RNA–Protein interactions for RNA: ENST00000452029.1

TMEM87B-202, Transcript of transmembrane protein 87B, humanhuman

TSL 1 (best)

Gene TMEM87B, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM87B-202ENST00000452029 FAM8A1Q9UBU6 413 aa7.02□□□□□ -1.29
TMEM87B-202ENST00000452029 NXF1Q9UBU9 619 aaKnown RBP7.02□□□□□ -1.29
TMEM87B-202ENST00000452029 BCS1LQ9Y276 419 aa7.02□□□□□ -1.29
TMEM87B-202ENST00000452029 NOP58Q9Y2X3 529 aaKnown RBP7.02□□□□□ -1.29
TMEM87B-202ENST00000452029 TRIM32Q13049 653 aa7.01□□□□□ -1.29
TMEM87B-202ENST00000452029 PPP1R26Q5T8A7 1209 aaPredicted RBP7.01□□□□□ -1.29
TMEM87B-202ENST00000452029 CERS3Q8IU89 383 aa7.01□□□□□ -1.29
TMEM87B-202ENST00000452029 NBPF15Q8N660 670 aa7.01□□□□□ -1.29
TMEM87B-202ENST00000452029 CNKSR1Q969H4 720 aa7.01□□□□□ -1.29
TMEM87B-202ENST00000452029 L3MBTL2Q969R5 705 aa7.01□□□□□ -1.29
TMEM87B-202ENST00000452029 SEC16BQ96JE7 1060 aa7.01□□□□□ -1.29
TMEM87B-202ENST00000452029 MRGPRX2Q96LB1 330 aa7.01□□□□□ -1.29
TMEM87B-202ENST00000452029 ESYT1Q9BSJ8 1104 aa7.01□□□□□ -1.29
TMEM87B-202ENST00000452029 PHACTR1Q9C0D0 580 aa7.01□□□□□ -1.29
TMEM87B-202ENST00000452029 FHDC1Q9C0D6 1143 aaPredicted RBP7.01□□□□□ -1.29
TMEM87B-202ENST00000452029 KLHL42Q9P2K6 505 aa7.01□□□□□ -1.29
TMEM87B-202ENST00000452029 ARID4BQ4LE39 1312 aaPredicted RBP7.01□□□□□ -1.29
TMEM87B-202ENST00000452029 RPLP1P05386 114 aaKnown RBP7□□□□□ -1.29
TMEM87B-202ENST00000452029 USP17L7P0C7H9 530 aa7□□□□□ -1.29
TMEM87B-202ENST00000452029 ARID5BQ14865 1188 aa7□□□□□ -1.29
TMEM87B-202ENST00000452029 IRF7Q92985 503 aa7□□□□□ -1.29
TMEM87B-202ENST00000452029 RNPC3Q96LT9 517 aaKnown RBP7□□□□□ -1.29
TMEM87B-202ENST00000452029 ZNF408Q9H9D4 720 aa7□□□□□ -1.29
TMEM87B-202ENST00000452029 FOXD3Q9UJU5 478 aaPredicted RBP7□□□□□ -1.29
TMEM87B-202ENST00000452029 ZNF232Q9UNY5 417 aa7□□□□□ -1.29
TMEM87B-202ENST00000452029 TNFRSF21O75509 655 aa6.99□□□□□ -1.29
TMEM87B-202ENST00000452029 CLSTN1O94985 981 aa6.99□□□□□ -1.29
TMEM87B-202ENST00000452029 IBSPP21815 317 aaPredicted RBP6.99□□□□□ -1.29
TMEM87B-202ENST00000452029 RNF187Q5TA31 235 aaPredicted RBP6.99□□□□□ -1.29
TMEM87B-202ENST00000452029 C1orf53Q5VUE5 145 aa6.99□□□□□ -1.29
TMEM87B-202ENST00000452029 XKR5Q6UX68 686 aa6.99□□□□□ -1.29
TMEM87B-202ENST00000452029 CCDC116Q8IYX3 515 aa6.99□□□□□ -1.29
TMEM87B-202ENST00000452029 MPNDQ8N594 471 aa6.99□□□□□ -1.29
TMEM87B-202ENST00000452029 KDF1Q8NAX2 398 aaPredicted RBP6.99□□□□□ -1.29
TMEM87B-202ENST00000452029 ZCRB1Q8TBF4 217 aaKnown RBP6.99□□□□□ -1.29
TMEM87B-202ENST00000452029 KBTBD4Q9NVX7 518 aa6.99□□□□□ -1.29
TMEM87B-202ENST00000452029 IFT57Q9NWB7 429 aa6.99□□□□□ -1.29
TMEM87B-202ENST00000452029 COL4A3BPQ9Y5P4 624 aa6.99□□□□□ -1.29
TMEM87B-202ENST00000452029 PARP3Q9Y6F1 533 aa6.99□□□□□ -1.29
TMEM87B-202ENST00000452029 ANAPC15P60006 121 aa6.98□□□□□ -1.29
TMEM87B-202ENST00000452029 SRCIN1Q9C0H9 1055 aa6.98□□□□□ -1.29
TMEM87B-202ENST00000452029 ZFYVE28Q9HCC9 887 aa6.98□□□□□ -1.29
TMEM87B-202ENST00000452029 PCDH12Q9NPG4 1184 aa6.98□□□□□ -1.29
TMEM87B-202ENST00000452029 CABP1Q9NZU7 370 aa6.98□□□□□ -1.29
TMEM87B-202ENST00000452029 SIRPGQ9P1W8 387 aa6.98□□□□□ -1.29
TMEM87B-202ENST00000452029 SUGT1Q9Y2Z0 365 aa6.98□□□□□ -1.29
TMEM87B-202ENST00000452029 PPME1Q9Y570 386 aa6.98□□□□□ -1.29
TMEM87B-202ENST00000452029 KLF4O43474 513 aa6.97□□□□□ -1.29
TMEM87B-202ENST00000452029 MICAL2O94851 1124 aa6.97□□□□□ -1.29
TMEM87B-202ENST00000452029 SSBP05455 408 aaKnown RBP eCLIP6.97□□□□□ -1.29
TMEM87B-202ENST00000452029 ETFBP38117 255 aa6.97□□□□□ -1.29
TMEM87B-202ENST00000452029 CLN3Q13286 438 aa6.97□□□□□ -1.29
TMEM87B-202ENST00000452029 PLEKHG4Q58EX7 1191 aa6.97□□□□□ -1.29
TMEM87B-202ENST00000452029 NXPE4Q6UWF7 544 aa6.97□□□□□ -1.29
TMEM87B-202ENST00000452029 TTC16Q8NEE8 873 aa6.97□□□□□ -1.29
TMEM87B-202ENST00000452029 C7orf43Q8WVR3 580 aa6.97□□□□□ -1.29
TMEM87B-202ENST00000452029 SPON2Q9BUD6 331 aa6.97□□□□□ -1.29
TMEM87B-202ENST00000452029 RSRP1Q9BUV0 290 aa6.97□□□□□ -1.29
TMEM87B-202ENST00000452029 NOC4LQ9BVI4 516 aaKnown RBP6.97□□□□□ -1.29
TMEM87B-202ENST00000452029 FAM13BQ9NYF5 915 aa6.97□□□□□ -1.29
TMEM87B-202ENST00000452029 ADAMTS1Q9UHI8 967 aa6.97□□□□□ -1.29
TMEM87B-202ENST00000452029 ERBB4Q15303 1308 aa6.97□□□□□ -1.29
TMEM87B-202ENST00000452029 PARNO95453 639 aaKnown RBP6.96□□□□□ -1.3
TMEM87B-202ENST00000452029 NASPP49321 788 aaPredicted RBP6.96□□□□□ -1.3
TMEM87B-202ENST00000452029 CENPCQ03188 943 aa6.96□□□□□ -1.3
TMEM87B-202ENST00000452029 FILIP1Q7Z7B0 1213 aa6.96□□□□□ -1.3
TMEM87B-202ENST00000452029 PPARGC1BQ86YN6 1023 aaKnown RBP6.96□□□□□ -1.3
TMEM87B-202ENST00000452029 RPUSD2Q8IZ73 545 aaKnown RBP6.96□□□□□ -1.3
TMEM87B-202ENST00000452029 EHBP1Q8NDI1 1231 aa6.96□□□□□ -1.3
TMEM87B-202ENST00000452029 TLL2Q9Y6L7 1015 aa6.96□□□□□ -1.3
TMEM87B-202ENST00000452029 SIAH2O43255 324 aa6.95□□□□□ -1.3
TMEM87B-202ENST00000452029 ADH1CP00326 375 aa6.95□□□□□ -1.3
TMEM87B-202ENST00000452029 NR3C2P08235 984 aa6.95□□□□□ -1.3
TMEM87B-202ENST00000452029 BMP1P13497 986 aa6.95□□□□□ -1.3
TMEM87B-202ENST00000452029 TXLNAP40222 546 aa6.95□□□□□ -1.3
TMEM87B-202ENST00000452029 MAP3K10Q02779 954 aa6.95□□□□□ -1.3
TMEM87B-202ENST00000452029 NR5A1Q13285 461 aa6.95□□□□□ -1.3
TMEM87B-202ENST00000452029 RAB33AQ14088 237 aa6.95□□□□□ -1.3
TMEM87B-202ENST00000452029 ANKS3Q6ZW76 656 aa6.95□□□□□ -1.3
TMEM87B-202ENST00000452029 KIAA0825Q8IV33 1275 aa6.95□□□□□ -1.3
TMEM87B-202ENST00000452029 SNX29Q8TEQ0 813 aa6.95□□□□□ -1.3
TMEM87B-202ENST00000452029 EAF1Q96JC9 268 aaPredicted RBP6.95□□□□□ -1.3
TMEM87B-202ENST00000452029 SRPK1Q96SB4 655 aaKnown RBP6.95□□□□□ -1.3
TMEM87B-202ENST00000452029 BCO2Q9BYV7 579 aa6.95□□□□□ -1.3
TMEM87B-202ENST00000452029 NPHS2Q9NP85 383 aa6.95□□□□□ -1.3
TMEM87B-202ENST00000452029 SLC52A1Q9NWF4 448 aa6.95□□□□□ -1.3
TMEM87B-202ENST00000452029 SNTG2Q9NY99 539 aa6.95□□□□□ -1.3
TMEM87B-202ENST00000452029 FAM221BA6H8Z2 402 aa6.94□□□□□ -1.3
TMEM87B-202ENST00000452029 H3BM21 787 aa6.94□□□□□ -1.3
TMEM87B-202ENST00000452029 ADH1AP07327 375 aa6.94□□□□□ -1.3
TMEM87B-202ENST00000452029 RASA3Q14644 834 aa6.94□□□□□ -1.3
TMEM87B-202ENST00000452029 RC3H1Q5TC82 1133 aaKnown RBP6.94□□□□□ -1.3
TMEM87B-202ENST00000452029 CCDC181Q5TID7 509 aa6.94□□□□□ -1.3
TMEM87B-202ENST00000452029 GINM1Q9NU53 330 aa6.94□□□□□ -1.3
TMEM87B-202ENST00000452029 EFR3BQ9Y2G0 817 aa6.94□□□□□ -1.3
TMEM87B-202ENST00000452029 MRVI1Q9Y6F6 885 aa6.94□□□□□ -1.3
TMEM87B-202ENST00000452029 TTBK1Q5TCY1 1321 aaPredicted RBP6.94□□□□□ -1.3
TMEM87B-202ENST00000452029 TGFBR3LH3BV60 316 aa6.93□□□□□ -1.3
TMEM87B-202ENST00000452029 DNAJC6O75061 913 aa6.93□□□□□ -1.3
TMEM87B-202ENST00000452029 SOX9P48436 509 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms