RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.98□□□□□ -0.65
LINC01961-201ENST00000449954 ZBTB1Q9Y2K1 713 aa10.98□□□□□ -0.65
LINC01961-201ENST00000449954 A0A087WZG4 1122 aa10.97□□□□□ -0.65
LINC01961-201ENST00000449954 ST20-MTHFSA0A0A6YYL1 179 aa10.97□□□□□ -0.65
LINC01961-201ENST00000449954 PPM1GO15355 546 aaPredicted RBP10.97□□□□□ -0.65
LINC01961-201ENST00000449954 MTHFSP49914 203 aa10.97□□□□□ -0.65
LINC01961-201ENST00000449954 SCNN1DP51172 638 aa10.97□□□□□ -0.65
LINC01961-201ENST00000449954 EIF6P56537 245 aaKnown RBP10.97□□□□□ -0.65
LINC01961-201ENST00000449954 AMOTQ4VCS5 1084 aa10.97□□□□□ -0.65
LINC01961-201ENST00000449954 PLEKHO1Q53GL0 409 aaPredicted RBP10.97□□□□□ -0.65
LINC01961-201ENST00000449954 ZNF530Q6P9A1 599 aaPredicted RBP10.97□□□□□ -0.65
LINC01961-201ENST00000449954 NFATC2IPQ8NCF5 419 aa10.97□□□□□ -0.65
LINC01961-201ENST00000449954 CRISPLD2Q9H0B8 497 aa10.97□□□□□ -0.65
LINC01961-201ENST00000449954 ZNF316A6NFI3 1004 aaPredicted RBP10.96□□□□□ -0.65
LINC01961-201ENST00000449954 C1orf141Q5JVX7 400 aa10.96□□□□□ -0.65
LINC01961-201ENST00000449954 TBC1D9BQ66K14 1250 aa10.96□□□□□ -0.65
LINC01961-201ENST00000449954 LARP6Q9BRS8 491 aaKnown RBP10.96□□□□□ -0.65
LINC01961-201ENST00000449954 GJA3Q9Y6H8 435 aa10.96□□□□□ -0.65
LINC01961-201ENST00000449954 EPS15P42566 896 aa10.95□□□□□ -0.66
LINC01961-201ENST00000449954 SPRYD3Q8NCJ5 442 aa10.95□□□□□ -0.66
LINC01961-201ENST00000449954 NPR1P16066 1061 aa10.94□□□□□ -0.66
LINC01961-201ENST00000449954 PPP1R15BQ5SWA1 713 aa10.94□□□□□ -0.66
LINC01961-201ENST00000449954 CCDC24Q8N4L8 307 aa10.94□□□□□ -0.66
LINC01961-201ENST00000449954 PSMD1Q99460 953 aa10.94□□□□□ -0.66
LINC01961-201ENST00000449954 ADARB2Q9NS39 739 aaKnown RBP10.94□□□□□ -0.66
LINC01961-201ENST00000449954 SCN11AQ9UI33 1791 aa10.94□□□□□ -0.66
LINC01961-201ENST00000449954 AKAP11Q9UKA4 1901 aa10.94□□□□□ -0.66
LINC01961-201ENST00000449954 TBC1D12O60347 775 aa10.93□□□□□ -0.66
LINC01961-201ENST00000449954 HUNKP57058 714 aa10.93□□□□□ -0.66
LINC01961-201ENST00000449954 VSIG10Q8N0Z9 540 aa10.93□□□□□ -0.66
LINC01961-201ENST00000449954 SYNE4Q8N205 404 aa10.93□□□□□ -0.66
LINC01961-201ENST00000449954 PTCD2Q8WV60 388 aaKnown RBP10.93□□□□□ -0.66
LINC01961-201ENST00000449954 ZIC5Q96T25 663 aa10.93□□□□□ -0.66
LINC01961-201ENST00000449954 SETDB2Q96T68 719 aa10.93□□□□□ -0.66
LINC01961-201ENST00000449954 RNF186Q9NXI6 227 aa10.93□□□□□ -0.66
LINC01961-201ENST00000449954 MRC1P22897 1456 aa10.93□□□□□ -0.66
LINC01961-201ENST00000449954 TRPA1O75762 1119 aa10.92□□□□□ -0.66
LINC01961-201ENST00000449954 EIF5P55010 431 aaKnown RBP10.92□□□□□ -0.66
LINC01961-201ENST00000449954 EIF4A2Q14240 407 aaKnown RBP10.92□□□□□ -0.66
LINC01961-201ENST00000449954 SLC17A8Q8NDX2 589 aa10.92□□□□□ -0.66
LINC01961-201ENST00000449954 ZC3H15Q8WU90 426 aaKnown RBP10.92□□□□□ -0.66
LINC01961-201ENST00000449954 CCDC102AQ96A19 550 aa10.92□□□□□ -0.66
LINC01961-201ENST00000449954 TESK2Q96S53 571 aa10.92□□□□□ -0.66
LINC01961-201ENST00000449954 KRTAP3-3Q9BYR6 98 aa10.92□□□□□ -0.66
LINC01961-201ENST00000449954 KRTAP3-2Q9BYR7 98 aa10.92□□□□□ -0.66
LINC01961-201ENST00000449954 GLIS2Q9BZE0 524 aaPredicted RBP10.92□□□□□ -0.66
LINC01961-201ENST00000449954 ZNF408Q9H9D4 720 aa10.92□□□□□ -0.66
LINC01961-201ENST00000449954 LHX6Q9UPM6 363 aa10.92□□□□□ -0.66
LINC01961-201ENST00000449954 SNED1Q8TER0 1413 aa10.92□□□□□ -0.66
LINC01961-201ENST00000449954 COL6A3P12111 3177 aa10.91□□□□□ -0.66
LINC01961-201ENST00000449954 FAM155AB1AL88 458 aaPredicted RBP10.91□□□□□ -0.66
LINC01961-201ENST00000449954 CANXP27824 592 aaKnown RBP10.91□□□□□ -0.66
LINC01961-201ENST00000449954 ZNF687Q8N1G0 1237 aa10.91□□□□□ -0.66
LINC01961-201ENST00000449954 GPRC5DQ9NZD1 345 aa10.91□□□□□ -0.66
LINC01961-201ENST00000449954 PGAP2Q9UHJ9 254 aa10.91□□□□□ -0.66
LINC01961-201ENST00000449954 CDHR2Q9BYE9 1310 aa10.9□□□□□ -0.66
LINC01961-201ENST00000449954 HTTP42858 3142 aa10.9□□□□□ -0.66
LINC01961-201ENST00000449954 COL4A5P29400 1685 aa10.9□□□□□ -0.66
LINC01961-201ENST00000449954 KLRG2A4D1S0 409 aaPredicted RBP10.9□□□□□ -0.66
LINC01961-201ENST00000449954 STARD3NLO95772 234 aa10.9□□□□□ -0.66
LINC01961-201ENST00000449954 ALDH1B1P30837 517 aa10.9□□□□□ -0.66
LINC01961-201ENST00000449954 CC2D2BQ6DHV5 1058 aa10.9□□□□□ -0.66
LINC01961-201ENST00000449954 RGMBQ6NW40 437 aa10.9□□□□□ -0.66
LINC01961-201ENST00000449954 CDC37L1Q7L3B6 337 aa10.9□□□□□ -0.66
LINC01961-201ENST00000449954 DDX27Q96GQ7 796 aaKnown RBP10.9□□□□□ -0.66
LINC01961-201ENST00000449954 SLC52A2Q9HAB3 445 aa10.9□□□□□ -0.66
LINC01961-201ENST00000449954 HDAC9Q9UKV0 1011 aa10.9□□□□□ -0.66
LINC01961-201ENST00000449954 BRCA2P51587 3418 aa10.9□□□□□ -0.66
LINC01961-201ENST00000449954 KIF23Q02241 960 aaPredicted RBP10.89□□□□□ -0.67
LINC01961-201ENST00000449954 GRIPAP1Q4V328 841 aa10.89□□□□□ -0.67
LINC01961-201ENST00000449954 FBXO46Q6PJ61 603 aaPredicted RBP10.89□□□□□ -0.67
LINC01961-201ENST00000449954 UBR2Q8IWV8 1755 aa10.89□□□□□ -0.67
LINC01961-201ENST00000449954 CENPFP49454 3210 aa10.88□□□□□ -0.67
LINC01961-201ENST00000449954 OLFM4Q6UX06 510 aa10.88□□□□□ -0.67
LINC01961-201ENST00000449954 SPNS2Q8IVW8 549 aa10.88□□□□□ -0.67
LINC01961-201ENST00000449954 LARGE2Q8N3Y3 721 aa10.88□□□□□ -0.67
LINC01961-201ENST00000449954 POLKQ9UBT6 870 aa10.88□□□□□ -0.67
LINC01961-201ENST00000449954 TRIOBPQ9H2D6 2365 aa10.87□□□□□ -0.67
LINC01961-201ENST00000449954 IL6STP40189 918 aaPredicted RBP10.87□□□□□ -0.67
LINC01961-201ENST00000449954 NPM2Q86SE8 214 aaKnown RBP10.87□□□□□ -0.67
LINC01961-201ENST00000449954 NBPF5PQ86XG9 351 aaPredicted RBP10.87□□□□□ -0.67
LINC01961-201ENST00000449954 NIM1KQ8IY84 436 aa10.87□□□□□ -0.67
LINC01961-201ENST00000449954 RBBP6Q7Z6E9 1792 aaKnown RBP10.86□□□□□ -0.67
LINC01961-201ENST00000449954 RANBP2P49792 3224 aaKnown RBP10.86□□□□□ -0.67
LINC01961-201ENST00000449954 SLC10A3P09131 477 aa10.86□□□□□ -0.67
LINC01961-201ENST00000449954 ZNF157P51786 506 aaPredicted RBP10.86□□□□□ -0.67
LINC01961-201ENST00000449954 C2orf69Q8N8R5 385 aa10.86□□□□□ -0.67
LINC01961-201ENST00000449954 GBA2Q9HCG7 927 aaPredicted RBP10.86□□□□□ -0.67
LINC01961-201ENST00000449954 TBC1D2BQ9UPU7 963 aa10.86□□□□□ -0.67
LINC01961-201ENST00000449954 CAMTA2O94983 1202 aa10.85□□□□□ -0.67
LINC01961-201ENST00000449954 SLC39A6Q13433 755 aa10.85□□□□□ -0.67
LINC01961-201ENST00000449954 NOM1Q5C9Z4 860 aaKnown RBP10.85□□□□□ -0.67
LINC01961-201ENST00000449954 INTS3Q68E01 1043 aaKnown RBP10.85□□□□□ -0.67
LINC01961-201ENST00000449954 OXER1Q8TDS5 423 aa10.85□□□□□ -0.67
LINC01961-201ENST00000449954 ZNF296Q8WUU4 475 aaPredicted RBP10.85□□□□□ -0.67
LINC01961-201ENST00000449954 CSRNP1Q96S65 589 aa10.85□□□□□ -0.67
LINC01961-201ENST00000449954 ZNF330Q9Y3S2 320 aaPredicted RBP10.85□□□□□ -0.67
LINC01961-201ENST00000449954 PITPNM2Q9BZ72 1349 aa10.84□□□□□ -0.67
LINC01961-201ENST00000449954 TEX13AQ9BXU3 409 aaPredicted RBP10.84□□□□□ -0.67
LINC01961-201ENST00000449954 VPS33BQ9H267 617 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms