RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 GRM8O00222 908 aa12.4□□□□□ -0.42
CCDC171-203ENST00000449575 EPHA10Q5JZY3 1008 aa12.4□□□□□ -0.42
CCDC171-203ENST00000449575 SLC10A5Q5PT55 438 aa12.4□□□□□ -0.42
CCDC171-203ENST00000449575 KAZALD1Q96I82 304 aa12.4□□□□□ -0.42
CCDC171-203ENST00000449575 MEIS3Q99687 375 aa12.4□□□□□ -0.42
CCDC171-203ENST00000449575 C9orf78Q9NZ63 289 aaPredicted RBP12.4□□□□□ -0.43
CCDC171-203ENST00000449575 RRP1P56182 461 aaKnown RBP12.39□□□□□ -0.43
CCDC171-203ENST00000449575 C2CD5Q86YS7 1000 aa12.39□□□□□ -0.43
CCDC171-203ENST00000449575 FTSJ3Q8IY81 847 aaKnown RBP12.39□□□□□ -0.43
CCDC171-203ENST00000449575 ZBTB47Q9UFB7 747 aaPredicted RBP12.39□□□□□ -0.43
CCDC171-203ENST00000449575 SRGNP10124 158 aa12.39□□□□□ -0.43
CCDC171-203ENST00000449575 CCT4P50991 539 aaKnown RBP12.39□□□□□ -0.43
CCDC171-203ENST00000449575 SUCLG2Q96I99 432 aa12.39□□□□□ -0.43
CCDC171-203ENST00000449575 COG6Q9Y2V7 657 aa12.39□□□□□ -0.43
CCDC171-203ENST00000449575 KLRG2A4D1S0 409 aaPredicted RBP12.38□□□□□ -0.43
CCDC171-203ENST00000449575 UTYO14607 1347 aa12.38□□□□□ -0.43
CCDC171-203ENST00000449575 CDHR2Q9BYE9 1310 aa12.38□□□□□ -0.43
CCDC171-203ENST00000449575 CRY2Q49AN0 593 aa12.38□□□□□ -0.43
CCDC171-203ENST00000449575 ITPRIPQ8IWB1 547 aa12.38□□□□□ -0.43
CCDC171-203ENST00000449575 NLRP3Q96P20 1036 aa12.38□□□□□ -0.43
CCDC171-203ENST00000449575 RIC1Q4ADV7 1423 aa12.37□□□□□ -0.43
CCDC171-203ENST00000449575 RNF123Q5XPI4 1314 aa12.37□□□□□ -0.43
CCDC171-203ENST00000449575 PDE6BP35913 854 aa12.37□□□□□ -0.43
CCDC171-203ENST00000449575 TGFB2P61812 414 aa12.37□□□□□ -0.43
CCDC171-203ENST00000449575 FOXO4P98177 505 aa12.37□□□□□ -0.43
CCDC171-203ENST00000449575 H0YIN7 160 aa12.37□□□□□ -0.43
CCDC171-203ENST00000449575 ZNF622Q969S3 477 aaKnown RBP eCLIP12.37□□□□□ -0.43
CCDC171-203ENST00000449575 SEC31BQ9NQW1 1179 aa12.37□□□□□ -0.43
CCDC171-203ENST00000449575 PDE8AO60658 829 aa12.36□□□□□ -0.43
CCDC171-203ENST00000449575 OLFM4Q6UX06 510 aa12.36□□□□□ -0.43
CCDC171-203ENST00000449575 TTLL11Q8NHH1 800 aa12.36□□□□□ -0.43
CCDC171-203ENST00000449575 ARFGEF1Q9Y6D6 1849 aa12.36□□□□□ -0.43
CCDC171-203ENST00000449575 BICC1Q9H694 974 aaKnown RBP12.36□□□□□ -0.43
CCDC171-203ENST00000449575 GREM2Q9H772 168 aa12.36□□□□□ -0.43
CCDC171-203ENST00000449575 C1orf115Q9H7X2 142 aa12.36□□□□□ -0.43
CCDC171-203ENST00000449575 ZBTB7BO15156 539 aaPredicted RBP12.35□□□□□ -0.43
CCDC171-203ENST00000449575 CTSWP56202 376 aa12.35□□□□□ -0.43
CCDC171-203ENST00000449575 YBX3P16989 372 aaKnown RBP eCLIP12.35□□□□□ -0.43
CCDC171-203ENST00000449575 MVPQ14764 893 aaKnown RBP12.35□□□□□ -0.43
CCDC171-203ENST00000449575 SF3B3Q15393 1217 aaKnown RBP12.35□□□□□ -0.43
CCDC171-203ENST00000449575 FAM161AQ3B820 660 aa12.35□□□□□ -0.43
CCDC171-203ENST00000449575 ANKRD44Q8N8A2 993 aa12.35□□□□□ -0.43
CCDC171-203ENST00000449575 ZNF219Q9P2Y4 722 aaPredicted RBP12.35□□□□□ -0.43
CCDC171-203ENST00000449575 LRRFIP2Q9Y608 721 aaKnown RBP12.35□□□□□ -0.43
CCDC171-203ENST00000449575 LMBR1LQ6UX01 489 aa12.34□□□□□ -0.43
CCDC171-203ENST00000449575 CELF1Q92879 486 aaKnown RBP12.34□□□□□ -0.43
CCDC171-203ENST00000449575 MASTLQ96GX5 879 aa12.34□□□□□ -0.43
CCDC171-203ENST00000449575 PLA2G12BQ9BX93 195 aa12.34□□□□□ -0.43
CCDC171-203ENST00000449575 CCDC88AQ3V6T2 1871 aa12.34□□□□□ -0.43
CCDC171-203ENST00000449575 UBTFL1P0CB47 393 aaPredicted RBP12.34□□□□□ -0.43
CCDC171-203ENST00000449575 PDE3AQ14432 1141 aa12.34□□□□□ -0.43
CCDC171-203ENST00000449575 B4GALNT3Q6L9W6 998 aa12.34□□□□□ -0.43
CCDC171-203ENST00000449575 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.34□□□□□ -0.43
CCDC171-203ENST00000449575 RPGRQ92834 1020 aaKnown RBP12.34□□□□□ -0.43
CCDC171-203ENST00000449575 BCS1LQ9Y276 419 aa12.34□□□□□ -0.43
CCDC171-203ENST00000449575 CSF1RP07333 972 aa12.33□□□□□ -0.44
CCDC171-203ENST00000449575 NPR1P16066 1061 aa12.33□□□□□ -0.44
CCDC171-203ENST00000449575 PIM2Q9P1W9 311 aa12.33□□□□□ -0.44
CCDC171-203ENST00000449575 HOXA10P31260 410 aaPredicted RBP12.33□□□□□ -0.44
CCDC171-203ENST00000449575 PRPF40BQ6NWY9 871 aaKnown RBP12.33□□□□□ -0.44
CCDC171-203ENST00000449575 CHMP3Q9Y3E7 222 aa12.33□□□□□ -0.44
CCDC171-203ENST00000449575 CRBNQ96SW2 442 aa12.32□□□□□ -0.44
CCDC171-203ENST00000449575 STYK1Q6J9G0 422 aa12.32□□□□□ -0.44
CCDC171-203ENST00000449575 TTLL6Q8N841 843 aa12.32□□□□□ -0.44
CCDC171-203ENST00000449575 IL27Q8NEV9 243 aa12.32□□□□□ -0.44
CCDC171-203ENST00000449575 KLHDC4Q8TBB5 520 aa12.32□□□□□ -0.44
CCDC171-203ENST00000449575 ZNF594Q96JF6 807 aaPredicted RBP12.32□□□□□ -0.44
CCDC171-203ENST00000449575 CCDC136Q96JN2 1154 aa12.32□□□□□ -0.44
CCDC171-203ENST00000449575 FER1L6Q2WGJ9 1857 aa12.32□□□□□ -0.44
CCDC171-203ENST00000449575 ITGA6P23229 1130 aa12.31□□□□□ -0.44
CCDC171-203ENST00000449575 RABL6Q3YEC7 729 aaPredicted RBP12.31□□□□□ -0.44
CCDC171-203ENST00000449575 CCDC152Q4G0S7 254 aa12.31□□□□□ -0.44
CCDC171-203ENST00000449575 A0A1B0GUL6 1792 aa12.31□□□□□ -0.44
CCDC171-203ENST00000449575 C21orf2O43822 256 aa12.31□□□□□ -0.44
CCDC171-203ENST00000449575 DDX46Q7L014 1031 aaKnown RBP12.31□□□□□ -0.44
CCDC171-203ENST00000449575 RBM17Q96I25 401 aaKnown RBP12.31□□□□□ -0.44
CCDC171-203ENST00000449575 LRRC37AA6NMS7 1700 aa12.3□□□□□ -0.44
CCDC171-203ENST00000449575 SBF1O95248 1867 aa12.3□□□□□ -0.44
CCDC171-203ENST00000449575 GNAI3P08754 354 aa12.3□□□□□ -0.44
CCDC171-203ENST00000449575 MS4A1P11836 297 aa12.3□□□□□ -0.44
CCDC171-203ENST00000449575 DALRD3Q5D0E6 543 aaKnown RBP12.3□□□□□ -0.44
CCDC171-203ENST00000449575 C7orf43Q8WVR3 580 aa12.3□□□□□ -0.44
CCDC171-203ENST00000449575 CRAMP1Q96RY5 1269 aa12.3□□□□□ -0.44
CCDC171-203ENST00000449575 ZBTB40Q9NUA8 1239 aa12.3□□□□□ -0.44
CCDC171-203ENST00000449575 GRAPQ13588 217 aa12.3□□□□□ -0.44
CCDC171-203ENST00000449575 GRAPLQ8TC17 118 aaPredicted RBP12.3□□□□□ -0.44
CCDC171-203ENST00000449575 CNKSR1Q969H4 720 aa12.3□□□□□ -0.44
CCDC171-203ENST00000449575 PNMA6EA0A0J9YXQ4 647 aa12.29□□□□□ -0.44
CCDC171-203ENST00000449575 DDX19BQ9UMR2 479 aa12.29□□□□□ -0.44
CCDC171-203ENST00000449575 WTIPA6NIX2 430 aaPredicted RBP12.29□□□□□ -0.44
CCDC171-203ENST00000449575 GNAI2P04899 355 aa12.29□□□□□ -0.44
CCDC171-203ENST00000449575 ALDH1B1P30837 517 aa12.29□□□□□ -0.44
CCDC171-203ENST00000449575 PDZRN3Q9UPQ7 1066 aa12.29□□□□□ -0.44
CCDC171-203ENST00000449575 HSP90B1P14625 803 aaKnown RBP12.28□□□□□ -0.44
CCDC171-203ENST00000449575 RPS8P62241 208 aaKnown RBP12.28□□□□□ -0.44
CCDC171-203ENST00000449575 GPR162Q16538 588 aa12.28□□□□□ -0.44
CCDC171-203ENST00000449575 TPRNQ4KMQ1 711 aa12.28□□□□□ -0.44
CCDC171-203ENST00000449575 PUS3Q9BZE2 481 aaKnown RBP12.28□□□□□ -0.44
CCDC171-203ENST00000449575 RTL9Q8NET4 1388 aa12.28□□□□□ -0.44
CCDC171-203ENST00000449575 PPEF1O14829 653 aaPredicted RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms