RNA–Protein interactions for RNA: ENST00000453337.1

HLA-DPA1-244, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS ALT2

Gene HLA-DPA1, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-244ENST00000453337 SLC16A10Q8TF71 515 aa15.52■□□□□ 0.08
HLA-DPA1-244ENST00000453337 NLRP3Q96P20 1036 aa15.52■□□□□ 0.08
HLA-DPA1-244ENST00000453337 EXOC6BQ9Y2D4 811 aa15.52■□□□□ 0.08
HLA-DPA1-244ENST00000453337 ANKRD18BA2A2Z9 1011 aa15.51■□□□□ 0.07
HLA-DPA1-244ENST00000453337 RFX5P48382 616 aaPredicted RBP15.51■□□□□ 0.07
HLA-DPA1-244ENST00000453337 OS9Q13438 667 aaPredicted RBP15.51■□□□□ 0.07
HLA-DPA1-244ENST00000453337 CCDC152Q4G0S7 254 aa15.51■□□□□ 0.07
HLA-DPA1-244ENST00000453337 CNBD1Q8NA66 436 aa15.51■□□□□ 0.07
HLA-DPA1-244ENST00000453337 LRRCC1Q9C099 1032 aa15.51■□□□□ 0.07
HLA-DPA1-244ENST00000453337 FBXO3Q9UK99 471 aa15.51■□□□□ 0.07
HLA-DPA1-244ENST00000453337 LAMB2P55268 1798 aa15.51■□□□□ 0.07
HLA-DPA1-244ENST00000453337 DDX60Q8IY21 1712 aaKnown RBP15.51■□□□□ 0.07
HLA-DPA1-244ENST00000453337 ST5P78524 1137 aa15.5■□□□□ 0.07
HLA-DPA1-244ENST00000453337 PTPN12Q05209 780 aaKnown RBP15.5■□□□□ 0.07
HLA-DPA1-244ENST00000453337 SF3B3Q15393 1217 aaKnown RBP15.5■□□□□ 0.07
HLA-DPA1-244ENST00000453337 TAF7LQ5H9L4 462 aa15.5■□□□□ 0.07
HLA-DPA1-244ENST00000453337 KIF1BPQ96EK5 621 aa15.5■□□□□ 0.07
HLA-DPA1-244ENST00000453337 PA2G4Q9UQ80 394 aaKnown RBP15.5■□□□□ 0.07
HLA-DPA1-244ENST00000453337 PARP3Q9Y6F1 533 aa15.5■□□□□ 0.07
HLA-DPA1-244ENST00000453337 APBB1O00213 710 aa15.49■□□□□ 0.07
HLA-DPA1-244ENST00000453337 POLRMTO00411 1230 aaKnown RBP15.49■□□□□ 0.07
HLA-DPA1-244ENST00000453337 LNPKQ9C0E8 428 aa15.49■□□□□ 0.07
HLA-DPA1-244ENST00000453337 RTL9Q8NET4 1388 aa15.49■□□□□ 0.07
HLA-DPA1-244ENST00000453337 ITGA6P23229 1130 aa15.48■□□□□ 0.07
HLA-DPA1-244ENST00000453337 FAM161AQ3B820 660 aa15.48■□□□□ 0.07
HLA-DPA1-244ENST00000453337 PRR5LQ6MZQ0 368 aa15.48■□□□□ 0.07
HLA-DPA1-244ENST00000453337 RHPN1Q8TCX5 695 aa15.48■□□□□ 0.07
HLA-DPA1-244ENST00000453337 GREM2Q9H772 168 aa15.48■□□□□ 0.07
HLA-DPA1-244ENST00000453337 CIAO1O76071 339 aa15.47■□□□□ 0.07
HLA-DPA1-244ENST00000453337 MMP10P09238 476 aa15.47■□□□□ 0.07
HLA-DPA1-244ENST00000453337 DDR1Q08345 913 aa15.47■□□□□ 0.07
HLA-DPA1-244ENST00000453337 CCDC85AQ96PX6 553 aaPredicted RBP15.47■□□□□ 0.07
HLA-DPA1-244ENST00000453337 SIL1Q9H173 461 aa15.47■□□□□ 0.07
HLA-DPA1-244ENST00000453337 EYA2O00167 538 aa15.46■□□□□ 0.07
HLA-DPA1-244ENST00000453337 IL15P40933 162 aaPredicted RBP15.46■□□□□ 0.07
HLA-DPA1-244ENST00000453337 CLASRPQ8N2M8 674 aaKnown RBP15.46■□□□□ 0.07
HLA-DPA1-244ENST00000453337 KLHDC4Q8TBB5 520 aa15.46■□□□□ 0.07
HLA-DPA1-244ENST00000453337 CDC5LQ99459 802 aaKnown RBP15.46■□□□□ 0.07
HLA-DPA1-244ENST00000453337 RIC1Q4ADV7 1423 aa15.45■□□□□ 0.06
HLA-DPA1-244ENST00000453337 SMARCA5O60264 1052 aaPredicted RBP15.45■□□□□ 0.06
HLA-DPA1-244ENST00000453337 RGS3P49796 1198 aa15.45■□□□□ 0.06
HLA-DPA1-244ENST00000453337 MSL1Q68DK7 614 aa15.45■□□□□ 0.06
HLA-DPA1-244ENST00000453337 LDHAL6AQ6ZMR3 332 aa15.45■□□□□ 0.06
HLA-DPA1-244ENST00000453337 ZNF594Q96JF6 807 aaPredicted RBP15.45■□□□□ 0.06
HLA-DPA1-244ENST00000453337 BRIP1Q9BX63 1249 aa15.45■□□□□ 0.06
HLA-DPA1-244ENST00000453337 ABCC12Q96J65 1359 aa15.45■□□□□ 0.06
HLA-DPA1-244ENST00000453337 CASZ1Q86V15 1759 aa15.44■□□□□ 0.06
HLA-DPA1-244ENST00000453337 SASH1O94885 1247 aa15.44■□□□□ 0.06
HLA-DPA1-244ENST00000453337 IGHMBP2P38935 993 aaKnown RBP15.44■□□□□ 0.06
HLA-DPA1-244ENST00000453337 DDX46Q7L014 1031 aaKnown RBP15.44■□□□□ 0.06
HLA-DPA1-244ENST00000453337 CCDC24Q8N4L8 307 aa15.44■□□□□ 0.06
HLA-DPA1-244ENST00000453337 MPHOSPH8Q99549 860 aa15.44■□□□□ 0.06
HLA-DPA1-244ENST00000453337 CEP126Q9P2H0 1117 aa15.44■□□□□ 0.06
HLA-DPA1-244ENST00000453337 NRXN2Q9P2S2 1712 aa15.43■□□□□ 0.06
HLA-DPA1-244ENST00000453337 PDE4AP27815 886 aa15.43■□□□□ 0.06
HLA-DPA1-244ENST00000453337 ATG9AQ7Z3C6 839 aa15.43■□□□□ 0.06
HLA-DPA1-244ENST00000453337 ANKRD18AQ8IVF6 992 aa15.43■□□□□ 0.06
HLA-DPA1-244ENST00000453337 IL1RAPL2Q9NP60 686 aa15.43■□□□□ 0.06
HLA-DPA1-244ENST00000453337 CNNM1Q9NRU3 951 aa15.43■□□□□ 0.06
HLA-DPA1-244ENST00000453337 RIPOR2Q9Y4F9 1068 aa15.43■□□□□ 0.06
HLA-DPA1-244ENST00000453337 KLRG2A4D1S0 409 aaPredicted RBP15.42■□□□□ 0.06
HLA-DPA1-244ENST00000453337 PDE6BP35913 854 aa15.42■□□□□ 0.06
HLA-DPA1-244ENST00000453337 RPS8P62241 208 aaKnown RBP15.42■□□□□ 0.06
HLA-DPA1-244ENST00000453337 LRRC24Q50LG9 513 aa15.42■□□□□ 0.06
HLA-DPA1-244ENST00000453337 ILDR2Q71H61 639 aa15.42■□□□□ 0.06
HLA-DPA1-244ENST00000453337 C16orf71Q8IYS4 520 aaPredicted RBP15.42■□□□□ 0.06
HLA-DPA1-244ENST00000453337 PUS3Q9BZE2 481 aaKnown RBP15.42■□□□□ 0.06
HLA-DPA1-244ENST00000453337 BCL11AQ9H165 835 aa15.42■□□□□ 0.06
HLA-DPA1-244ENST00000453337 GPR108Q9NPR9 543 aa15.42■□□□□ 0.06
HLA-DPA1-244ENST00000453337 SEC31BQ9NQW1 1179 aa15.42■□□□□ 0.06
HLA-DPA1-244ENST00000453337 IFIT2P09913 472 aaKnown RBP15.41■□□□□ 0.06
HLA-DPA1-244ENST00000453337 TFCP2Q12800 502 aa15.41■□□□□ 0.06
HLA-DPA1-244ENST00000453337 C3orf67Q6ZVT6 689 aa15.41■□□□□ 0.06
HLA-DPA1-244ENST00000453337 PLEKHM2Q8IWE5 1019 aa15.41■□□□□ 0.06
HLA-DPA1-244ENST00000453337 RPGRQ92834 1020 aaKnown RBP15.41■□□□□ 0.06
HLA-DPA1-244ENST00000453337 RBM17Q96I25 401 aaKnown RBP15.41■□□□□ 0.06
HLA-DPA1-244ENST00000453337 PDGFDQ9GZP0 370 aaPredicted RBP15.41■□□□□ 0.06
HLA-DPA1-244ENST00000453337 AKAP2Q9Y2D5 859 aa15.41■□□□□ 0.06
HLA-DPA1-244ENST00000453337 MROH5Q6ZUA9 1318 aa15.41■□□□□ 0.06
HLA-DPA1-244ENST00000453337 TAF1P21675 1872 aa15.4■□□□□ 0.06
HLA-DPA1-244ENST00000453337 R3HDM1Q15032 1099 aaKnown RBP15.4■□□□□ 0.06
HLA-DPA1-244ENST00000453337 CRY2Q49AN0 593 aa15.4■□□□□ 0.06
HLA-DPA1-244ENST00000453337 SKAP1Q86WV1 359 aa15.4■□□□□ 0.06
HLA-DPA1-244ENST00000453337 BSDC1Q9NW68 430 aaPredicted RBP15.4■□□□□ 0.06
HLA-DPA1-244ENST00000453337 HOXA10P31260 410 aaPredicted RBP15.39■□□□□ 0.05
HLA-DPA1-244ENST00000453337 METTL24Q5JXM2 366 aa15.39■□□□□ 0.05
HLA-DPA1-244ENST00000453337 AACSQ86V21 672 aa15.39■□□□□ 0.05
HLA-DPA1-244ENST00000453337 GPATCH3Q96I76 525 aa15.39■□□□□ 0.05
HLA-DPA1-244ENST00000453337 CRAMP1Q96RY5 1269 aa15.39■□□□□ 0.05
HLA-DPA1-244ENST00000453337 MTFR1LQ9H019 292 aa15.39■□□□□ 0.05
HLA-DPA1-244ENST00000453337 OSBPL3Q9H4L5 887 aa15.39■□□□□ 0.05
HLA-DPA1-244ENST00000453337 STAP2Q9UGK3 403 aa15.39■□□□□ 0.05
HLA-DPA1-244ENST00000453337 ANKRD31Q8N7Z5 1873 aa15.38■□□□□ 0.05
HLA-DPA1-244ENST00000453337 BBOX1O75936 387 aa15.38■□□□□ 0.05
HLA-DPA1-244ENST00000453337 MX1P20591 662 aa15.38■□□□□ 0.05
HLA-DPA1-244ENST00000453337 PDE1AP54750 535 aa15.38■□□□□ 0.05
HLA-DPA1-244ENST00000453337 GRAPQ13588 217 aa15.38■□□□□ 0.05
HLA-DPA1-244ENST00000453337 TNNI3KQ59H18 835 aa15.38■□□□□ 0.05
HLA-DPA1-244ENST00000453337 GRAPLQ8TC17 118 aaPredicted RBP15.38■□□□□ 0.05
HLA-DPA1-244ENST00000453337 EAF2Q96CJ1 260 aaPredicted RBP15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms