RNA–Protein interactions for RNA: ENST00000449193.6

SKIDA1-202, Transcript of SKI/DACH domain containing 1, humanhuman

APPRIS P2 TSL 3 BASIC

Gene SKIDA1, Length 6,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIDA1-202ENST00000449193 EXOC1Q9NV70 894 aa20.35■□□□□ 0.85
SKIDA1-202ENST00000449193 BMP2KLQ5H9B9 411 aa20.35■□□□□ 0.85
SKIDA1-202ENST00000449193 C20orf194Q5TEA3 1177 aa20.35■□□□□ 0.85
SKIDA1-202ENST00000449193 COPS6Q7L5N1 327 aa20.35■□□□□ 0.85
SKIDA1-202ENST00000449193 F8W031 263 aaPredicted RBP20.34■□□□□ 0.85
SKIDA1-202ENST00000449193 ALDH1L1O75891 902 aa20.34■□□□□ 0.85
SKIDA1-202ENST00000449193 ANXA1P04083 346 aa20.34■□□□□ 0.85
SKIDA1-202ENST00000449193 TEX14Q8IWB6 1497 aa20.34■□□□□ 0.85
SKIDA1-202ENST00000449193 TMCO5BA8MYB1 307 aa20.34■□□□□ 0.85
SKIDA1-202ENST00000449193 NEMFO60524 1076 aa20.34■□□□□ 0.85
SKIDA1-202ENST00000449193 TNNT1P13805 278 aa20.34■□□□□ 0.85
SKIDA1-202ENST00000449193 GSDMDP57764 484 aa20.34■□□□□ 0.85
SKIDA1-202ENST00000449193 NBPF14Q5TI25 921 aa20.34■□□□□ 0.85
SKIDA1-202ENST00000449193 PDCL2Q8N4E4 241 aa20.34■□□□□ 0.85
SKIDA1-202ENST00000449193 UHRF1BP1LA0JNW5 1464 aa20.33■□□□□ 0.85
SKIDA1-202ENST00000449193 ZBTB43O43298 467 aa20.33■□□□□ 0.85
SKIDA1-202ENST00000449193 IL15P40933 162 aaPredicted RBP20.33■□□□□ 0.85
SKIDA1-202ENST00000449193 PARP3Q9Y6F1 533 aa20.33■□□□□ 0.85
SKIDA1-202ENST00000449193 ESPNB1AK53 854 aa20.33■□□□□ 0.85
SKIDA1-202ENST00000449193 TTC22Q5TAA0 569 aa20.33■□□□□ 0.85
SKIDA1-202ENST00000449193 VTI1AQ96AJ9 217 aa20.33■□□□□ 0.85
SKIDA1-202ENST00000449193 LARP6Q9BRS8 491 aaKnown RBP20.33■□□□□ 0.85
SKIDA1-202ENST00000449193 ZSCAN16Q9H4T2 348 aaPredicted RBP20.33■□□□□ 0.85
SKIDA1-202ENST00000449193 TFIP11Q9UBB9 837 aaKnown RBP20.33■□□□□ 0.85
SKIDA1-202ENST00000449193 TPTE2Q6XPS3 522 aa20.33■□□□□ 0.84
SKIDA1-202ENST00000449193 KLF18A0A0U1RQI7 1052 aa20.33■□□□□ 0.84
SKIDA1-202ENST00000449193 KDM5BQ9UGL1 1544 aa20.33■□□□□ 0.84
SKIDA1-202ENST00000449193 PABPN1LA6NDY0 278 aaKnown RBP20.32■□□□□ 0.84
SKIDA1-202ENST00000449193 TBC1D9Q6ZT07 1266 aa20.32■□□□□ 0.84
SKIDA1-202ENST00000449193 PANK2Q9BZ23 570 aa20.32■□□□□ 0.84
SKIDA1-202ENST00000449193 IL2RBP14784 551 aa20.32■□□□□ 0.84
SKIDA1-202ENST00000449193 RBM25P49756 843 aaKnown RBP20.32■□□□□ 0.84
SKIDA1-202ENST00000449193 ARHGAP45Q92619 1136 aa20.32■□□□□ 0.84
SKIDA1-202ENST00000449193 GOLGA6L10A0A0M3HER8 536 aa20.32■□□□□ 0.84
SKIDA1-202ENST00000449193 BIN1O00499 593 aa20.32■□□□□ 0.84
SKIDA1-202ENST00000449193 PICALMQ13492 652 aa20.32■□□□□ 0.84
SKIDA1-202ENST00000449193 RAB11FIP4Q86YS3 637 aa20.32■□□□□ 0.84
SKIDA1-202ENST00000449193 RTCBQ9Y3I0 505 aaKnown RBP20.32■□□□□ 0.84
SKIDA1-202ENST00000449193 ACTN2P35609 894 aa20.31■□□□□ 0.84
SKIDA1-202ENST00000449193 ZSCAN30Q86W11 494 aa20.31■□□□□ 0.84
SKIDA1-202ENST00000449193 NOP2P46087 812 aaKnown RBP20.31■□□□□ 0.84
SKIDA1-202ENST00000449193 ZC3H12CQ9C0D7 883 aaKnown RBP20.31■□□□□ 0.84
SKIDA1-202ENST00000449193 SHTN1A0MZ66 631 aa20.31■□□□□ 0.84
SKIDA1-202ENST00000449193 GRM8O00222 908 aa20.31■□□□□ 0.84
SKIDA1-202ENST00000449193 SMC1AQ14683 1233 aaKnown RBP20.31■□□□□ 0.84
SKIDA1-202ENST00000449193 RTN1Q16799 776 aa20.31■□□□□ 0.84
SKIDA1-202ENST00000449193 PLCG2P16885 1265 aa20.31■□□□□ 0.84
SKIDA1-202ENST00000449193 JDP2Q8WYK2 163 aa20.31■□□□□ 0.84
SKIDA1-202ENST00000449193 IFI16Q16666 785 aaKnown RBP20.3■□□□□ 0.84
SKIDA1-202ENST00000449193 KSR2Q6VAB6 950 aa20.3■□□□□ 0.84
SKIDA1-202ENST00000449193 SMARCC2Q8TAQ2 1214 aa20.3■□□□□ 0.84
SKIDA1-202ENST00000449193 TBC1D5Q92609 795 aa20.3■□□□□ 0.84
SKIDA1-202ENST00000449193 TRIM47Q96LD4 638 aa20.3■□□□□ 0.84
SKIDA1-202ENST00000449193 SSFA2P28290 1259 aa20.3■□□□□ 0.84
SKIDA1-202ENST00000449193 DZIP3Q86Y13 1208 aaKnown RBP20.3■□□□□ 0.84
SKIDA1-202ENST00000449193 TFCP2L1Q9NZI6 479 aa20.3■□□□□ 0.84
SKIDA1-202ENST00000449193 CA8P35219 290 aa20.3■□□□□ 0.84
SKIDA1-202ENST00000449193 LMBR1LQ6UX01 489 aa20.3■□□□□ 0.84
SKIDA1-202ENST00000449193 C16orf71Q8IYS4 520 aaPredicted RBP20.3■□□□□ 0.84
SKIDA1-202ENST00000449193 HEATR3Q7Z4Q2 680 aa20.3■□□□□ 0.84
SKIDA1-202ENST00000449193 IQSEC3Q9UPP2 1182 aaPredicted RBP20.3■□□□□ 0.84
SKIDA1-202ENST00000449193 PPIP5K1Q6PFW1 1433 aa20.29■□□□□ 0.84
SKIDA1-202ENST00000449193 GRM1Q13255 1194 aa20.29■□□□□ 0.84
SKIDA1-202ENST00000449193 SLC39A6Q13433 755 aa20.29■□□□□ 0.84
SKIDA1-202ENST00000449193 SIRT1Q96EB6 747 aa20.29■□□□□ 0.84
SKIDA1-202ENST00000449193 PRPF4BQ13523 1007 aaKnown RBP20.29■□□□□ 0.84
SKIDA1-202ENST00000449193 EYA3Q99504 573 aa20.29■□□□□ 0.84
SKIDA1-202ENST00000449193 KRT13P13646 458 aa20.29■□□□□ 0.84
SKIDA1-202ENST00000449193 TMC6Q7Z403 805 aa20.29■□□□□ 0.84
SKIDA1-202ENST00000449193 RALGAPBQ86X10 1494 aa20.29■□□□□ 0.84
SKIDA1-202ENST00000449193 GOLGA6L9A6NEM1 432 aa20.29■□□□□ 0.84
SKIDA1-202ENST00000449193 LRRC45Q96CN5 670 aa20.29■□□□□ 0.84
SKIDA1-202ENST00000449193 SYNCQ9H7C4 482 aa20.29■□□□□ 0.84
SKIDA1-202ENST00000449193 VEZTQ9HBM0 779 aa20.29■□□□□ 0.84
SKIDA1-202ENST00000449193 SPECC1Q5M775 1068 aa20.28■□□□□ 0.84
SKIDA1-202ENST00000449193 BRF1Q92994 677 aa20.28■□□□□ 0.84
SKIDA1-202ENST00000449193 CAVIN2O95810 425 aa20.28■□□□□ 0.84
SKIDA1-202ENST00000449193 MCMDC2Q4G0Z9 681 aa20.28■□□□□ 0.84
SKIDA1-202ENST00000449193 MAGEB6P1A0A0J9YX57 407 aa20.28■□□□□ 0.84
SKIDA1-202ENST00000449193 PHACTR2O75167 634 aa20.28■□□□□ 0.84
SKIDA1-202ENST00000449193 ALG1Q9BT22 464 aa20.28■□□□□ 0.84
SKIDA1-202ENST00000449193 GNAT2P19087 354 aa20.27■□□□□ 0.84
SKIDA1-202ENST00000449193 STAT6P42226 847 aa20.27■□□□□ 0.84
SKIDA1-202ENST00000449193 HLTFQ14527 1009 aaKnown RBP eCLIP20.27■□□□□ 0.84
SKIDA1-202ENST00000449193 C6orf50Q9HD87 102 aa20.27■□□□□ 0.84
SKIDA1-202ENST00000449193 SLC9C2Q5TAH2 1124 aa20.27■□□□□ 0.84
SKIDA1-202ENST00000449193 TSNARE1Q96NA8 513 aa20.27■□□□□ 0.84
SKIDA1-202ENST00000449193 RBM27Q9P2N5 1060 aaKnown RBP20.27■□□□□ 0.84
SKIDA1-202ENST00000449193 NAPAP54920 295 aa20.27■□□□□ 0.84
SKIDA1-202ENST00000449193 NCBP1Q09161 790 aaKnown RBP20.27■□□□□ 0.84
SKIDA1-202ENST00000449193 TSHZ3Q63HK5 1081 aa20.27■□□□□ 0.84
SKIDA1-202ENST00000449193 PLVAPQ9BX97 442 aa20.27■□□□□ 0.84
SKIDA1-202ENST00000449193 MAP3K9P80192 1104 aa20.27■□□□□ 0.83
SKIDA1-202ENST00000449193 C11orf95C9JLR9 678 aaPredicted RBP20.26■□□□□ 0.83
SKIDA1-202ENST00000449193 POTEB2H3BUK9 544 aa20.26■□□□□ 0.83
SKIDA1-202ENST00000449193 MMRN2Q9H8L6 949 aa20.26■□□□□ 0.83
SKIDA1-202ENST00000449193 CALM1P0DP23 149 aa20.26■□□□□ 0.83
SKIDA1-202ENST00000449193 CALM2P0DP24 149 aa20.26■□□□□ 0.83
SKIDA1-202ENST00000449193 CALM3P0DP25 149 aa20.26■□□□□ 0.83
SKIDA1-202ENST00000449193 WDR7Q9Y4E6 1490 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms