RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 CCINQ13939 588 aa7.36□□□□□ -1.23
LINC00393-202ENST00000452852 PHLDB3Q6NSJ2 640 aa7.36□□□□□ -1.23
LINC00393-202ENST00000452852 USTQ9Y2C2 406 aa7.36□□□□□ -1.23
LINC00393-202ENST00000452852 CC2D2AQ9P2K1 1620 aa7.36□□□□□ -1.23
LINC00393-202ENST00000452852 SNRPNP63162 240 aaKnown RBP7.35□□□□□ -1.23
LINC00393-202ENST00000452852 RGL4Q8IZJ4 473 aa7.35□□□□□ -1.23
LINC00393-202ENST00000452852 MDFIQ99750 246 aa7.35□□□□□ -1.23
LINC00393-202ENST00000452852 KRTAP9-9Q9BYP9 154 aa7.35□□□□□ -1.23
LINC00393-202ENST00000452852 KRTAP9-4Q9BYQ2 154 aa7.35□□□□□ -1.23
LINC00393-202ENST00000452852 RRAGCQ9HB90 399 aa7.35□□□□□ -1.23
LINC00393-202ENST00000452852 STIM2Q9P246 746 aa7.35□□□□□ -1.23
LINC00393-202ENST00000452852 RTCBQ9Y3I0 505 aaKnown RBP7.35□□□□□ -1.23
LINC00393-202ENST00000452852 ELOA3CA0A087WX78 387 aaPredicted RBP7.34□□□□□ -1.23
LINC00393-202ENST00000452852 ELOA3DA6NLF2 546 aaPredicted RBP7.34□□□□□ -1.23
LINC00393-202ENST00000452852 ADARB2-AS1A8MUL3 147 aa7.34□□□□□ -1.23
LINC00393-202ENST00000452852 ZBTB39O15060 712 aa7.34□□□□□ -1.23
LINC00393-202ENST00000452852 HOXB4P17483 251 aaPredicted RBP7.34□□□□□ -1.23
LINC00393-202ENST00000452852 ELOA3BQ3SY89 546 aa7.34□□□□□ -1.23
LINC00393-202ENST00000452852 CHSY3Q70JA7 882 aa7.34□□□□□ -1.23
LINC00393-202ENST00000452852 CMTR1Q8N1G2 835 aaKnown RBP7.34□□□□□ -1.23
LINC00393-202ENST00000452852 ELOA3Q8NG57 546 aa7.34□□□□□ -1.23
LINC00393-202ENST00000452852 TNFRSF25Q93038 417 aa7.34□□□□□ -1.23
LINC00393-202ENST00000452852 PNMA5Q96PV4 448 aa7.34□□□□□ -1.23
LINC00393-202ENST00000452852 GZF1Q9H116 711 aaPredicted RBP7.34□□□□□ -1.23
LINC00393-202ENST00000452852 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.34□□□□□ -1.23
LINC00393-202ENST00000452852 EIF4G1Q04637 1599 aaKnown RBP7.33□□□□□ -1.24
LINC00393-202ENST00000452852 KRTAP4-8A0A0G2JLE6 195 aa7.33□□□□□ -1.24
LINC00393-202ENST00000452852 NFKB1P19838 968 aa7.33□□□□□ -1.24
LINC00393-202ENST00000452852 KRT25Q7Z3Z0 450 aa7.33□□□□□ -1.24
LINC00393-202ENST00000452852 ALYREFQ86V81 257 aaKnown RBP7.33□□□□□ -1.24
LINC00393-202ENST00000452852 GTF3C2Q8WUA4 911 aaPredicted RBP7.33□□□□□ -1.24
LINC00393-202ENST00000452852 EFCC1Q9HA90 598 aa7.33□□□□□ -1.24
LINC00393-202ENST00000452852 SASH3O75995 380 aa7.32□□□□□ -1.24
LINC00393-202ENST00000452852 ALAS2P22557 587 aa7.32□□□□□ -1.24
LINC00393-202ENST00000452852 TARSP26639 723 aaKnown RBP7.32□□□□□ -1.24
LINC00393-202ENST00000452852 ZAP70P43403 619 aa7.32□□□□□ -1.24
LINC00393-202ENST00000452852 TBC1D8BQ0IIM8 1120 aa7.32□□□□□ -1.24
LINC00393-202ENST00000452852 HELQQ8TDG4 1101 aa7.32□□□□□ -1.24
LINC00393-202ENST00000452852 IGFLR1Q9H665 355 aa7.32□□□□□ -1.24
LINC00393-202ENST00000452852 C11orf16Q9NQ32 467 aa7.32□□□□□ -1.24
LINC00393-202ENST00000452852 ZFATQ9P243 1243 aa7.32□□□□□ -1.24
LINC00393-202ENST00000452852 CECR2Q9BXF3 1484 aa7.31□□□□□ -1.24
LINC00393-202ENST00000452852 XYLBO75191 536 aa7.31□□□□□ -1.24
LINC00393-202ENST00000452852 ADH7P40394 386 aa7.31□□□□□ -1.24
LINC00393-202ENST00000452852 ZMYM1Q5SVZ6 1142 aa7.31□□□□□ -1.24
LINC00393-202ENST00000452852 ABTB2Q8N961 1025 aa7.31□□□□□ -1.24
LINC00393-202ENST00000452852 UBE2OQ9C0C9 1292 aaKnown RBP7.31□□□□□ -1.24
LINC00393-202ENST00000452852 MKL2Q9ULH7 1088 aa7.31□□□□□ -1.24
LINC00393-202ENST00000452852 KCNMB2Q9Y691 235 aa7.31□□□□□ -1.24
LINC00393-202ENST00000452852 EGFRP00533 1210 aa7.3□□□□□ -1.24
LINC00393-202ENST00000452852 DGKGP49619 791 aa7.3□□□□□ -1.24
LINC00393-202ENST00000452852 MTMR3Q13615 1198 aa7.3□□□□□ -1.24
LINC00393-202ENST00000452852 LINC00114Q6XXX2 140 aa7.3□□□□□ -1.24
LINC00393-202ENST00000452852 ATCAYQ86WG3 371 aa7.3□□□□□ -1.24
LINC00393-202ENST00000452852 PIK3R5Q8WYR1 880 aa7.3□□□□□ -1.24
LINC00393-202ENST00000452852 DNAJB12Q9NXW2 375 aaKnown RBP7.3□□□□□ -1.24
LINC00393-202ENST00000452852 SCO2A0A1W2PP80 73 aa7.29□□□□□ -1.24
LINC00393-202ENST00000452852 KRBA1A5PL33 1030 aa7.29□□□□□ -1.24
LINC00393-202ENST00000452852 MAP3K6O95382 1288 aa7.29□□□□□ -1.24
LINC00393-202ENST00000452852 TRIP4Q15650 581 aaPredicted RBP7.29□□□□□ -1.24
LINC00393-202ENST00000452852 TMCO4Q5TGY1 634 aa7.29□□□□□ -1.24
LINC00393-202ENST00000452852 GPR152Q8TDT2 470 aa7.29□□□□□ -1.24
LINC00393-202ENST00000452852 FAM13BQ9NYF5 915 aa7.29□□□□□ -1.24
LINC00393-202ENST00000452852 MTMR7Q9Y216 660 aa7.29□□□□□ -1.24
LINC00393-202ENST00000452852 STARD13Q9Y3M8 1113 aa7.29□□□□□ -1.24
LINC00393-202ENST00000452852 RARAP10276 462 aa7.28□□□□□ -1.24
LINC00393-202ENST00000452852 B4GALNT3Q6L9W6 998 aa7.28□□□□□ -1.24
LINC00393-202ENST00000452852 DHX32Q7L7V1 743 aaKnown RBP7.28□□□□□ -1.24
LINC00393-202ENST00000452852 SLC6A14Q9UN76 642 aa7.28□□□□□ -1.24
LINC00393-202ENST00000452852 UBAP1LF5GYI3 381 aa7.27□□□□□ -1.25
LINC00393-202ENST00000452852 M0R082 166 aa7.27□□□□□ -1.25
LINC00393-202ENST00000452852 ABL1P00519 1130 aa7.27□□□□□ -1.25
LINC00393-202ENST00000452852 ALBP02768 609 aa7.27□□□□□ -1.25
LINC00393-202ENST00000452852 MPSTP25325 297 aa7.27□□□□□ -1.25
LINC00393-202ENST00000452852 PDE4CQ08493 712 aa7.27□□□□□ -1.25
LINC00393-202ENST00000452852 NOM1Q5C9Z4 860 aaKnown RBP7.27□□□□□ -1.25
LINC00393-202ENST00000452852 RGS22Q8NE09 1264 aa7.27□□□□□ -1.25
LINC00393-202ENST00000452852 ZNF417Q8TAU3 575 aa7.27□□□□□ -1.25
LINC00393-202ENST00000452852 ZNF587Q96SQ5 575 aaPredicted RBP7.27□□□□□ -1.25
LINC00393-202ENST00000452852 ANO2Q9NQ90 1003 aa7.27□□□□□ -1.25
LINC00393-202ENST00000452852 ZBTB42B2RXF5 422 aa7.26□□□□□ -1.25
LINC00393-202ENST00000452852 GNB5O14775 395 aa7.26□□□□□ -1.25
LINC00393-202ENST00000452852 EIF1AXP47813 144 aaKnown RBP7.26□□□□□ -1.25
LINC00393-202ENST00000452852 MFAP1P55081 439 aaKnown RBP7.26□□□□□ -1.25
LINC00393-202ENST00000452852 ZNF211Q13398 564 aaPredicted RBP7.26□□□□□ -1.25
LINC00393-202ENST00000452852 C8orf86Q6ZUL3 223 aa7.26□□□□□ -1.25
LINC00393-202ENST00000452852 MICALL1Q8N3F8 863 aa7.26□□□□□ -1.25
LINC00393-202ENST00000452852 SUV39H2Q9H5I1 410 aa7.26□□□□□ -1.25
LINC00393-202ENST00000452852 MMP20O60882 483 aa7.25□□□□□ -1.25
LINC00393-202ENST00000452852 ARID4AP29374 1257 aaPredicted RBP7.25□□□□□ -1.25
LINC00393-202ENST00000452852 MLLT1Q03111 559 aaPredicted RBP7.25□□□□□ -1.25
LINC00393-202ENST00000452852 C20orf204Q6ZNR8 217 aa7.25□□□□□ -1.25
LINC00393-202ENST00000452852 NLRP13Q86W25 1043 aa7.25□□□□□ -1.25
LINC00393-202ENST00000452852 TRPM4Q8TD43 1214 aa7.25□□□□□ -1.25
LINC00393-202ENST00000452852 NUDT16Q96DE0 195 aaKnown RBP7.25□□□□□ -1.25
LINC00393-202ENST00000452852 GOLGA2P5Q9HBQ8 144 aa7.25□□□□□ -1.25
LINC00393-202ENST00000452852 TLR7Q9NYK1 1049 aaKnown RBP7.25□□□□□ -1.25
LINC00393-202ENST00000452852 NAGPAQ9UK23 515 aa7.25□□□□□ -1.25
LINC00393-202ENST00000452852 FNDC3AQ9Y2H6 1198 aaKnown RBP7.25□□□□□ -1.25
LINC00393-202ENST00000452852 CPB1P15086 417 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms