RNA–Protein interactions for RNA: ENST00000450882.1

MRPL28-206, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 3

Gene MRPL28, Length 619 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-206ENST00000450882 ZKSCAN2Q63HK3 967 aa20.55■□□□□ 0.88
MRPL28-206ENST00000450882 GRAPQ13588 217 aa20.54■□□□□ 0.88
MRPL28-206ENST00000450882 CCDC93Q567U6 631 aa20.54■□□□□ 0.88
MRPL28-206ENST00000450882 ATF7IPQ6VMQ6 1270 aa20.54■□□□□ 0.88
MRPL28-206ENST00000450882 GRAPLQ8TC17 118 aaPredicted RBP20.54■□□□□ 0.88
MRPL28-206ENST00000450882 BBOX1O75936 387 aa20.53■□□□□ 0.88
MRPL28-206ENST00000450882 CASP7P55210 303 aa20.53■□□□□ 0.88
MRPL28-206ENST00000450882 RCAN3Q9UKA8 241 aa20.53■□□□□ 0.88
MRPL28-206ENST00000450882 TRIM27P14373 513 aa20.52■□□□□ 0.88
MRPL28-206ENST00000450882 CLUAP1Q96AJ1 413 aa20.52■□□□□ 0.88
MRPL28-206ENST00000450882 PLA2G12BQ9BX93 195 aa20.52■□□□□ 0.88
MRPL28-206ENST00000450882 CHD4Q14839 1912 aa20.52■□□□□ 0.88
MRPL28-206ENST00000450882 MYH3P11055 1940 aa20.51■□□□□ 0.87
MRPL28-206ENST00000450882 RASSF7Q02833 373 aa20.51■□□□□ 0.87
MRPL28-206ENST00000450882 CC2D2BQ6DHV5 1058 aa20.51■□□□□ 0.87
MRPL28-206ENST00000450882 OLFM4Q6UX06 510 aa20.51■□□□□ 0.87
MRPL28-206ENST00000450882 FTSJ3Q8IY81 847 aaKnown RBP20.51■□□□□ 0.87
MRPL28-206ENST00000450882 TTLL11Q8NHH1 800 aa20.51■□□□□ 0.87
MRPL28-206ENST00000450882 C7orf43Q8WVR3 580 aa20.51■□□□□ 0.87
MRPL28-206ENST00000450882 CHMP3Q9Y3E7 222 aa20.51■□□□□ 0.87
MRPL28-206ENST00000450882 TMC4Q7Z404 712 aa20.5■□□□□ 0.87
MRPL28-206ENST00000450882 RTKN2Q8IZC4 609 aa20.5■□□□□ 0.87
MRPL28-206ENST00000450882 SEC31BQ9NQW1 1179 aa20.5■□□□□ 0.87
MRPL28-206ENST00000450882 NFKBIEO00221 500 aa20.49■□□□□ 0.87
MRPL28-206ENST00000450882 NBPF7P0C2Y1 421 aaPredicted RBP20.49■□□□□ 0.87
MRPL28-206ENST00000450882 YY1P25490 414 aa20.49■□□□□ 0.87
MRPL28-206ENST00000450882 CELF1Q92879 486 aaKnown RBP20.49■□□□□ 0.87
MRPL28-206ENST00000450882 CDC5LQ99459 802 aaKnown RBP20.49■□□□□ 0.87
MRPL28-206ENST00000450882 TAOK3Q9H2K8 898 aa20.49■□□□□ 0.87
MRPL28-206ENST00000450882 GREM2Q9H772 168 aa20.49■□□□□ 0.87
MRPL28-206ENST00000450882 ATP6V0A2Q9Y487 856 aa20.49■□□□□ 0.87
MRPL28-206ENST00000450882 RPS8P62241 208 aaKnown RBP20.48■□□□□ 0.87
MRPL28-206ENST00000450882 INTS3Q68E01 1043 aaKnown RBP20.48■□□□□ 0.87
MRPL28-206ENST00000450882 ANKRD18AQ8IVF6 992 aa20.48■□□□□ 0.87
MRPL28-206ENST00000450882 SUCLG2Q96I99 432 aa20.48■□□□□ 0.87
MRPL28-206ENST00000450882 USP44Q9H0E7 712 aa20.48■□□□□ 0.87
MRPL28-206ENST00000450882 TNNQ9UQP3 1299 aa20.48■□□□□ 0.87
MRPL28-206ENST00000450882 UTYO14607 1347 aa20.48■□□□□ 0.87
MRPL28-206ENST00000450882 TAF1P21675 1872 aa20.47■□□□□ 0.87
MRPL28-206ENST00000450882 UBTFL1P0CB47 393 aaPredicted RBP20.47■□□□□ 0.87
MRPL28-206ENST00000450882 FAM161AQ3B820 660 aa20.47■□□□□ 0.87
MRPL28-206ENST00000450882 GRIPAP1Q4V328 841 aa20.47■□□□□ 0.87
MRPL28-206ENST00000450882 C9orf131Q5VYM1 1079 aa20.47■□□□□ 0.87
MRPL28-206ENST00000450882 LMBR1LQ6UX01 489 aa20.47■□□□□ 0.87
MRPL28-206ENST00000450882 SP8Q8IXZ3 490 aa20.47■□□□□ 0.87
MRPL28-206ENST00000450882 DZIP1LQ8IYY4 767 aaKnown RBP20.47■□□□□ 0.87
MRPL28-206ENST00000450882 RNF181Q9P0P0 153 aa20.47■□□□□ 0.87
MRPL28-206ENST00000450882 RTL9Q8NET4 1388 aa20.46■□□□□ 0.87
MRPL28-206ENST00000450882 CSF1RP07333 972 aa20.46■□□□□ 0.87
MRPL28-206ENST00000450882 LMNB1P20700 586 aa20.46■□□□□ 0.87
MRPL28-206ENST00000450882 FOXO4P98177 505 aa20.46■□□□□ 0.87
MRPL28-206ENST00000450882 FKBP4Q02790 459 aaKnown RBP eCLIP20.46■□□□□ 0.87
MRPL28-206ENST00000450882 HDAC5Q9UQL6 1122 aa20.46■□□□□ 0.87
MRPL28-206ENST00000450882 LTBP3Q9NS15 1303 aa20.46■□□□□ 0.87
MRPL28-206ENST00000450882 FER1L6Q2WGJ9 1857 aa20.45■□□□□ 0.86
MRPL28-206ENST00000450882 ANKRD18BA2A2Z9 1011 aa20.45■□□□□ 0.86
MRPL28-206ENST00000450882 MS4A1P11836 297 aa20.45■□□□□ 0.86
MRPL28-206ENST00000450882 ITGA6P23229 1130 aa20.45■□□□□ 0.86
MRPL28-206ENST00000450882 IGHMBP2P38935 993 aaKnown RBP20.45■□□□□ 0.86
MRPL28-206ENST00000450882 IFIT5Q13325 482 aaKnown RBP20.45■□□□□ 0.86
MRPL28-206ENST00000450882 EPHA10Q5JZY3 1008 aa20.45■□□□□ 0.86
MRPL28-206ENST00000450882 CCDC57Q2TAC2 916 aa20.44■□□□□ 0.86
MRPL28-206ENST00000450882 TAF7LQ5H9L4 462 aa20.44■□□□□ 0.86
MRPL28-206ENST00000450882 DPP8Q6V1X1 898 aaPredicted RBP20.44■□□□□ 0.86
MRPL28-206ENST00000450882 SLC51AQ86UW1 340 aa20.44■□□□□ 0.86
MRPL28-206ENST00000450882 TMEM57Q8N5G2 664 aa20.44■□□□□ 0.86
MRPL28-206ENST00000450882 BICC1Q9H694 974 aaKnown RBP20.44■□□□□ 0.86
MRPL28-206ENST00000450882 GNAI3P08754 354 aa20.43■□□□□ 0.86
MRPL28-206ENST00000450882 MPNDQ8N594 471 aa20.43■□□□□ 0.86
MRPL28-206ENST00000450882 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.43■□□□□ 0.86
MRPL28-206ENST00000450882 PSMD1Q99460 953 aa20.43■□□□□ 0.86
MRPL28-206ENST00000450882 MPHOSPH8Q99549 860 aa20.43■□□□□ 0.86
MRPL28-206ENST00000450882 ITPRIPQ8IWB1 547 aa20.42■□□□□ 0.86
MRPL28-206ENST00000450882 SUPT20HQ8NEM7 779 aa20.42■□□□□ 0.86
MRPL28-206ENST00000450882 MEIS3Q99687 375 aa20.42■□□□□ 0.86
MRPL28-206ENST00000450882 ZNF277Q9NRM2 450 aaPredicted RBP20.42■□□□□ 0.86
MRPL28-206ENST00000450882 NSFL1CQ9UNZ2 370 aaKnown RBP20.42■□□□□ 0.86
MRPL28-206ENST00000450882 COL4A1P02462 1669 aa20.42■□□□□ 0.86
MRPL28-206ENST00000450882 KAZALD1Q96I82 304 aa20.41■□□□□ 0.86
MRPL28-206ENST00000450882 ANKIB1Q9P2G1 1089 aa20.41■□□□□ 0.86
MRPL28-206ENST00000450882 PLIN1O60240 522 aa20.4■□□□□ 0.86
MRPL28-206ENST00000450882 SBF1O95248 1867 aa20.4■□□□□ 0.86
MRPL28-206ENST00000450882 BSDC1Q9NW68 430 aaPredicted RBP20.4■□□□□ 0.86
MRPL28-206ENST00000450882 LRRC37AA6NMS7 1700 aa20.39■□□□□ 0.86
MRPL28-206ENST00000450882 SNED1Q8TER0 1413 aa20.39■□□□□ 0.85
MRPL28-206ENST00000450882 RLBP1P12271 317 aa20.39■□□□□ 0.85
MRPL28-206ENST00000450882 IARSP41252 1262 aaKnown RBP20.39■□□□□ 0.85
MRPL28-206ENST00000450882 PRELPP51888 382 aa20.39■□□□□ 0.85
MRPL28-206ENST00000450882 GPSM2P81274 684 aa20.39■□□□□ 0.85
MRPL28-206ENST00000450882 ANKRD44Q8N8A2 993 aa20.39■□□□□ 0.85
MRPL28-206ENST00000450882 PANK1Q8TE04 598 aa20.39■□□□□ 0.85
MRPL28-206ENST00000450882 LRRFIP2Q9Y608 721 aaKnown RBP20.39■□□□□ 0.85
MRPL28-206ENST00000450882 CCDC88AQ3V6T2 1871 aa20.39■□□□□ 0.85
MRPL28-206ENST00000450882 SPEF2Q9C093 1822 aa20.39■□□□□ 0.85
MRPL28-206ENST00000450882 C6orf229H3BNL8 230 aa20.38■□□□□ 0.85
MRPL28-206ENST00000450882 RABL6Q3YEC7 729 aaPredicted RBP20.38■□□□□ 0.85
MRPL28-206ENST00000450882 PPIP5K2O43314 1243 aa20.37■□□□□ 0.85
MRPL28-206ENST00000450882 LARGE2Q8N3Y3 721 aa20.37■□□□□ 0.85
MRPL28-206ENST00000450882 JDP2Q8WYK2 163 aa20.37■□□□□ 0.85
MRPL28-206ENST00000450882 ZNF594Q96JF6 807 aaPredicted RBP20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms