 aa14.03□□□□□ -0.16
TRAF4-206ENST00000454852 SRGAP3O43295 1099 aa14.03□□□□□ -0.16
TRAF4-206ENST00000454852 HOXA10P31260 410 aaPredicted RBP14.03□□□□□ -0.16
TRAF4-206ENST00000454852 RWDD1Q9H446 243 aaPredicted RBP14.03□□□□□ -0.16
TRAF4-206ENST00000454852 COPRSQ9NQ92 184 aa14.03□□□□□ -0.16
TRAF4-206ENST00000454852 FBXO3Q9UK99 471 aa14.03□□□□□ -0.16
TRAF4-206ENST00000454852 NOP58Q9Y2X3 529 aaKnown RBP14.03□□□□□ -0.16
TRAF4-206ENST00000454852 PDE6BP35913 854 aa14.02□□□□□ -0.17
TRAF4-206ENST00000454852 C3orf67Q6ZVT6 689 aa14.02□□□□□ -0.17
TRAF4-206ENST00000454852 DCTPP1Q9H773 170 aa14.02□□□□□ -0.17
TRAF4-206ENST00000454852 GTF3C3Q9Y5Q9 886 aa14.02□□□□□ -0.17
TRAF4-206ENST00000454852 KDM2BQ8NHM5 1336 aa14.01□□□□□ -0.17
TRAF4-206ENST00000454852 NPHP1O15259 732 aa14.01□□□□□ -0.17
TRAF4-206ENST00000454852 PTPN12Q05209 780 aaKnown RBP14.01□□□□□ -0.17
TRAF4-206ENST00000454852 FAM161AQ3B820 660 aa14.01□□□□□ -0.17
TRAF4-206ENST00000454852 GREM2Q9H772 168 aa14.01□□□□□ -0.17
TRAF4-206ENST00000454852 SPON1Q9HCB6 807 aa14.01□□□□□ -0.17
TRAF4-206ENST00000454852 ATF5Q9Y2D1 282 aaPredicted RBP14.01□□□□□ -0.17
TRAF4-206ENST00000454852 DLEC1Q9Y238 1755 aa14.01□□□□□ -0.17
TRAF4-206ENST00000454852 KIAA1551Q9HCM1 1747 aa14.01□□□□□ -0.17
TRAF4-206ENST00000454852 ITGA6P23229 1130 aa14□□□□□ -0.17
TRAF4-206ENST00000454852 IFIT5Q13325 482 aaKnown RBP14□□□□□ -0.17
TRAF4-206ENST00000454852 CCDC57Q2TAC2 916 aa14□□□□□ -0.17
TRAF4-206ENST00000454852 SMC5Q8IY18 1101 aa14□□□□□ -0.17
TRAF4-206ENST00000454852 GCC1Q96CN9 775 aa14□□□□□ -0.17
TRAF4-206ENST00000454852 CRAMP1Q96RY5 1269 aa14□□□□□ -0.17
TRAF4-206ENST00000454852 COL11A2P13942 1736 aaPredicted RBP14□□□□□ -0.17
TRAF4-206ENST00000454852 ANKRD18BA2A2Z9 1011 aa13.99□□□□□ -0.17
TRAF4-206ENST00000454852 CIAO1O76071 339 aa13.99□□□□□ -0.17
TRAF4-206ENST00000454852 IGHDP01880 384 aa13.99□□□□□ -0.17
TRAF4-206ENST00000454852 SRGNP10124 158 aa13.99□□□□□ -0.17
TRAF4-206ENST00000454852 CCDC24Q8N4L8 307 aa13.99□□□□□ -0.17
TRAF4-206ENST00000454852 CCDC136Q96JN2 1154 aa13.99□□□□□ -0.17
TRAF4-206ENST00000454852 CDC5LQ99459 802 aaKnown RBP13.99□□□□□ -0.17
TRAF4-206ENST00000454852 CD2APQ9Y5K6 639 aa13.99□□□□□ -0.17
TRAF4-206ENST00000454852 NPR1P16066 1061 aa13.98□□□□□ -0.17
TRAF4-206ENST00000454852 TGFB2P61812 414 aa13.98□□□□□ -0.17
TRAF4-206ENST00000454852 HSP90AB4PQ58FF6 505 aa13.98□□□□□ -0.17
TRAF4-206ENST00000454852 STYK1Q6J9G0 422 aa13.98□□□□□ -0.17
TRAF4-206ENST00000454852 CENPQQ7L2Z9 268 aaPredicted RBP13.98□□□□□ -0.17
TRAF4-206ENST00000454852 RAB11FIP3O75154 756 aa13.97□□□□□ -0.17
TRAF4-206ENST00000454852 DDX46Q7L014 1031 aaKnown RBP13.97□□□□□ -0.17
TRAF4-206ENST00000454852 MASTLQ96GX5 879 aa13.97□□□□□ -0.17
TRAF4-206ENST00000454852 RBM17Q96I25 401 aaKnown RBP13.97□□□□□ -0.17
TRAF4-206ENST00000454852 SEC31BQ9NQW1 1179 aa13.97□□□□□ -0.17
TRAF4-206ENST00000454852 CHMP3Q9Y3E7 222 aa13.97□□□□□ -0.17
TRAF4-206ENST00000454852 COL4A1P02462 1669 aa13.97□□□□□ -0.17
TRAF4-206ENST00000454852 LRRC37AA6NMS7 1700 aa13.96□□□□□ -0.17
TRAF4-206ENST00000454852 H0YIN7 160 aa13.96□□□□□ -0.17
TRAF4-206ENST00000454852 EYA2O00167 538 aa13.96□□□□□ -0.17
TRAF4-206ENST00000454852 BBOX1O75936 387 aa13.96□□□□□ -0.17
TRAF4-206ENST00000454852 ALDH1B1P30837 517 aa13.96□□□□□ -0.17
TRAF4-206ENST00000454852 RPS8P62241 208 aaKnown RBP13.96□□□□□ -0.17
TRAF4-206ENST00000454852 GRAPQ13588 217 aa13.96□□□□□ -0.17
TRAF4-206ENST00000454852 TMC4Q7Z404 712 aa13.96□□□□□ -0.17
TRAF4-206ENST00000454852 GRAPLQ8TC17 118 aaPredicted RBP13.96□□□□□ -0.17
TRAF4-206ENST00000454852 RPGRQ92834 1020 aaKnown RBP13.96□□□□□ -0.17
TRAF4-206ENST00000454852 BSDC1Q9NW68 430 aaPredicted RBP13.96□□□□□ -0.17
TRAF4-206ENST00000454852 SURF6O75683 361 aaKnown RBP13.95□□□□□ -0.18
TRAF4-206ENST00000454852 IGHMBP2P38935 993 aaKnown RBP13.95□□□□□ -0.18
TRAF4-206ENST00000454852 IL15P40933 162 aaPredicted RBP13.95□□□□□ -0.18
TRAF4-206ENST00000454852 B4GALNT3Q6L9W6 998 aa13.95□□□□□ -0.18
TRAF4-206ENST00000454852 ATG9AQ7Z3C6 839 aa13.95□□□□□ -0.18
TRAF4-206ENST00000454852 C2CD5Q86YS7 1000 aa13.95□□□□□ -0.18
TRAF4-206ENST00000454852 ERC1Q8IUD2 1116 aa13.95□□□□□ -0.18
TRAF4-206ENST00000454852 CELF1Q92879 486 aaKnown RBP13.95□□□□□ -0.18
TRAF4-206ENST00000454852 CCDC85AQ96PX6 553 aaPredicted RBP13.95□□□□□ -0.18
TRAF4-206ENST00000454852 PA2G4Q9UQ80 394 aaKnown RBP13.95□□□□□ -0.18
TRAF4-206ENST00000454852 RIPOR2Q9Y4F9 1068 aa13.95□□□□□ -0.18
TRAF4-206ENST00000454852 BRCA1P38398 1863 aaKnown RBP13.94□□□□□ -0.18
TRAF4-206ENST00000454852 G3BP1Q13283 466 aaKnown RBP eCLIP13.94□□□□□ -0.18
TRAF4-206ENST00000454852 LDHAL6AQ6ZMR3 332 aa13.94□□□□□ -0.18
TRAF4-206ENST00000454852 ANKRD18AQ8IVF6 992 aa13.94□□□□□ -0.18
TRAF4-206ENST00000454852 KLHDC4Q8TBB5 520 aa13.94□□□□□ -0.18
TRAF4-206ENST00000454852 CNKSR1Q969H4 720 aa13.94□□□□□ -0.18
TRAF4-206ENST00000454852 ZNF594Q96JF6 807 aaPredicted RBP13.94□□□□□ -0.18
TRAF4-206ENST00000454852 A0A1B0GUL6 1792 aa13.94□□□□□ -0.18
TRAF4-206ENST00000454852 MROH5Q6ZUA9 1318 aa13.93□□□□□ -0.18
TRAF4-206ENST00000454852 TAF1P21675 1872 aa13.93□□□□□ -0.18
TRAF4-206ENST00000454852 SASH1O94885 1247 aa13.93□□□□□ -0.18
TRAF4-206ENST00000454852 KCNA3P22001 575 aa13.93□□□□□ -0.18
TRAF4-206ENST00000454852 TAF7LQ5H9L4 462 aa13.93□□□□□ -0.18
TRAF4-206ENST00000454852 KIF1BPQ96EK5 621 aa13.93□□□□□ -0.18
TRAF4-206ENST00000454852 MPHOSPH8Q99549 860 aa13.93□□□□□ -0.18
TRAF4-206ENST00000454852 GPR108Q9NPR9 543 aa13.93□□□□□ -0.18
TRAF4-206ENST00000454852 EXOC6BQ9Y2D4 811 aa13.93□□□□□ -0.18
TRAF4-206ENST00000454852 NUCB1Q02818 461 aa13.92□□□□□ -0.18
TRAF4-206ENST00000454852 LRRC24Q50LG9 513 aa13.92□□□□□ -0.18
TRAF4-206ENST00000454852 VGLL2Q8N8G2 317 aa13.92□□□□□ -0.18
TRAF4-206ENST00000454852 RHPN1Q8TCX5 695 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms