RNA–Protein interactions for RNA: ENST00000451405.1

RPUSD3-209, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 5

Gene RPUSD3, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-209ENST00000451405 LMOD1P29536 600 aaPredicted RBP21.33■■□□□ 1.01
RPUSD3-209ENST00000451405 ZEB1P37275 1124 aaPredicted RBP21.33■■□□□ 1.01
RPUSD3-209ENST00000451405 C8orf58Q8NAV2 365 aa21.33■■□□□ 1.01
RPUSD3-209ENST00000451405 ABCC4O15439 1325 aa21.32■■□□□ 1
RPUSD3-209ENST00000451405 COL4A5P29400 1685 aa21.32■■□□□ 1
RPUSD3-209ENST00000451405 ATP5J2-PTCD1G3V325 749 aa21.32■■□□□ 1
RPUSD3-209ENST00000451405 EIF6P56537 245 aaKnown RBP21.32■■□□□ 1
RPUSD3-209ENST00000451405 CAPNS2Q96L46 248 aa21.32■■□□□ 1
RPUSD3-209ENST00000451405 ISCA1Q9BUE6 129 aa21.32■■□□□ 1
RPUSD3-209ENST00000451405 PHAXQ9H814 394 aaKnown RBP21.32■■□□□ 1
RPUSD3-209ENST00000451405 HYPKQ9NX55 129 aa21.32■■□□□ 1
RPUSD3-209ENST00000451405 LAMB2P55268 1798 aa21.32■■□□□ 1
RPUSD3-209ENST00000451405 GPR101Q96P66 508 aaPredicted RBP21.31■■□□□ 1
RPUSD3-209ENST00000451405 ATP6V0A2Q9Y487 856 aa21.31■■□□□ 1
RPUSD3-209ENST00000451405 SH3TC1Q8TE82 1336 aa21.3■■□□□ 1
RPUSD3-209ENST00000451405 CALD1Q05682 793 aaKnown RBP21.3■■□□□ 1
RPUSD3-209ENST00000451405 ZNF316A6NFI3 1004 aaPredicted RBP21.29■■□□□ 1
RPUSD3-209ENST00000451405 GRIPAP1Q4V328 841 aa21.29■■□□□ 1
RPUSD3-209ENST00000451405 FAM89AQ96GI7 184 aa21.29■■□□□ 1
RPUSD3-209ENST00000451405 TAF1P21675 1872 aa21.28■■□□□ 1
RPUSD3-209ENST00000451405 CYP4F22Q6NT55 531 aa21.28■■□□□ 1
RPUSD3-209ENST00000451405 TSPYL6Q8N831 410 aa21.28■■□□□ 1
RPUSD3-209ENST00000451405 PCDH10Q9P2E7 1040 aa21.28■■□□□ 1
RPUSD3-209ENST00000451405 BBOX1O75936 387 aa21.27■■□□□ 1
RPUSD3-209ENST00000451405 RGS19P49795 217 aa21.27■■□□□ 1
RPUSD3-209ENST00000451405 SP8Q8IXZ3 490 aa21.27■■□□□ 1
RPUSD3-209ENST00000451405 LARGE2Q8N3Y3 721 aa21.27■■□□□ 1
RPUSD3-209ENST00000451405 RTL5Q5HYW3 569 aaPredicted RBP21.26■□□□□ 0.99
RPUSD3-209ENST00000451405 DDX46Q7L014 1031 aaKnown RBP21.26■□□□□ 0.99
RPUSD3-209ENST00000451405 RIC3Q7Z5B4 369 aa21.26■□□□□ 0.99
RPUSD3-209ENST00000451405 TSR2Q969E8 191 aaKnown RBP21.26■□□□□ 0.99
RPUSD3-209ENST00000451405 TRIM28Q13263 835 aaKnown RBP21.25■□□□□ 0.99
RPUSD3-209ENST00000451405 GRAPQ13588 217 aa21.25■□□□□ 0.99
RPUSD3-209ENST00000451405 AOC3Q16853 763 aa21.25■□□□□ 0.99
RPUSD3-209ENST00000451405 DDX60Q8IY21 1712 aaKnown RBP21.25■□□□□ 0.99
RPUSD3-209ENST00000451405 GRAPLQ8TC17 118 aaPredicted RBP21.25■□□□□ 0.99
RPUSD3-209ENST00000451405 TSKSQ9UJT2 592 aa21.25■□□□□ 0.99
RPUSD3-209ENST00000451405 PPIP5K2O43314 1243 aa21.24■□□□□ 0.99
RPUSD3-209ENST00000451405 EPS15P42566 896 aa21.24■□□□□ 0.99
RPUSD3-209ENST00000451405 FMR1Q06787 632 aaKnown RBP eCLIP21.24■□□□□ 0.99
RPUSD3-209ENST00000451405 RTFDC1Q9BY42 306 aaPredicted RBP21.24■□□□□ 0.99
RPUSD3-209ENST00000451405 TMX4Q9H1E5 349 aaPredicted RBP21.24■□□□□ 0.99
RPUSD3-209ENST00000451405 MAP2K2P36507 400 aa21.23■□□□□ 0.99
RPUSD3-209ENST00000451405 SF3B3Q15393 1217 aaKnown RBP21.23■□□□□ 0.99
RPUSD3-209ENST00000451405 CCDC27Q2M243 656 aa21.23■□□□□ 0.99
RPUSD3-209ENST00000451405 USP50Q70EL3 339 aaPredicted RBP21.23■□□□□ 0.99
RPUSD3-209ENST00000451405 WWC1Q8IX03 1113 aa21.23■□□□□ 0.99
RPUSD3-209ENST00000451405 MPNDQ8N594 471 aa21.23■□□□□ 0.99
RPUSD3-209ENST00000451405 MRS2Q9HD23 443 aa21.23■□□□□ 0.99
RPUSD3-209ENST00000451405 TRAF5O00463 557 aa21.22■□□□□ 0.99
RPUSD3-209ENST00000451405 GOLGA2Q08379 1002 aa21.22■□□□□ 0.99
RPUSD3-209ENST00000451405 DPP8Q6V1X1 898 aaPredicted RBP21.22■□□□□ 0.99
RPUSD3-209ENST00000451405 CELF1Q92879 486 aaKnown RBP21.22■□□□□ 0.99
RPUSD3-209ENST00000451405 MYD88Q99836 296 aa21.22■□□□□ 0.99
RPUSD3-209ENST00000451405 IRS4O14654 1257 aaPredicted RBP21.21■□□□□ 0.99
RPUSD3-209ENST00000451405 AOC2O75106 756 aa21.21■□□□□ 0.99
RPUSD3-209ENST00000451405 CCDC30Q5VVM6 783 aa21.21■□□□□ 0.99
RPUSD3-209ENST00000451405 CST9Q5W186 159 aa21.21■□□□□ 0.99
RPUSD3-209ENST00000451405 NIM1KQ8IY84 436 aa21.21■□□□□ 0.99
RPUSD3-209ENST00000451405 VPS33BQ9H267 617 aa21.21■□□□□ 0.99
RPUSD3-209ENST00000451405 TLL2Q9Y6L7 1015 aa21.21■□□□□ 0.99
RPUSD3-209ENST00000451405 COL4A1P02462 1669 aa21.21■□□□□ 0.99
RPUSD3-209ENST00000451405 LTBP1Q14766 1721 aa21.21■□□□□ 0.99
RPUSD3-209ENST00000451405 ANP32CO43423 234 aa21.2■□□□□ 0.98
RPUSD3-209ENST00000451405 CA12O43570 354 aa21.2■□□□□ 0.98
RPUSD3-209ENST00000451405 SCNN1DP51172 638 aa21.2■□□□□ 0.98
RPUSD3-209ENST00000451405 SUPT20HQ8NEM7 779 aa21.2■□□□□ 0.98
RPUSD3-209ENST00000451405 JARID2Q92833 1246 aaPredicted RBP21.2■□□□□ 0.98
RPUSD3-209ENST00000451405 ADAMTSL1Q8N6G6 1762 aa21.2■□□□□ 0.98
RPUSD3-209ENST00000451405 CXCL9Q07325 125 aa21.19■□□□□ 0.98
RPUSD3-209ENST00000451405 MCOLN1Q9GZU1 580 aa21.19■□□□□ 0.98
RPUSD3-209ENST00000451405 ZBTB38Q8NAP3 1195 aaPredicted RBP21.18■□□□□ 0.98
RPUSD3-209ENST00000451405 METTL22Q9BUU2 404 aaPredicted RBP21.18■□□□□ 0.98
RPUSD3-209ENST00000451405 ZNRF3Q9ULT6 936 aa21.18■□□□□ 0.98
RPUSD3-209ENST00000451405 SALL2Q9Y467 1007 aaPredicted RBP21.18■□□□□ 0.98
RPUSD3-209ENST00000451405 CELF2O95319 508 aaKnown RBP21.17■□□□□ 0.98
RPUSD3-209ENST00000451405 KIAA2012Q0VF49 1180 aa21.17■□□□□ 0.98
RPUSD3-209ENST00000451405 DGKZQ13574 1117 aa21.16■□□□□ 0.98
RPUSD3-209ENST00000451405 G2E3Q7L622 706 aa21.16■□□□□ 0.98
RPUSD3-209ENST00000451405 TMC4Q7Z404 712 aa21.16■□□□□ 0.98
RPUSD3-209ENST00000451405 CCDC191Q8NCU4 936 aa21.16■□□□□ 0.98
RPUSD3-209ENST00000451405 SEC31BQ9NQW1 1179 aa21.16■□□□□ 0.98
RPUSD3-209ENST00000451405 ADARB2Q9NS39 739 aaKnown RBP21.16■□□□□ 0.98
RPUSD3-209ENST00000451405 MAP3K2Q9Y2U5 619 aa21.16■□□□□ 0.98
RPUSD3-209ENST00000451405 PI4KAP2A4QPH2 592 aa21.15■□□□□ 0.98
RPUSD3-209ENST00000451405 PCCAP05165 728 aaPredicted RBP21.15■□□□□ 0.98
RPUSD3-209ENST00000451405 TWISTNBQ3B726 338 aaPredicted RBP21.15■□□□□ 0.98
RPUSD3-209ENST00000451405 NCBP3Q53F19 620 aaKnown RBP21.15■□□□□ 0.98
RPUSD3-209ENST00000451405 PI4KAP1Q8N8J0 262 aa21.15■□□□□ 0.98
RPUSD3-209ENST00000451405 CHMP4AQ9BY43 222 aa21.15■□□□□ 0.98
RPUSD3-209ENST00000451405 CWC25Q9NXE8 425 aaPredicted RBP21.15■□□□□ 0.98
RPUSD3-209ENST00000451405 NSFL1CQ9UNZ2 370 aaKnown RBP21.15■□□□□ 0.98
RPUSD3-209ENST00000451405 DUOX1Q9NRD9 1551 aa21.14■□□□□ 0.98
RPUSD3-209ENST00000451405 IL16Q14005 1332 aa21.14■□□□□ 0.97
RPUSD3-209ENST00000451405 YDJCA8MPS7 323 aa21.14■□□□□ 0.97
RPUSD3-209ENST00000451405 DDX58O95786 925 aaKnown RBP21.14■□□□□ 0.97
RPUSD3-209ENST00000451405 RPS8P62241 208 aaKnown RBP21.14■□□□□ 0.97
RPUSD3-209ENST00000451405 GPSM2P81274 684 aa21.14■□□□□ 0.97
RPUSD3-209ENST00000451405 KSR2Q6VAB6 950 aa21.14■□□□□ 0.97
RPUSD3-209ENST00000451405 SAPCD2Q86UD0 394 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms