RNA–Protein interactions for RNA: ENST00000449415.5

RFTN1-205, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 3

Gene RFTN1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-205ENST00000449415 COL4A1P02462 1669 aa22.92■■□□□ 1.26
RFTN1-205ENST00000449415 MYH3P11055 1940 aa22.91■■□□□ 1.26
RFTN1-205ENST00000449415 BBOX1O75936 387 aa22.91■■□□□ 1.26
RFTN1-205ENST00000449415 CELF1Q92879 486 aaKnown RBP22.91■■□□□ 1.26
RFTN1-205ENST00000449415 RRAGCQ9HB90 399 aa22.91■■□□□ 1.26
RFTN1-205ENST00000449415 GLTPD2A6NH11 291 aa22.9■■□□□ 1.26
RFTN1-205ENST00000449415 PDE8AO60658 829 aa22.9■■□□□ 1.26
RFTN1-205ENST00000449415 IARSP41252 1262 aaKnown RBP22.9■■□□□ 1.26
RFTN1-205ENST00000449415 PSMD1Q99460 953 aa22.9■■□□□ 1.26
RFTN1-205ENST00000449415 HSP90B1P14625 803 aaKnown RBP22.89■■□□□ 1.25
RFTN1-205ENST00000449415 UBE3BQ7Z3V4 1068 aa22.89■■□□□ 1.25
RFTN1-205ENST00000449415 SP8Q8IXZ3 490 aa22.89■■□□□ 1.25
RFTN1-205ENST00000449415 SEC31BQ9NQW1 1179 aa22.89■■□□□ 1.25
RFTN1-205ENST00000449415 CDHR2Q9BYE9 1310 aa22.88■■□□□ 1.25
RFTN1-205ENST00000449415 GCKRQ14397 625 aa22.88■■□□□ 1.25
RFTN1-205ENST00000449415 DPY19L2Q6NUT2 758 aa22.88■■□□□ 1.25
RFTN1-205ENST00000449415 LINS1Q8NG48 757 aa22.88■■□□□ 1.25
RFTN1-205ENST00000449415 GRIPAP1Q4V328 841 aa22.87■■□□□ 1.25
RFTN1-205ENST00000449415 TRMT2AQ8IZ69 625 aaKnown RBP22.87■■□□□ 1.25
RFTN1-205ENST00000449415 MRPL50Q8N5N7 158 aaKnown RBP22.87■■□□□ 1.25
RFTN1-205ENST00000449415 BCL2L13Q9BXK5 485 aa22.87■■□□□ 1.25
RFTN1-205ENST00000449415 H7C1W4 665 aa22.86■■□□□ 1.25
RFTN1-205ENST00000449415 CCDC152Q4G0S7 254 aa22.86■■□□□ 1.25
RFTN1-205ENST00000449415 SLC4A10Q6U841 1118 aa22.86■■□□□ 1.25
RFTN1-205ENST00000449415 DPP8Q6V1X1 898 aaPredicted RBP22.86■■□□□ 1.25
RFTN1-205ENST00000449415 MPNDQ8N594 471 aa22.86■■□□□ 1.25
RFTN1-205ENST00000449415 SSH1Q8WYL5 1049 aa22.86■■□□□ 1.25
RFTN1-205ENST00000449415 LRRC37AA6NMS7 1700 aa22.85■■□□□ 1.25
RFTN1-205ENST00000449415 SPEF2Q9C093 1822 aa22.85■■□□□ 1.25
RFTN1-205ENST00000449415 COL4A5P29400 1685 aa22.85■■□□□ 1.25
RFTN1-205ENST00000449415 DDNO94850 711 aaPredicted RBP22.85■■□□□ 1.25
RFTN1-205ENST00000449415 CTSWP56202 376 aa22.85■■□□□ 1.25
RFTN1-205ENST00000449415 HNRNPUQ00839 825 aaKnown RBP eCLIP22.85■■□□□ 1.25
RFTN1-205ENST00000449415 LARGE2Q8N3Y3 721 aa22.85■■□□□ 1.25
RFTN1-205ENST00000449415 RPS8P62241 208 aaKnown RBP22.84■■□□□ 1.25
RFTN1-205ENST00000449415 BEND3Q5T5X7 828 aa22.84■■□□□ 1.25
RFTN1-205ENST00000449415 TMC4Q7Z404 712 aa22.84■■□□□ 1.25
RFTN1-205ENST00000449415 C16orf71Q8IYS4 520 aaPredicted RBP22.84■■□□□ 1.25
RFTN1-205ENST00000449415 JDP2Q8WYK2 163 aa22.84■■□□□ 1.25
RFTN1-205ENST00000449415 ZNF541Q9H0D2 1346 aa22.83■■□□□ 1.25
RFTN1-205ENST00000449415 WDR90Q96KV7 1748 aa22.83■■□□□ 1.25
RFTN1-205ENST00000449415 PPIP5K2O43314 1243 aa22.83■■□□□ 1.25
RFTN1-205ENST00000449415 AOC3Q16853 763 aa22.83■■□□□ 1.25
RFTN1-205ENST00000449415 SUPT20HQ8NEM7 779 aa22.82■■□□□ 1.24
RFTN1-205ENST00000449415 TTLL11Q8NHH1 800 aa22.82■■□□□ 1.24
RFTN1-205ENST00000449415 VEGFAP15692 232 aaPredicted RBP22.81■■□□□ 1.24
RFTN1-205ENST00000449415 CASP7P55210 303 aa22.81■■□□□ 1.24
RFTN1-205ENST00000449415 SMC4Q9NTJ3 1288 aa22.81■■□□□ 1.24
RFTN1-205ENST00000449415 NSFL1CQ9UNZ2 370 aaKnown RBP22.81■■□□□ 1.24
RFTN1-205ENST00000449415 POTECB2RU33 542 aa22.8■■□□□ 1.24
RFTN1-205ENST00000449415 TOMM70O94826 608 aa22.8■■□□□ 1.24
RFTN1-205ENST00000449415 GPSM2P81274 684 aa22.8■■□□□ 1.24
RFTN1-205ENST00000449415 RTFDC1Q9BY42 306 aaPredicted RBP22.8■■□□□ 1.24
RFTN1-205ENST00000449415 GREM2Q9H772 168 aa22.8■■□□□ 1.24
RFTN1-205ENST00000449415 DUOX1Q9NRD9 1551 aa22.8■■□□□ 1.24
RFTN1-205ENST00000449415 FZD9O00144 591 aa22.79■■□□□ 1.24
RFTN1-205ENST00000449415 ALDH1L2Q3SY69 923 aa22.79■■□□□ 1.24
RFTN1-205ENST00000449415 ANKRD18AQ8IVF6 992 aa22.79■■□□□ 1.24
RFTN1-205ENST00000449415 NIM1KQ8IY84 436 aa22.79■■□□□ 1.24
RFTN1-205ENST00000449415 SRCIN1Q9C0H9 1055 aa22.79■■□□□ 1.24
RFTN1-205ENST00000449415 EIF6P56537 245 aaKnown RBP22.78■■□□□ 1.24
RFTN1-205ENST00000449415 C6orf229H3BNL8 230 aa22.77■■□□□ 1.24
RFTN1-205ENST00000449415 CDC5LQ99459 802 aaKnown RBP22.77■■□□□ 1.24
RFTN1-205ENST00000449415 PLA2G12BQ9BX93 195 aa22.77■■□□□ 1.24
RFTN1-205ENST00000449415 C9orf78Q9NZ63 289 aaPredicted RBP22.77■■□□□ 1.24
RFTN1-205ENST00000449415 GJA3Q9Y6H8 435 aa22.77■■□□□ 1.24
RFTN1-205ENST00000449415 PTPRCP08575 1304 aa22.77■■□□□ 1.24
RFTN1-205ENST00000449415 GRM8O00222 908 aa22.76■■□□□ 1.23
RFTN1-205ENST00000449415 ALDH1L1O75891 902 aa22.76■■□□□ 1.23
RFTN1-205ENST00000449415 FAM161AQ3B820 660 aa22.76■■□□□ 1.23
RFTN1-205ENST00000449415 GPR101Q96P66 508 aaPredicted RBP22.76■■□□□ 1.23
RFTN1-205ENST00000449415 POLLQ9UGP5 575 aa22.76■■□□□ 1.23
RFTN1-205ENST00000449415 LTBP1Q14766 1721 aa22.76■■□□□ 1.23
RFTN1-205ENST00000449415 RIMBP2O15034 1052 aa22.75■■□□□ 1.23
RFTN1-205ENST00000449415 CT47B1P0C2W7 299 aaPredicted RBP22.75■■□□□ 1.23
RFTN1-205ENST00000449415 KIAA2012Q0VF49 1180 aa22.75■■□□□ 1.23
RFTN1-205ENST00000449415 RBM46Q8TBY0 533 aaKnown RBP22.75■■□□□ 1.23
RFTN1-205ENST00000449415 VPS33BQ9H267 617 aa22.75■■□□□ 1.23
RFTN1-205ENST00000449415 ANKIB1Q9P2G1 1089 aa22.75■■□□□ 1.23
RFTN1-205ENST00000449415 SCN4AP35499 1836 aa22.75■■□□□ 1.23
RFTN1-205ENST00000449415 ITGA6P23229 1130 aa22.74■■□□□ 1.23
RFTN1-205ENST00000449415 CHMP3Q9Y3E7 222 aa22.74■■□□□ 1.23
RFTN1-205ENST00000449415 RTL9Q8NET4 1388 aa22.74■■□□□ 1.23
RFTN1-205ENST00000449415 CSF1RP07333 972 aa22.73■■□□□ 1.23
RFTN1-205ENST00000449415 FOXO4P98177 505 aa22.73■■□□□ 1.23
RFTN1-205ENST00000449415 WASHC4Q2M389 1173 aa22.73■■□□□ 1.23
RFTN1-205ENST00000449415 EPHA10Q5JZY3 1008 aa22.73■■□□□ 1.23
RFTN1-205ENST00000449415 GPC2Q8N158 579 aa22.73■■□□□ 1.23
RFTN1-205ENST00000449415 TBC1D16Q8TBP0 767 aa22.73■■□□□ 1.23
RFTN1-205ENST00000449415 NOB1Q9ULX3 412 aaKnown RBP22.73■■□□□ 1.23
RFTN1-205ENST00000449415 UFL1O94874 794 aa22.72■■□□□ 1.23
RFTN1-205ENST00000449415 L3MBTL3Q96JM7 780 aaPredicted RBP22.72■■□□□ 1.23
RFTN1-205ENST00000449415 ZNRF3Q9ULT6 936 aa22.72■■□□□ 1.23
RFTN1-205ENST00000449415 IQCA1LA6NCM1 817 aa22.71■■□□□ 1.23
RFTN1-205ENST00000449415 IGHMBP2P38935 993 aaKnown RBP22.71■■□□□ 1.23
RFTN1-205ENST00000449415 RARSP54136 660 aaKnown RBP22.71■■□□□ 1.23
RFTN1-205ENST00000449415 EYA3Q99504 573 aa22.71■■□□□ 1.23
RFTN1-205ENST00000449415 GGA1Q9UJY5 639 aa22.71■■□□□ 1.23
RFTN1-205ENST00000449415 NBPF7P0C2Y1 421 aaPredicted RBP22.7■■□□□ 1.22
RFTN1-205ENST00000449415 DOK7Q18PE1 504 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms