RNA–Protein interactions for RNA: ENST00000453466.1

PMPCB-205, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 5

Gene PMPCB, Length 1,509 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-205ENST00000453466 TMX4Q9H1E5 349 aaPredicted RBP25.24■■□□□ 1.63
PMPCB-205ENST00000453466 YY1P25490 414 aa25.23■■□□□ 1.63
PMPCB-205ENST00000453466 CC2D2BQ6DHV5 1058 aa25.23■■□□□ 1.63
PMPCB-205ENST00000453466 ABCC4O15439 1325 aa25.23■■□□□ 1.63
PMPCB-205ENST00000453466 GRM8O00222 908 aa25.22■■□□□ 1.63
PMPCB-205ENST00000453466 MS4A1P11836 297 aa25.22■■□□□ 1.63
PMPCB-205ENST00000453466 GRAPQ13588 217 aa25.22■■□□□ 1.63
PMPCB-205ENST00000453466 CCDC93Q567U6 631 aa25.22■■□□□ 1.63
PMPCB-205ENST00000453466 ZKSCAN2Q63HK3 967 aa25.22■■□□□ 1.63
PMPCB-205ENST00000453466 GRAPLQ8TC17 118 aaPredicted RBP25.22■■□□□ 1.63
PMPCB-205ENST00000453466 ARFGEF1Q9Y6D6 1849 aa25.22■■□□□ 1.63
PMPCB-205ENST00000453466 PPEF1O14829 653 aaPredicted RBP25.22■■□□□ 1.63
PMPCB-205ENST00000453466 CASP7P55210 303 aa25.22■■□□□ 1.63
PMPCB-205ENST00000453466 FRAT1Q92837 279 aaPredicted RBP25.22■■□□□ 1.63
PMPCB-205ENST00000453466 CTSWP56202 376 aa25.21■■□□□ 1.63
PMPCB-205ENST00000453466 C20orf194Q5TEA3 1177 aa25.21■■□□□ 1.63
PMPCB-205ENST00000453466 RTKN2Q8IZC4 609 aa25.21■■□□□ 1.63
PMPCB-205ENST00000453466 PLA2G12BQ9BX93 195 aa25.21■■□□□ 1.63
PMPCB-205ENST00000453466 CCT4P50991 539 aaKnown RBP25.2■■□□□ 1.62
PMPCB-205ENST00000453466 GRIPAP1Q4V328 841 aa25.2■■□□□ 1.62
PMPCB-205ENST00000453466 SLX4Q8IY92 1834 aa25.2■■□□□ 1.62
PMPCB-205ENST00000453466 TMC4Q7Z404 712 aa25.19■■□□□ 1.62
PMPCB-205ENST00000453466 TTLL11Q8NHH1 800 aa25.19■■□□□ 1.62
PMPCB-205ENST00000453466 PPP4R2Q9NY27 417 aa25.19■■□□□ 1.62
PMPCB-205ENST00000453466 NFKBIEO00221 500 aa25.18■■□□□ 1.62
PMPCB-205ENST00000453466 ATF7IPQ6VMQ6 1270 aa25.18■■□□□ 1.62
PMPCB-205ENST00000453466 ATP6V0A2Q9Y487 856 aa25.18■■□□□ 1.62
PMPCB-205ENST00000453466 RPS8P62241 208 aaKnown RBP25.17■■□□□ 1.62
PMPCB-205ENST00000453466 RASSF7Q02833 373 aa25.17■■□□□ 1.62
PMPCB-205ENST00000453466 OLFM4Q6UX06 510 aa25.17■■□□□ 1.62
PMPCB-205ENST00000453466 SP8Q8IXZ3 490 aa25.17■■□□□ 1.62
PMPCB-205ENST00000453466 CCDC85AQ96PX6 553 aaPredicted RBP25.17■■□□□ 1.62
PMPCB-205ENST00000453466 TAOK3Q9H2K8 898 aa25.17■■□□□ 1.62
PMPCB-205ENST00000453466 DDX60Q8IY21 1712 aaKnown RBP25.17■■□□□ 1.62
PMPCB-205ENST00000453466 LMNB1P20700 586 aa25.17■■□□□ 1.62
PMPCB-205ENST00000453466 CELF1Q92879 486 aaKnown RBP25.17■■□□□ 1.62
PMPCB-205ENST00000453466 SEC31BQ9NQW1 1179 aa25.17■■□□□ 1.62
PMPCB-205ENST00000453466 LTBP3Q9NS15 1303 aa25.17■■□□□ 1.62
PMPCB-205ENST00000453466 C9orf131Q5VYM1 1079 aa25.16■■□□□ 1.62
PMPCB-205ENST00000453466 EXOC6Q8TAG9 804 aa25.16■■□□□ 1.62
PMPCB-205ENST00000453466 UTYO14607 1347 aa25.15■■□□□ 1.62
PMPCB-205ENST00000453466 CSF1RP07333 972 aa25.15■■□□□ 1.62
PMPCB-205ENST00000453466 TRIM27P14373 513 aa25.15■■□□□ 1.62
PMPCB-205ENST00000453466 CRBNQ96SW2 442 aa25.15■■□□□ 1.62
PMPCB-205ENST00000453466 RNF181Q9P0P0 153 aa25.15■■□□□ 1.62
PMPCB-205ENST00000453466 NBPF7P0C2Y1 421 aaPredicted RBP25.14■■□□□ 1.62
PMPCB-205ENST00000453466 FKBP4Q02790 459 aaKnown RBP eCLIP25.14■■□□□ 1.62
PMPCB-205ENST00000453466 DZIP1LQ8IYY4 767 aaKnown RBP25.14■■□□□ 1.62
PMPCB-205ENST00000453466 CDC5LQ99459 802 aaKnown RBP25.14■■□□□ 1.62
PMPCB-205ENST00000453466 CHD4Q14839 1912 aa25.14■■□□□ 1.61
PMPCB-205ENST00000453466 USP44Q9H0E7 712 aa25.13■■□□□ 1.61
PMPCB-205ENST00000453466 GREM2Q9H772 168 aa25.13■■□□□ 1.61
PMPCB-205ENST00000453466 LAMB2P55268 1798 aa25.13■■□□□ 1.61
PMPCB-205ENST00000453466 FOXO4P98177 505 aa25.12■■□□□ 1.61
PMPCB-205ENST00000453466 ANKRD18AQ8IVF6 992 aa25.12■■□□□ 1.61
PMPCB-205ENST00000453466 PSMD1Q99460 953 aa25.12■■□□□ 1.61
PMPCB-205ENST00000453466 RTL9Q8NET4 1388 aa25.12■■□□□ 1.61
PMPCB-205ENST00000453466 AAMPQ13685 434 aa25.12■■□□□ 1.61
PMPCB-205ENST00000453466 INTS3Q68E01 1043 aaKnown RBP25.12■■□□□ 1.61
PMPCB-205ENST00000453466 MPNDQ8N594 471 aa25.11■■□□□ 1.61
PMPCB-205ENST00000453466 PANK1Q8TE04 598 aa25.11■■□□□ 1.61
PMPCB-205ENST00000453466 CACNA1SQ13698 1873 aa25.1■■□□□ 1.61
PMPCB-205ENST00000453466 RLBP1P12271 317 aa25.1■■□□□ 1.61
PMPCB-205ENST00000453466 ITGA6P23229 1130 aa25.1■■□□□ 1.61
PMPCB-205ENST00000453466 LMBR1LQ6UX01 489 aa25.1■■□□□ 1.61
PMPCB-205ENST00000453466 CLUAP1Q96AJ1 413 aa25.1■■□□□ 1.61
PMPCB-205ENST00000453466 SUCLG2Q96I99 432 aa25.1■■□□□ 1.61
PMPCB-205ENST00000453466 CHMP3Q9Y3E7 222 aa25.1■■□□□ 1.61
PMPCB-205ENST00000453466 PRELPP51888 382 aa25.09■■□□□ 1.61
PMPCB-205ENST00000453466 EPHA10Q5JZY3 1008 aa25.09■■□□□ 1.61
PMPCB-205ENST00000453466 DPP8Q6V1X1 898 aaPredicted RBP25.09■■□□□ 1.61
PMPCB-205ENST00000453466 FTSJ3Q8IY81 847 aaKnown RBP25.09■■□□□ 1.61
PMPCB-205ENST00000453466 HDAC5Q9UQL6 1122 aa25.09■■□□□ 1.61
PMPCB-205ENST00000453466 ANKRD18BA2A2Z9 1011 aa25.08■■□□□ 1.61
PMPCB-205ENST00000453466 IFIT5Q13325 482 aaKnown RBP25.08■■□□□ 1.61
PMPCB-205ENST00000453466 FAM161AQ3B820 660 aa25.08■■□□□ 1.61
PMPCB-205ENST00000453466 SUPT20HQ8NEM7 779 aa25.08■■□□□ 1.61
PMPCB-205ENST00000453466 ZNF277Q9NRM2 450 aaPredicted RBP25.08■■□□□ 1.61
PMPCB-205ENST00000453466 IGHMBP2P38935 993 aaKnown RBP25.07■■□□□ 1.6
PMPCB-205ENST00000453466 SLC51AQ86UW1 340 aa25.07■■□□□ 1.6
PMPCB-205ENST00000453466 TNNQ9UQP3 1299 aa25.07■■□□□ 1.6
PMPCB-205ENST00000453466 UBTFL1P0CB47 393 aaPredicted RBP25.07■■□□□ 1.6
PMPCB-205ENST00000453466 CCDC57Q2TAC2 916 aa25.07■■□□□ 1.6
PMPCB-205ENST00000453466 KAZALD1Q96I82 304 aa25.07■■□□□ 1.6
PMPCB-205ENST00000453466 BSDC1Q9NW68 430 aaPredicted RBP25.07■■□□□ 1.6
PMPCB-205ENST00000453466 NSFL1CQ9UNZ2 370 aaKnown RBP25.07■■□□□ 1.6
PMPCB-205ENST00000453466 IARSP41252 1262 aaKnown RBP25.06■■□□□ 1.6
PMPCB-205ENST00000453466 MVPQ14764 893 aaKnown RBP25.06■■□□□ 1.6
PMPCB-205ENST00000453466 RTFDC1Q9BY42 306 aaPredicted RBP25.06■■□□□ 1.6
PMPCB-205ENST00000453466 BICC1Q9H694 974 aaKnown RBP25.06■■□□□ 1.6
PMPCB-205ENST00000453466 COG6Q9Y2V7 657 aa25.06■■□□□ 1.6
PMPCB-205ENST00000453466 FER1L6Q2WGJ9 1857 aa25.05■■□□□ 1.6
PMPCB-205ENST00000453466 ZC3H4Q9UPT8 1303 aaKnown RBP25.05■■□□□ 1.6
PMPCB-205ENST00000453466 SNED1Q8TER0 1413 aa25.05■■□□□ 1.6
PMPCB-205ENST00000453466 MPHOSPH8Q99549 860 aa25.05■■□□□ 1.6
PMPCB-205ENST00000453466 VPS33BQ9H267 617 aa25.05■■□□□ 1.6
PMPCB-205ENST00000453466 GNAI3P08754 354 aa25.03■■□□□ 1.6
PMPCB-205ENST00000453466 GPSM2P81274 684 aa25.03■■□□□ 1.6
PMPCB-205ENST00000453466 RABL6Q3YEC7 729 aaPredicted RBP25.03■■□□□ 1.6
PMPCB-205ENST00000453466 TMEM57Q8N5G2 664 aa25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms