RNA–Protein interactions for RNA: ENST00000449704.5

TOP3B-211, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-211ENST00000449704 BRPF1P55201 1214 aaPredicted RBP19.89■□□□□ 0.77
TOP3B-211ENST00000449704 SLX4Q8IY92 1834 aa19.89■□□□□ 0.77
TOP3B-211ENST00000449704 RTKN2Q8IZC4 609 aa19.89■□□□□ 0.77
TOP3B-211ENST00000449704 LMNB1P20700 586 aa19.88■□□□□ 0.77
TOP3B-211ENST00000449704 CASP7P55210 303 aa19.88■□□□□ 0.77
TOP3B-211ENST00000449704 CTSWP56202 376 aa19.88■□□□□ 0.77
TOP3B-211ENST00000449704 CC2D2BQ6DHV5 1058 aa19.88■□□□□ 0.77
TOP3B-211ENST00000449704 SLC51AQ86UW1 340 aa19.88■□□□□ 0.77
TOP3B-211ENST00000449704 CELF1Q92879 486 aaKnown RBP19.88■□□□□ 0.77
TOP3B-211ENST00000449704 API5Q9BZZ5 524 aaKnown RBP19.88■□□□□ 0.77
TOP3B-211ENST00000449704 SEC31BQ9NQW1 1179 aa19.88■□□□□ 0.77
TOP3B-211ENST00000449704 ARFGEF1Q9Y6D6 1849 aa19.88■□□□□ 0.77
TOP3B-211ENST00000449704 KIF16BQ96L93 1317 aa19.87■□□□□ 0.77
TOP3B-211ENST00000449704 GRM8O00222 908 aa19.87■□□□□ 0.77
TOP3B-211ENST00000449704 PRELPP51888 382 aa19.87■□□□□ 0.77
TOP3B-211ENST00000449704 FRAT1Q92837 279 aaPredicted RBP19.87■□□□□ 0.77
TOP3B-211ENST00000449704 ATP6V0A2Q9Y487 856 aa19.87■□□□□ 0.77
TOP3B-211ENST00000449704 IPO8O15397 1037 aaKnown RBP19.86■□□□□ 0.77
TOP3B-211ENST00000449704 RPS8P62241 208 aaKnown RBP19.86■□□□□ 0.77
TOP3B-211ENST00000449704 FKBP4Q02790 459 aaKnown RBP eCLIP19.86■□□□□ 0.77
TOP3B-211ENST00000449704 IFFO2Q5TF58 517 aa19.86■□□□□ 0.77
TOP3B-211ENST00000449704 TTLL11Q8NHH1 800 aa19.86■□□□□ 0.77
TOP3B-211ENST00000449704 YTHDC1Q96MU7 727 aaKnown RBP19.86■□□□□ 0.77
TOP3B-211ENST00000449704 LTBP3Q9NS15 1303 aa19.85■□□□□ 0.77
TOP3B-211ENST00000449704 SP8Q8IXZ3 490 aa19.85■□□□□ 0.77
TOP3B-211ENST00000449704 PLA2G12BQ9BX93 195 aa19.85■□□□□ 0.77
TOP3B-211ENST00000449704 ZNF277Q9NRM2 450 aaPredicted RBP19.85■□□□□ 0.77
TOP3B-211ENST00000449704 TMC4Q7Z404 712 aa19.84■□□□□ 0.77
TOP3B-211ENST00000449704 ARHGAP45Q92619 1136 aa19.84■□□□□ 0.77
TOP3B-211ENST00000449704 GREM2Q9H772 168 aa19.84■□□□□ 0.77
TOP3B-211ENST00000449704 CCT4P50991 539 aaKnown RBP19.83■□□□□ 0.77
TOP3B-211ENST00000449704 GRIPAP1Q4V328 841 aa19.83■□□□□ 0.77
TOP3B-211ENST00000449704 ANKRD18AQ8IVF6 992 aa19.83■□□□□ 0.77
TOP3B-211ENST00000449704 ZNF526Q8TF50 670 aaPredicted RBP19.83■□□□□ 0.77
TOP3B-211ENST00000449704 CHMP3Q9Y3E7 222 aa19.83■□□□□ 0.77
TOP3B-211ENST00000449704 DDX60Q8IY21 1712 aaKnown RBP19.82■□□□□ 0.76
TOP3B-211ENST00000449704 NBPF7P0C2Y1 421 aaPredicted RBP19.82■□□□□ 0.76
TOP3B-211ENST00000449704 CDC5LQ99459 802 aaKnown RBP19.82■□□□□ 0.76
TOP3B-211ENST00000449704 PSMD1Q99460 953 aa19.82■□□□□ 0.76
TOP3B-211ENST00000449704 CSF1RP07333 972 aa19.81■□□□□ 0.76
TOP3B-211ENST00000449704 FOXO4P98177 505 aa19.81■□□□□ 0.76
TOP3B-211ENST00000449704 FAM161AQ3B820 660 aa19.81■□□□□ 0.76
TOP3B-211ENST00000449704 EPHA10Q5JZY3 1008 aa19.81■□□□□ 0.76
TOP3B-211ENST00000449704 DPP8Q6V1X1 898 aaPredicted RBP19.81■□□□□ 0.76
TOP3B-211ENST00000449704 MPNDQ8N594 471 aa19.81■□□□□ 0.76
TOP3B-211ENST00000449704 SUCLG2Q96I99 432 aa19.81■□□□□ 0.76
TOP3B-211ENST00000449704 ITGA6P23229 1130 aa19.8■□□□□ 0.76
TOP3B-211ENST00000449704 ZKSCAN2Q63HK3 967 aa19.8■□□□□ 0.76
TOP3B-211ENST00000449704 LMBR1LQ6UX01 489 aa19.8■□□□□ 0.76
TOP3B-211ENST00000449704 ATF7IPQ6VMQ6 1270 aa19.8■□□□□ 0.76
TOP3B-211ENST00000449704 CLUAP1Q96AJ1 413 aa19.8■□□□□ 0.76
TOP3B-211ENST00000449704 USP44Q9H0E7 712 aa19.8■□□□□ 0.76
TOP3B-211ENST00000449704 TNNQ9UQP3 1299 aa19.8■□□□□ 0.76
TOP3B-211ENST00000449704 TRIM27P14373 513 aa19.79■□□□□ 0.76
TOP3B-211ENST00000449704 IARSP41252 1262 aaKnown RBP19.79■□□□□ 0.76
TOP3B-211ENST00000449704 NSFL1CQ9UNZ2 370 aaKnown RBP19.79■□□□□ 0.76
TOP3B-211ENST00000449704 LAMB2P55268 1798 aa19.79■□□□□ 0.76
TOP3B-211ENST00000449704 CACNA1SQ13698 1873 aa19.79■□□□□ 0.76
TOP3B-211ENST00000449704 UTYO14607 1347 aa19.78■□□□□ 0.76
TOP3B-211ENST00000449704 ANKRD18BA2A2Z9 1011 aa19.78■□□□□ 0.76
TOP3B-211ENST00000449704 IGHMBP2P38935 993 aaKnown RBP19.78■□□□□ 0.76
TOP3B-211ENST00000449704 SUPT20HQ8NEM7 779 aa19.78■□□□□ 0.76
TOP3B-211ENST00000449704 RTL9Q8NET4 1388 aa19.78■□□□□ 0.76
TOP3B-211ENST00000449704 SNED1Q8TER0 1413 aa19.77■□□□□ 0.76
TOP3B-211ENST00000449704 GPSM2P81274 684 aa19.77■□□□□ 0.76
TOP3B-211ENST00000449704 IFIT5Q13325 482 aaKnown RBP19.77■□□□□ 0.76
TOP3B-211ENST00000449704 LARGE2Q8N3Y3 721 aa19.77■□□□□ 0.76
TOP3B-211ENST00000449704 KAZALD1Q96I82 304 aa19.77■□□□□ 0.76
TOP3B-211ENST00000449704 GPBP1L1Q9HC44 474 aaPredicted RBP19.77■□□□□ 0.76
TOP3B-211ENST00000449704 C6orf229H3BNL8 230 aa19.76■□□□□ 0.75
TOP3B-211ENST00000449704 PPIP5K2O43314 1243 aa19.76■□□□□ 0.75
TOP3B-211ENST00000449704 CCDC57Q2TAC2 916 aa19.76■□□□□ 0.75
TOP3B-211ENST00000449704 INTS3Q68E01 1043 aaKnown RBP19.76■□□□□ 0.75
TOP3B-211ENST00000449704 MPHOSPH8Q99549 860 aa19.76■□□□□ 0.75
TOP3B-211ENST00000449704 RTFDC1Q9BY42 306 aaPredicted RBP19.76■□□□□ 0.75
TOP3B-211ENST00000449704 BICC1Q9H694 974 aaKnown RBP19.76■□□□□ 0.75
TOP3B-211ENST00000449704 BSDC1Q9NW68 430 aaPredicted RBP19.76■□□□□ 0.75
TOP3B-211ENST00000449704 ANKIB1Q9P2G1 1089 aa19.76■□□□□ 0.75
TOP3B-211ENST00000449704 ZC3H4Q9UPT8 1303 aaKnown RBP19.76■□□□□ 0.75
TOP3B-211ENST00000449704 UBTFL1P0CB47 393 aaPredicted RBP19.75■□□□□ 0.75
TOP3B-211ENST00000449704 TAF7LQ5H9L4 462 aa19.75■□□□□ 0.75
TOP3B-211ENST00000449704 JDP2Q8WYK2 163 aa19.75■□□□□ 0.75
TOP3B-211ENST00000449704 RCAN3Q9UKA8 241 aa19.75■□□□□ 0.75
TOP3B-211ENST00000449704 COL4A1P02462 1669 aa19.75■□□□□ 0.75
TOP3B-211ENST00000449704 FER1L6Q2WGJ9 1857 aa19.74■□□□□ 0.75
TOP3B-211ENST00000449704 AOC3Q16853 763 aa19.74■□□□□ 0.75
TOP3B-211ENST00000449704 FTSJ3Q8IY81 847 aaKnown RBP19.74■□□□□ 0.75
TOP3B-211ENST00000449704 TAF1P21675 1872 aa19.73■□□□□ 0.75
TOP3B-211ENST00000449704 GLTPD2A6NH11 291 aa19.73■□□□□ 0.75
TOP3B-211ENST00000449704 DPY19L2Q6NUT2 758 aa19.73■□□□□ 0.75
TOP3B-211ENST00000449704 ANKRD44Q8N8A2 993 aa19.73■□□□□ 0.75
TOP3B-211ENST00000449704 POLLQ9UGP5 575 aa19.73■□□□□ 0.75
TOP3B-211ENST00000449704 GGA1Q9UJY5 639 aa19.73■□□□□ 0.75
TOP3B-211ENST00000449704 MINPP1Q9UNW1 487 aa19.73■□□□□ 0.75
TOP3B-211ENST00000449704 KDM2BQ8NHM5 1336 aa19.73■□□□□ 0.75
TOP3B-211ENST00000449704 UFL1O94874 794 aa19.72■□□□□ 0.75
TOP3B-211ENST00000449704 NIM1KQ8IY84 436 aa19.72■□□□□ 0.75
TOP3B-211ENST00000449704 DZIP1LQ8IYY4 767 aaKnown RBP19.72■□□□□ 0.75
TOP3B-211ENST00000449704 TMEM57Q8N5G2 664 aa19.72■□□□□ 0.75
TOP3B-211ENST00000449704 TBC1D16Q8TBP0 767 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms