RNA–Protein interactions for RNA: ENST00000453992.5

NCL-205, Transcript of nucleolin, humanhuman

TSL 4

Gene NCL, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-205ENST00000453992 CRAMP1Q96RY5 1269 aa24.34■■□□□ 1.49
NCL-205ENST00000453992 RTL9Q8NET4 1388 aa24.33■■□□□ 1.49
NCL-205ENST00000453992 YY1P25490 414 aa24.33■■□□□ 1.49
NCL-205ENST00000453992 CCDC152Q4G0S7 254 aa24.33■■□□□ 1.49
NCL-205ENST00000453992 CLUAP1Q96AJ1 413 aa24.33■■□□□ 1.49
NCL-205ENST00000453992 TNNQ9UQP3 1299 aa24.33■■□□□ 1.49
NCL-205ENST00000453992 USP44Q9H0E7 712 aa24.32■■□□□ 1.48
NCL-205ENST00000453992 BCS1LQ9Y276 419 aa24.32■■□□□ 1.48
NCL-205ENST00000453992 TAF1P21675 1872 aa24.32■■□□□ 1.48
NCL-205ENST00000453992 NBPF7P0C2Y1 421 aaPredicted RBP24.31■■□□□ 1.48
NCL-205ENST00000453992 PRPF40BQ6NWY9 871 aaKnown RBP24.31■■□□□ 1.48
NCL-205ENST00000453992 DDX46Q7L014 1031 aaKnown RBP24.31■■□□□ 1.48
NCL-205ENST00000453992 TMEM57Q8N5G2 664 aa24.3■■□□□ 1.48
NCL-205ENST00000453992 LRRC37AA6NMS7 1700 aa24.3■■□□□ 1.48
NCL-205ENST00000453992 GRIN3BO60391 1043 aa24.29■■□□□ 1.48
NCL-205ENST00000453992 TTLL11Q8NHH1 800 aa24.29■■□□□ 1.48
NCL-205ENST00000453992 HDAC5Q9UQL6 1122 aa24.29■■□□□ 1.48
NCL-205ENST00000453992 FER1L6Q2WGJ9 1857 aa24.28■■□□□ 1.48
NCL-205ENST00000453992 CSF1RP07333 972 aa24.28■■□□□ 1.48
NCL-205ENST00000453992 RLBP1P12271 317 aa24.28■■□□□ 1.48
NCL-205ENST00000453992 FOXO4P98177 505 aa24.28■■□□□ 1.48
NCL-205ENST00000453992 GRAPQ13588 217 aa24.28■■□□□ 1.48
NCL-205ENST00000453992 GRAPLQ8TC17 118 aaPredicted RBP24.28■■□□□ 1.48
NCL-205ENST00000453992 UBTFL1P0CB47 393 aaPredicted RBP24.27■■□□□ 1.48
NCL-205ENST00000453992 SOGA3Q5TF21 947 aa24.27■■□□□ 1.48
NCL-205ENST00000453992 SUCLG2Q96I99 432 aa24.27■■□□□ 1.48
NCL-205ENST00000453992 SPEF2Q9C093 1822 aa24.26■■□□□ 1.47
NCL-205ENST00000453992 BBOX1O75936 387 aa24.26■■□□□ 1.47
NCL-205ENST00000453992 GNAI3P08754 354 aa24.26■■□□□ 1.47
NCL-205ENST00000453992 PDE3AQ14432 1141 aa24.26■■□□□ 1.47
NCL-205ENST00000453992 TMC4Q7Z404 712 aa24.26■■□□□ 1.47
NCL-205ENST00000453992 KAZALD1Q96I82 304 aa24.26■■□□□ 1.47
NCL-205ENST00000453992 COL4A1P02462 1669 aa24.25■■□□□ 1.47
NCL-205ENST00000453992 PPEF1O14829 653 aaPredicted RBP24.25■■□□□ 1.47
NCL-205ENST00000453992 PLIN1O60240 522 aa24.25■■□□□ 1.47
NCL-205ENST00000453992 RABL6Q3YEC7 729 aaPredicted RBP24.25■■□□□ 1.47
NCL-205ENST00000453992 ITPRIPQ8IWB1 547 aa24.25■■□□□ 1.47
NCL-205ENST00000453992 PANK1Q8TE04 598 aa24.25■■□□□ 1.47
NCL-205ENST00000453992 C7orf43Q8WVR3 580 aa24.25■■□□□ 1.47
NCL-205ENST00000453992 MEIS3Q99687 375 aa24.25■■□□□ 1.47
NCL-205ENST00000453992 GREM2Q9H772 168 aa24.25■■□□□ 1.47
NCL-205ENST00000453992 CHD4Q14839 1912 aa24.24■■□□□ 1.47
NCL-205ENST00000453992 RRP1P56182 461 aaKnown RBP24.24■■□□□ 1.47
NCL-205ENST00000453992 EPHA10Q5JZY3 1008 aa24.24■■□□□ 1.47
NCL-205ENST00000453992 CDC5LQ99459 802 aaKnown RBP24.24■■□□□ 1.47
NCL-205ENST00000453992 FAM161AQ3B820 660 aa24.23■■□□□ 1.47
NCL-205ENST00000453992 CC2D2BQ6DHV5 1058 aa24.23■■□□□ 1.47
NCL-205ENST00000453992 LMBR1LQ6UX01 489 aa24.23■■□□□ 1.47
NCL-205ENST00000453992 CCDC85AQ96PX6 553 aaPredicted RBP24.23■■□□□ 1.47
NCL-205ENST00000453992 BICC1Q9H694 974 aaKnown RBP24.23■■□□□ 1.47
NCL-205ENST00000453992 C21orf2O43822 256 aa24.22■■□□□ 1.47
NCL-205ENST00000453992 MVPQ14764 893 aaKnown RBP24.22■■□□□ 1.47
NCL-205ENST00000453992 GRIPAP1Q4V328 841 aa24.22■■□□□ 1.47
NCL-205ENST00000453992 CELF1Q92879 486 aaKnown RBP24.22■■□□□ 1.47
NCL-205ENST00000453992 SEC31BQ9NQW1 1179 aa24.22■■□□□ 1.47
NCL-205ENST00000453992 SNED1Q8TER0 1413 aa24.21■■□□□ 1.47
NCL-205ENST00000453992 ITGA6P23229 1130 aa24.21■■□□□ 1.47
NCL-205ENST00000453992 RPS8P62241 208 aaKnown RBP24.21■■□□□ 1.47
NCL-205ENST00000453992 CCDC93Q567U6 631 aa24.21■■□□□ 1.47
NCL-205ENST00000453992 ANKRD44Q8N8A2 993 aa24.21■■□□□ 1.47
NCL-205ENST00000453992 ATP6V0A2Q9Y487 856 aa24.21■■□□□ 1.47
NCL-205ENST00000453992 IFIT5Q13325 482 aaKnown RBP24.2■■□□□ 1.46
NCL-205ENST00000453992 ANKRD18AQ8IVF6 992 aa24.2■■□□□ 1.46
NCL-205ENST00000453992 TMX4Q9H1E5 349 aaPredicted RBP24.2■■□□□ 1.46
NCL-205ENST00000453992 SBF1O95248 1867 aa24.19■■□□□ 1.46
NCL-205ENST00000453992 LTBP1Q14766 1721 aa24.19■■□□□ 1.46
NCL-205ENST00000453992 ANKRD18BA2A2Z9 1011 aa24.19■■□□□ 1.46
NCL-205ENST00000453992 SP8Q8IXZ3 490 aa24.19■■□□□ 1.46
NCL-205ENST00000453992 ZNF219Q9P2Y4 722 aaPredicted RBP24.19■■□□□ 1.46
NCL-205ENST00000453992 DDX19BQ9UMR2 479 aa24.19■■□□□ 1.46
NCL-205ENST00000453992 CHMP3Q9Y3E7 222 aa24.19■■□□□ 1.46
NCL-205ENST00000453992 LRRFIP2Q9Y608 721 aaKnown RBP24.19■■□□□ 1.46
NCL-205ENST00000453992 LTBP3Q9NS15 1303 aa24.18■■□□□ 1.46
NCL-205ENST00000453992 ZBTB7BO15156 539 aaPredicted RBP24.18■■□□□ 1.46
NCL-205ENST00000453992 GNAI2P04899 355 aa24.18■■□□□ 1.46
NCL-205ENST00000453992 CCDC57Q2TAC2 916 aa24.18■■□□□ 1.46
NCL-205ENST00000453992 RTKN2Q8IZC4 609 aa24.18■■□□□ 1.46
NCL-205ENST00000453992 CHMP4BQ9H444 224 aaKnown RBP24.18■■□□□ 1.46
NCL-205ENST00000453992 A0A1B0GUL6 1792 aa24.17■■□□□ 1.46
NCL-205ENST00000453992 IGHMBP2P38935 993 aaKnown RBP24.17■■□□□ 1.46
NCL-205ENST00000453992 ARHGAP27Q6ZUM4 889 aa24.17■■□□□ 1.46
NCL-205ENST00000453992 COG6Q9Y2V7 657 aa24.17■■□□□ 1.46
NCL-205ENST00000453992 CCDC88AQ3V6T2 1871 aa24.16■■□□□ 1.46
NCL-205ENST00000453992 C20orf194Q5TEA3 1177 aa24.16■■□□□ 1.46
NCL-205ENST00000453992 BSDC1Q9NW68 430 aaPredicted RBP24.16■■□□□ 1.46
NCL-205ENST00000453992 DICER1Q9UPY3 1922 aaKnown RBP24.16■■□□□ 1.46
NCL-205ENST00000453992 NFKBIEO00221 500 aa24.15■■□□□ 1.46
NCL-205ENST00000453992 MTX1Q13505 466 aa24.15■■□□□ 1.46
NCL-205ENST00000453992 OLFM4Q6UX06 510 aa24.14■■□□□ 1.45
NCL-205ENST00000453992 ZNF784Q8NCA9 323 aaPredicted RBP24.14■■□□□ 1.45
NCL-205ENST00000453992 PSMD1Q99460 953 aa24.14■■□□□ 1.45
NCL-205ENST00000453992 TAOK3Q9H2K8 898 aa24.14■■□□□ 1.45
NCL-205ENST00000453992 DUOX1Q9NRD9 1551 aa24.13■■□□□ 1.45
NCL-205ENST00000453992 TAF7LQ5H9L4 462 aa24.13■■□□□ 1.45
NCL-205ENST00000453992 MPHOSPH8Q99549 860 aa24.13■■□□□ 1.45
NCL-205ENST00000453992 FKBP4Q02790 459 aaKnown RBP eCLIP24.12■■□□□ 1.45
NCL-205ENST00000453992 SLC51AQ86UW1 340 aa24.11■■□□□ 1.45
NCL-205ENST00000453992 TIAM2Q8IVF5 1701 aa24.1■■□□□ 1.45
NCL-205ENST00000453992 RASSF7Q02833 373 aa24.1■■□□□ 1.45
NCL-205ENST00000453992 DPP8Q6V1X1 898 aaPredicted RBP24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms