RNA–Protein interactions for RNA: ENST00000449771.6

RAPGEF3-205, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RAPGEF3, Length 6,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-205ENST00000449771 ALS2CR12Q96Q35 445 aa16.07■□□□□ 0.16
RAPGEF3-205ENST00000449771 UTP14AQ9BVJ6 771 aaKnown RBP16.07■□□□□ 0.16
RAPGEF3-205ENST00000449771 URI1O94763 535 aaPredicted RBP16.06■□□□□ 0.16
RAPGEF3-205ENST00000449771 SLC39A6Q13433 755 aa16.06■□□□□ 0.16
RAPGEF3-205ENST00000449771 MAP9Q49MG5 647 aa16.06■□□□□ 0.16
RAPGEF3-205ENST00000449771 PPP4R3BQ5MIZ7 849 aa16.06■□□□□ 0.16
RAPGEF3-205ENST00000449771 DDX19AQ9NUU7 478 aaKnown RBP16.06■□□□□ 0.16
RAPGEF3-205ENST00000449771 EXOC1Q9NV70 894 aa16.06■□□□□ 0.16
RAPGEF3-205ENST00000449771 TMCO3Q6UWJ1 677 aa16.06■□□□□ 0.16
RAPGEF3-205ENST00000449771 STX1AQ16623 288 aa16.06■□□□□ 0.16
RAPGEF3-205ENST00000449771 ATP2B3Q16720 1220 aa16.05■□□□□ 0.16
RAPGEF3-205ENST00000449771 HEATR3Q7Z4Q2 680 aa16.05■□□□□ 0.16
RAPGEF3-205ENST00000449771 NYXQ9GZU5 481 aa16.05■□□□□ 0.16
RAPGEF3-205ENST00000449771 GCOM1H8Y6P7 765 aaPredicted RBP16.05■□□□□ 0.16
RAPGEF3-205ENST00000449771 STX6O43752 255 aa16.05■□□□□ 0.16
RAPGEF3-205ENST00000449771 MYZAPP0CAP1 466 aa16.05■□□□□ 0.16
RAPGEF3-205ENST00000449771 GTF2A1P52655 376 aaPredicted RBP16.05■□□□□ 0.16
RAPGEF3-205ENST00000449771 KANK3Q6NY19 840 aa16.05■□□□□ 0.16
RAPGEF3-205ENST00000449771 TBC1D9Q6ZT07 1266 aa16.05■□□□□ 0.16
RAPGEF3-205ENST00000449771 TIGD1Q96MW7 591 aa16.05■□□□□ 0.16
RAPGEF3-205ENST00000449771 MCM3P25205 808 aa16.05■□□□□ 0.16
RAPGEF3-205ENST00000449771 COPS6Q7L5N1 327 aa16.05■□□□□ 0.16
RAPGEF3-205ENST00000449771 BCCIPQ9P287 314 aaKnown RBP eCLIP16.05■□□□□ 0.16
RAPGEF3-205ENST00000449771 PARP3Q9Y6F1 533 aa16.05■□□□□ 0.16
RAPGEF3-205ENST00000449771 FBLN1P23142 703 aa16.05■□□□□ 0.16
RAPGEF3-205ENST00000449771 ISM2Q6H9L7 571 aa16.05■□□□□ 0.16
RAPGEF3-205ENST00000449771 NAA16Q6N069 864 aaPredicted RBP16.05■□□□□ 0.16
RAPGEF3-205ENST00000449771 VEZTQ9HBM0 779 aa16.05■□□□□ 0.16
RAPGEF3-205ENST00000449771 PRPF4BQ13523 1007 aaKnown RBP16.05■□□□□ 0.16
RAPGEF3-205ENST00000449771 SKAP1Q86WV1 359 aa16.05■□□□□ 0.16
RAPGEF3-205ENST00000449771 KLF18A0A0U1RQI7 1052 aa16.04■□□□□ 0.16
RAPGEF3-205ENST00000449771 POLD1P28340 1107 aa16.04■□□□□ 0.16
RAPGEF3-205ENST00000449771 TTC22Q5TAA0 569 aa16.04■□□□□ 0.16
RAPGEF3-205ENST00000449771 PLCD3Q8N3E9 789 aa16.04■□□□□ 0.16
RAPGEF3-205ENST00000449771 C16orf71Q8IYS4 520 aaPredicted RBP16.04■□□□□ 0.16
RAPGEF3-205ENST00000449771 PSMD1Q99460 953 aa16.04■□□□□ 0.16
RAPGEF3-205ENST00000449771 WWC3Q9ULE0 1092 aa16.04■□□□□ 0.16
RAPGEF3-205ENST00000449771 RBM25P49756 843 aaKnown RBP16.04■□□□□ 0.16
RAPGEF3-205ENST00000449771 TMC6Q7Z403 805 aa16.04■□□□□ 0.16
RAPGEF3-205ENST00000449771 ESR2Q92731 530 aa16.04■□□□□ 0.16
RAPGEF3-205ENST00000449771 PPIP5K1Q6PFW1 1433 aa16.04■□□□□ 0.16
RAPGEF3-205ENST00000449771 C11orf95C9JLR9 678 aaPredicted RBP16.04■□□□□ 0.16
RAPGEF3-205ENST00000449771 STAMBPO95630 424 aa16.04■□□□□ 0.16
RAPGEF3-205ENST00000449771 NOP2P46087 812 aaKnown RBP16.04■□□□□ 0.16
RAPGEF3-205ENST00000449771 RHPN1Q8TCX5 695 aa16.04■□□□□ 0.16
RAPGEF3-205ENST00000449771 TAOK3Q9H2K8 898 aa16.04■□□□□ 0.16
RAPGEF3-205ENST00000449771 PLS1Q14651 629 aa16.03■□□□□ 0.16
RAPGEF3-205ENST00000449771 DISP3Q9P2K9 1392 aa16.03■□□□□ 0.16
RAPGEF3-205ENST00000449771 KIF18AQ8NI77 898 aa16.03■□□□□ 0.16
RAPGEF3-205ENST00000449771 ZFYP08048 801 aaPredicted RBP16.03■□□□□ 0.16
RAPGEF3-205ENST00000449771 NF2P35240 595 aa16.03■□□□□ 0.16
RAPGEF3-205ENST00000449771 RBM26Q5T8P6 1007 aaKnown RBP16.03■□□□□ 0.16
RAPGEF3-205ENST00000449771 SIRT1Q96EB6 747 aa16.03■□□□□ 0.16
RAPGEF3-205ENST00000449771 CNNM2Q9H8M5 875 aa16.03■□□□□ 0.16
RAPGEF3-205ENST00000449771 TFCP2L1Q9NZI6 479 aa16.03■□□□□ 0.16
RAPGEF3-205ENST00000449771 NBPF7P0C2Y1 421 aaPredicted RBP16.03■□□□□ 0.16
RAPGEF3-205ENST00000449771 TRAF1Q13077 416 aa16.03■□□□□ 0.16
RAPGEF3-205ENST00000449771 AKAP4Q5JQC9 854 aa16.03■□□□□ 0.16
RAPGEF3-205ENST00000449771 GDPD2Q9HCC8 539 aa16.03■□□□□ 0.16
RAPGEF3-205ENST00000449771 DZIP3Q86Y13 1208 aaKnown RBP16.03■□□□□ 0.16
RAPGEF3-205ENST00000449771 FERMT1Q9BQL6 677 aa16.03■□□□□ 0.16
RAPGEF3-205ENST00000449771 ZBTB43O43298 467 aa16.02■□□□□ 0.16
RAPGEF3-205ENST00000449771 UBE4AQ14139 1066 aa16.02■□□□□ 0.16
RAPGEF3-205ENST00000449771 DYNC1I1O14576 645 aa16.02■□□□□ 0.16
RAPGEF3-205ENST00000449771 CCDC102BQ68D86 513 aa16.02■□□□□ 0.16
RAPGEF3-205ENST00000449771 SMARCC2Q8TAQ2 1214 aa16.02■□□□□ 0.16
RAPGEF3-205ENST00000449771 IPO4Q8TEX9 1081 aaKnown RBP16.02■□□□□ 0.16
RAPGEF3-205ENST00000449771 IL16Q14005 1332 aa16.02■□□□□ 0.16
RAPGEF3-205ENST00000449771 PABPN1LA6NDY0 278 aaKnown RBP16.02■□□□□ 0.16
RAPGEF3-205ENST00000449771 TRIM47Q96LD4 638 aa16.02■□□□□ 0.16
RAPGEF3-205ENST00000449771 SYNCQ9H7C4 482 aa16.02■□□□□ 0.16
RAPGEF3-205ENST00000449771 MAGEB6P1A0A0J9YX57 407 aa16.02■□□□□ 0.15
RAPGEF3-205ENST00000449771 GOLGA6L10A0A0M3HER8 536 aa16.02■□□□□ 0.15
RAPGEF3-205ENST00000449771 RTN1Q16799 776 aa16.02■□□□□ 0.15
RAPGEF3-205ENST00000449771 RMND1Q9NWS8 449 aa16.02■□□□□ 0.15
RAPGEF3-205ENST00000449771 TRMT1Q9NXH9 659 aaKnown RBP16.02■□□□□ 0.15
RAPGEF3-205ENST00000449771 SHTN1A0MZ66 631 aa16.01■□□□□ 0.15
RAPGEF3-205ENST00000449771 KDM5BQ9UGL1 1544 aa16.01■□□□□ 0.15
RAPGEF3-205ENST00000449771 IL2RBP14784 551 aa16.01■□□□□ 0.15
RAPGEF3-205ENST00000449771 LMAN1P49257 510 aa16.01■□□□□ 0.15
RAPGEF3-205ENST00000449771 RTCBQ9Y3I0 505 aaKnown RBP16.01■□□□□ 0.15
RAPGEF3-205ENST00000449771 INCENPQ9NQS7 918 aa16.01■□□□□ 0.15
RAPGEF3-205ENST00000449771 STAT6P42226 847 aa16.01■□□□□ 0.15
RAPGEF3-205ENST00000449771 LMBR1LQ6UX01 489 aa16.01■□□□□ 0.15
RAPGEF3-205ENST00000449771 CABLES1Q8TDN4 633 aa16.01■□□□□ 0.15
RAPGEF3-205ENST00000449771 TBC1D5Q92609 795 aa16.01■□□□□ 0.15
RAPGEF3-205ENST00000449771 TMTC2Q8N394 836 aa16.01■□□□□ 0.15
RAPGEF3-205ENST00000449771 NAA15Q9BXJ9 866 aaKnown RBP16.01■□□□□ 0.15
RAPGEF3-205ENST00000449771 TNPO1Q92973 898 aaKnown RBP16■□□□□ 0.15
RAPGEF3-205ENST00000449771 BRF1Q92994 677 aa16■□□□□ 0.15
RAPGEF3-205ENST00000449771 PHACTR2O75167 634 aa16■□□□□ 0.15
RAPGEF3-205ENST00000449771 NAPAP54920 295 aa16■□□□□ 0.15
RAPGEF3-205ENST00000449771 HLTFQ14527 1009 aaKnown RBP eCLIP16■□□□□ 0.15
RAPGEF3-205ENST00000449771 ZNF354CQ86Y25 554 aa16■□□□□ 0.15
RAPGEF3-205ENST00000449771 RRAGBQ5VZM2 374 aa16■□□□□ 0.15
RAPGEF3-205ENST00000449771 ALG1Q9BT22 464 aa16■□□□□ 0.15
RAPGEF3-205ENST00000449771 GRM8O00222 908 aa16■□□□□ 0.15
RAPGEF3-205ENST00000449771 ECM2O94769 699 aaPredicted RBP16■□□□□ 0.15
RAPGEF3-205ENST00000449771 NBPF14Q5TI25 921 aa16■□□□□ 0.15
RAPGEF3-205ENST00000449771 LRRC2Q9BYS8 371 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms