RNA–Protein interactions for RNA: ENST00000454252.1

CHEK2-220, Transcript of checkpoint kinase 2, humanhuman

TSL 3

Gene CHEK2, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-220ENST00000454252 TSPYL4Q9UJ04 414 aa9.29□□□□□ -0.92
CHEK2-220ENST00000454252 MLLT1Q03111 559 aaPredicted RBP9.28□□□□□ -0.92
CHEK2-220ENST00000454252 SAMD7Q7Z3H4 446 aa9.28□□□□□ -0.92
CHEK2-220ENST00000454252 PPP1R42Q7Z4L9 355 aa9.28□□□□□ -0.92
CHEK2-220ENST00000454252 USP48Q86UV5 1035 aa9.28□□□□□ -0.92
CHEK2-220ENST00000454252 NLRP10Q86W26 655 aa9.28□□□□□ -0.92
CHEK2-220ENST00000454252 MICALL2Q8IY33 904 aa9.28□□□□□ -0.92
CHEK2-220ENST00000454252 PNISRQ8TF01 805 aaKnown RBP9.28□□□□□ -0.92
CHEK2-220ENST00000454252 XAGE3Q8WTP9 111 aa9.28□□□□□ -0.92
CHEK2-220ENST00000454252 BCL2L13Q9BXK5 485 aa9.28□□□□□ -0.92
CHEK2-220ENST00000454252 KCNQ5Q9NR82 932 aa9.28□□□□□ -0.92
CHEK2-220ENST00000454252 COL4A1P02462 1669 aa9.27□□□□□ -0.93
CHEK2-220ENST00000454252 ADM5C9JUS6 153 aa9.27□□□□□ -0.93
CHEK2-220ENST00000454252 MAP2K2P36507 400 aa9.27□□□□□ -0.93
CHEK2-220ENST00000454252 KIAA2012Q0VF49 1180 aa9.27□□□□□ -0.93
CHEK2-220ENST00000454252 PARP10Q53GL7 1025 aa9.27□□□□□ -0.93
CHEK2-220ENST00000454252 SLC10A5Q5PT55 438 aa9.27□□□□□ -0.93
CHEK2-220ENST00000454252 COPS6Q7L5N1 327 aa9.27□□□□□ -0.93
CHEK2-220ENST00000454252 MPNDQ8N594 471 aa9.27□□□□□ -0.93
CHEK2-220ENST00000454252 DBNDD1Q9H9R9 158 aa9.27□□□□□ -0.93
CHEK2-220ENST00000454252 CNOT7Q9UIV1 285 aaKnown RBP9.27□□□□□ -0.93
CHEK2-220ENST00000454252 ASTN2O75129 1339 aaPredicted RBP9.27□□□□□ -0.93
CHEK2-220ENST00000454252 LAMB4A4D0S4 1761 aa9.27□□□□□ -0.93
CHEK2-220ENST00000454252 DUOX1Q9NRD9 1551 aa9.26□□□□□ -0.93
CHEK2-220ENST00000454252 PSMD14O00487 310 aa9.26□□□□□ -0.93
CHEK2-220ENST00000454252 RIMBP2O15034 1052 aa9.26□□□□□ -0.93
CHEK2-220ENST00000454252 RGS19P49795 217 aa9.26□□□□□ -0.93
CHEK2-220ENST00000454252 BRPF1P55201 1214 aaPredicted RBP9.26□□□□□ -0.93
CHEK2-220ENST00000454252 HUNKP57058 714 aa9.26□□□□□ -0.93
CHEK2-220ENST00000454252 DGKZQ13574 1117 aa9.26□□□□□ -0.93
CHEK2-220ENST00000454252 DOK7Q18PE1 504 aa9.26□□□□□ -0.93
CHEK2-220ENST00000454252 TBC1D10BQ4KMP7 808 aaPredicted RBP9.26□□□□□ -0.93
CHEK2-220ENST00000454252 GRIPAP1Q4V328 841 aa9.26□□□□□ -0.93
CHEK2-220ENST00000454252 RTL5Q5HYW3 569 aaPredicted RBP9.26□□□□□ -0.93
CHEK2-220ENST00000454252 RBM26Q5T8P6 1007 aaKnown RBP9.26□□□□□ -0.93
CHEK2-220ENST00000454252 SP8Q8IXZ3 490 aa9.26□□□□□ -0.93
CHEK2-220ENST00000454252 CELF1Q92879 486 aaKnown RBP9.26□□□□□ -0.93
CHEK2-220ENST00000454252 PGAP2Q9UHJ9 254 aa9.26□□□□□ -0.93
CHEK2-220ENST00000454252 TRMT112Q9UI30 125 aaKnown RBP9.26□□□□□ -0.93
CHEK2-220ENST00000454252 RTL9Q8NET4 1388 aa9.25□□□□□ -0.93
CHEK2-220ENST00000454252 KDM3BQ7LBC6 1761 aa9.25□□□□□ -0.93
CHEK2-220ENST00000454252 BBOX1O75936 387 aa9.25□□□□□ -0.93
CHEK2-220ENST00000454252 SOX10P56693 466 aa9.25□□□□□ -0.93
CHEK2-220ENST00000454252 GRAPQ13588 217 aa9.25□□□□□ -0.93
CHEK2-220ENST00000454252 DDX46Q7L014 1031 aaKnown RBP9.25□□□□□ -0.93
CHEK2-220ENST00000454252 SUPT20HQ8NEM7 779 aa9.25□□□□□ -0.93
CHEK2-220ENST00000454252 GRAPLQ8TC17 118 aaPredicted RBP9.25□□□□□ -0.93
CHEK2-220ENST00000454252 TMX4Q9H1E5 349 aaPredicted RBP9.25□□□□□ -0.93
CHEK2-220ENST00000454252 POLLQ9UGP5 575 aa9.25□□□□□ -0.93
CHEK2-220ENST00000454252 SCAF8Q9UPN6 1271 aaKnown RBP9.25□□□□□ -0.93
CHEK2-220ENST00000454252 ERBB4Q15303 1308 aa9.25□□□□□ -0.93
CHEK2-220ENST00000454252 MAPK8IP3Q9UPT6 1336 aa9.25□□□□□ -0.93
CHEK2-220ENST00000454252 FAM155AB1AL88 458 aaPredicted RBP9.24□□□□□ -0.93
CHEK2-220ENST00000454252 ATP5J2-PTCD1G3V325 749 aa9.24□□□□□ -0.93
CHEK2-220ENST00000454252 NEFMP07197 916 aa9.24□□□□□ -0.93
CHEK2-220ENST00000454252 RIPK4P57078 832 aa9.24□□□□□ -0.93
CHEK2-220ENST00000454252 GPSM2P81274 684 aa9.24□□□□□ -0.93
CHEK2-220ENST00000454252 TCIRG1Q13488 830 aa9.24□□□□□ -0.93
CHEK2-220ENST00000454252 TNIP1Q15025 636 aa9.24□□□□□ -0.93
CHEK2-220ENST00000454252 CDC37L1Q7L3B6 337 aa9.24□□□□□ -0.93
CHEK2-220ENST00000454252 KRT26Q7Z3Y9 468 aa9.24□□□□□ -0.93
CHEK2-220ENST00000454252 CCDC146Q8IYE0 955 aa9.24□□□□□ -0.93
CHEK2-220ENST00000454252 FAM89AQ96GI7 184 aa9.24□□□□□ -0.93
CHEK2-220ENST00000454252 CHPF2Q9P2E5 772 aa9.24□□□□□ -0.93
CHEK2-220ENST00000454252 TNRC18O15417 2968 aaPredicted RBP9.23□□□□□ -0.93
CHEK2-220ENST00000454252 H7C1D1 291 aa9.23□□□□□ -0.93
CHEK2-220ENST00000454252 NEUROD2Q15784 382 aa9.23□□□□□ -0.93
CHEK2-220ENST00000454252 ZC3H15Q8WU90 426 aaKnown RBP9.23□□□□□ -0.93
CHEK2-220ENST00000454252 HHIPL1Q96JK4 782 aa9.23□□□□□ -0.93
CHEK2-220ENST00000454252 VPS33BQ9H267 617 aa9.23□□□□□ -0.93
CHEK2-220ENST00000454252 NSFL1CQ9UNZ2 370 aaKnown RBP9.23□□□□□ -0.93
CHEK2-220ENST00000454252 SH3TC1Q8TE82 1336 aa9.23□□□□□ -0.93
CHEK2-220ENST00000454252 C6orf229H3BNL8 230 aa9.22□□□□□ -0.93
CHEK2-220ENST00000454252 CA12O43570 354 aa9.22□□□□□ -0.93
CHEK2-220ENST00000454252 ECE2O60344 883 aa9.22□□□□□ -0.93
CHEK2-220ENST00000454252 TRPA1O75762 1119 aa9.22□□□□□ -0.93
CHEK2-220ENST00000454252 KIF23Q02241 960 aaPredicted RBP9.22□□□□□ -0.93
CHEK2-220ENST00000454252 NOGQ13253 232 aa9.22□□□□□ -0.93
CHEK2-220ENST00000454252 WASHC4Q2M389 1173 aa9.22□□□□□ -0.93
CHEK2-220ENST00000454252 RGMBQ6NW40 437 aa9.22□□□□□ -0.93
CHEK2-220ENST00000454252 JARID2Q92833 1246 aaPredicted RBP9.22□□□□□ -0.93
CHEK2-220ENST00000454252 GBA2Q9HCG7 927 aaPredicted RBP9.22□□□□□ -0.93
CHEK2-220ENST00000454252 LAS1LQ9Y4W2 734 aaKnown RBP9.22□□□□□ -0.93
CHEK2-220ENST00000454252 CDHR2Q9BYE9 1310 aa9.22□□□□□ -0.93
CHEK2-220ENST00000454252 NUP98P52948 1817 aa9.21□□□□□ -0.93
CHEK2-220ENST00000454252 WTIPA6NIX2 430 aaPredicted RBP9.21□□□□□ -0.94
CHEK2-220ENST00000454252 TMPOP42166 694 aaKnown RBP9.21□□□□□ -0.94
CHEK2-220ENST00000454252 ZNF157P51786 506 aaPredicted RBP9.21□□□□□ -0.94
CHEK2-220ENST00000454252 MOB2Q70IA6 237 aa9.21□□□□□ -0.94
CHEK2-220ENST00000454252 CCDC85AQ96PX6 553 aaPredicted RBP9.21□□□□□ -0.94
CHEK2-220ENST00000454252 SEC31BQ9NQW1 1179 aa9.21□□□□□ -0.94
CHEK2-220ENST00000454252 RNF186Q9NXI6 227 aa9.21□□□□□ -0.94
CHEK2-220ENST00000454252 GGA3Q9NZ52 723 aa9.21□□□□□ -0.94
CHEK2-220ENST00000454252 DDX10Q13206 875 aaKnown RBP9.2□□□□□ -0.94
CHEK2-220ENST00000454252 KIF4BQ2VIQ3 1234 aa9.2□□□□□ -0.94
CHEK2-220ENST00000454252 HSP90AB3PQ58FF7 597 aa9.2□□□□□ -0.94
CHEK2-220ENST00000454252 HDGFL1Q5TGJ6 251 aa9.2□□□□□ -0.94
CHEK2-220ENST00000454252 TBC1D16Q8TBP0 767 aa9.2□□□□□ -0.94
CHEK2-220ENST00000454252 DPF2Q92785 391 aa9.2□□□□□ -0.94
CHEK2-220ENST00000454252 ISCA1Q9BUE6 129 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms