RNA–Protein interactions for RNA: ENST00000449131.6

BEST1-202, Transcript of bestrophin 1, humanhuman

TSL 1 (best) BASIC

Gene BEST1, Length 4,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-202ENST00000449131 SOGA3Q5TF21 947 aa8.32□□□□□ -1.08
BEST1-202ENST00000449131 Q6ZUG5 572 aa8.32□□□□□ -1.08
BEST1-202ENST00000449131 RUFY1Q96T51 708 aa8.32□□□□□ -1.08
BEST1-202ENST00000449131 DNAJC5Q9H3Z4 198 aa8.32□□□□□ -1.08
BEST1-202ENST00000449131 LGR6Q9HBX8 967 aa8.32□□□□□ -1.08
BEST1-202ENST00000449131 ZNHIT6Q9NWK9 470 aaKnown RBP8.32□□□□□ -1.08
BEST1-202ENST00000449131 CCDC196A0A1B0GTZ2 297 aa8.32□□□□□ -1.08
BEST1-202ENST00000449131 RANBP6O60518 1105 aaKnown RBP8.32□□□□□ -1.08
BEST1-202ENST00000449131 SLC5A1P13866 664 aa8.32□□□□□ -1.08
BEST1-202ENST00000449131 CREB3L3Q68CJ9 461 aa8.32□□□□□ -1.08
BEST1-202ENST00000449131 CADPS2Q86UW7 1296 aa8.32□□□□□ -1.08
BEST1-202ENST00000449131 INTS4Q96HW7 963 aaKnown RBP8.32□□□□□ -1.08
BEST1-202ENST00000449131 DACT1Q9NYF0 836 aa8.32□□□□□ -1.08
BEST1-202ENST00000449131 RNMTO43148 476 aaKnown RBP8.31□□□□□ -1.08
BEST1-202ENST00000449131 TNNT1P13805 278 aa8.31□□□□□ -1.08
BEST1-202ENST00000449131 NOLC1Q14978 699 aaKnown RBP eCLIP8.31□□□□□ -1.08
BEST1-202ENST00000449131 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.31□□□□□ -1.08
BEST1-202ENST00000449131 KLF18A0A0U1RQI7 1052 aa8.31□□□□□ -1.08
BEST1-202ENST00000449131 ADAMTS2O95450 1211 aa8.31□□□□□ -1.08
BEST1-202ENST00000449131 KRT18P05783 430 aaKnown RBP8.31□□□□□ -1.08
BEST1-202ENST00000449131 SYT1P21579 422 aa8.31□□□□□ -1.08
BEST1-202ENST00000449131 IARSP41252 1262 aaKnown RBP8.31□□□□□ -1.08
BEST1-202ENST00000449131 NCOA7Q8NI08 942 aa8.31□□□□□ -1.08
BEST1-202ENST00000449131 ZCRB1Q8TBF4 217 aaKnown RBP8.31□□□□□ -1.08
BEST1-202ENST00000449131 PLEKHF1Q96S99 279 aa8.31□□□□□ -1.08
BEST1-202ENST00000449131 ZSCAN16Q9H4T2 348 aaPredicted RBP8.31□□□□□ -1.08
BEST1-202ENST00000449131 BICC1Q9H694 974 aaKnown RBP8.31□□□□□ -1.08
BEST1-202ENST00000449131 EXOC5O00471 708 aa8.31□□□□□ -1.08
BEST1-202ENST00000449131 NBPF7P0C2Y1 421 aaPredicted RBP8.31□□□□□ -1.08
BEST1-202ENST00000449131 CAVIN4Q5BKX8 364 aa8.31□□□□□ -1.08
BEST1-202ENST00000449131 TMEM67Q5HYA8 995 aa8.31□□□□□ -1.08
BEST1-202ENST00000449131 CNNM3Q8NE01 707 aa8.31□□□□□ -1.08
BEST1-202ENST00000449131 ZHX3Q9H4I2 956 aa8.31□□□□□ -1.08
BEST1-202ENST00000449131 LMBRD1Q9NUN5 540 aa8.31□□□□□ -1.08
BEST1-202ENST00000449131 CEP131Q9UPN4 1083 aa8.31□□□□□ -1.08
BEST1-202ENST00000449131 STX1AQ16623 288 aa8.3□□□□□ -1.08
BEST1-202ENST00000449131 TMCO4Q5TGY1 634 aa8.3□□□□□ -1.08
BEST1-202ENST00000449131 CCDC186Q7Z3E2 898 aa8.3□□□□□ -1.08
BEST1-202ENST00000449131 DDX21Q9NR30 783 aaKnown RBP eCLIP8.3□□□□□ -1.08
BEST1-202ENST00000449131 SSBP05455 408 aaKnown RBP eCLIP8.3□□□□□ -1.08
BEST1-202ENST00000449131 SSRP1Q08945 709 aaKnown RBP8.3□□□□□ -1.08
BEST1-202ENST00000449131 TFCP2Q12800 502 aa8.3□□□□□ -1.08
BEST1-202ENST00000449131 CHST3Q7LGC8 479 aa8.3□□□□□ -1.08
BEST1-202ENST00000449131 UBXN4Q92575 508 aa8.3□□□□□ -1.08
BEST1-202ENST00000449131 TEX13AQ9BXU3 409 aaPredicted RBP8.3□□□□□ -1.08
BEST1-202ENST00000449131 ERBB4Q15303 1308 aa8.3□□□□□ -1.08
BEST1-202ENST00000449131 SBNO1A3KN83 1393 aa8.3□□□□□ -1.08
BEST1-202ENST00000449131 KDM5AP29375 1690 aaKnown RBP8.3□□□□□ -1.08
BEST1-202ENST00000449131 IL15P40933 162 aaPredicted RBP8.3□□□□□ -1.08
BEST1-202ENST00000449131 ANO6Q4KMQ2 910 aa8.3□□□□□ -1.08
BEST1-202ENST00000449131 KIF18AQ8NI77 898 aa8.3□□□□□ -1.08
BEST1-202ENST00000449131 KLHDC4Q8TBB5 520 aa8.3□□□□□ -1.08
BEST1-202ENST00000449131 PPP1R1BQ9UD71 204 aaPredicted RBP8.3□□□□□ -1.08
BEST1-202ENST00000449131 PALD1Q9ULE6 856 aa8.3□□□□□ -1.08
BEST1-202ENST00000449131 ZNF652Q9Y2D9 606 aa8.3□□□□□ -1.08
BEST1-202ENST00000449131 ABCC4O15439 1325 aa8.3□□□□□ -1.08
BEST1-202ENST00000449131 TOP1P11387 765 aaKnown RBP8.29□□□□□ -1.08
BEST1-202ENST00000449131 METAP2P50579 478 aaKnown RBP eCLIP8.29□□□□□ -1.08
BEST1-202ENST00000449131 PIP4K2BP78356 416 aa8.29□□□□□ -1.08
BEST1-202ENST00000449131 ATP2B3Q16720 1220 aa8.29□□□□□ -1.08
BEST1-202ENST00000449131 IQCA1Q86XH1 822 aa8.29□□□□□ -1.08
BEST1-202ENST00000449131 CTCFLQ8NI51 663 aaPredicted RBP8.29□□□□□ -1.08
BEST1-202ENST00000449131 AK7Q96M32 723 aa8.29□□□□□ -1.08
BEST1-202ENST00000449131 NDUFB9Q9Y6M9 179 aa8.29□□□□□ -1.08
BEST1-202ENST00000449131 TRPM2O94759 1503 aa8.29□□□□□ -1.08
BEST1-202ENST00000449131 TTF1Q15361 905 aaPredicted RBP8.29□□□□□ -1.08
BEST1-202ENST00000449131 TMC6Q7Z403 805 aa8.29□□□□□ -1.08
BEST1-202ENST00000449131 FAM200AQ8TCP9 573 aa8.29□□□□□ -1.08
BEST1-202ENST00000449131 CCDC171Q6TFL3 1326 aa8.29□□□□□ -1.08
BEST1-202ENST00000449131 LUZP1Q86V48 1076 aa8.29□□□□□ -1.08
BEST1-202ENST00000449131 ERCC4Q92889 916 aaPredicted RBP8.29□□□□□ -1.08
BEST1-202ENST00000449131 SLC26A6Q9BXS9 759 aa8.29□□□□□ -1.08
BEST1-202ENST00000449131 TANGO6Q9C0B7 1094 aa8.29□□□□□ -1.08
BEST1-202ENST00000449131 RNF41Q9H4P4 317 aaPredicted RBP8.29□□□□□ -1.08
BEST1-202ENST00000449131 MKNK2Q9HBH9 465 aa8.29□□□□□ -1.08
BEST1-202ENST00000449131 PAG1Q9NWQ8 432 aa8.29□□□□□ -1.08
BEST1-202ENST00000449131 EPB41L2O43491 1005 aaKnown RBP8.29□□□□□ -1.08
BEST1-202ENST00000449131 URI1O94763 535 aaPredicted RBP8.29□□□□□ -1.08
BEST1-202ENST00000449131 USP5P45974 858 aa8.29□□□□□ -1.08
BEST1-202ENST00000449131 ARHGAP29Q52LW3 1261 aa8.29□□□□□ -1.08
BEST1-202ENST00000449131 RUFY3Q7L099 469 aa8.29□□□□□ -1.08
BEST1-202ENST00000449131 ZFP91Q96JP5 570 aaPredicted RBP8.29□□□□□ -1.08
BEST1-202ENST00000449131 DEF6Q9H4E7 631 aa8.29□□□□□ -1.08
BEST1-202ENST00000449131 NSFL1CQ9UNZ2 370 aaKnown RBP8.29□□□□□ -1.08
BEST1-202ENST00000449131 PLXNC1O60486 1568 aa8.28□□□□□ -1.08
BEST1-202ENST00000449131 PLEKHG3A1L390 1219 aa8.28□□□□□ -1.08
BEST1-202ENST00000449131 KIF2AO00139 706 aaPredicted RBP8.28□□□□□ -1.08
BEST1-202ENST00000449131 SGSM2O43147 1006 aa8.28□□□□□ -1.08
BEST1-202ENST00000449131 PTGS1P23219 599 aa8.28□□□□□ -1.08
BEST1-202ENST00000449131 DNAJC25Q9H1X3 360 aa8.28□□□□□ -1.08
BEST1-202ENST00000449131 CGNQ9P2M7 1197 aaKnown RBP8.28□□□□□ -1.08
BEST1-202ENST00000449131 ABCA9Q8IUA7 1624 aa8.28□□□□□ -1.08
BEST1-202ENST00000449131 MLH3Q9UHC1 1453 aa8.28□□□□□ -1.08
BEST1-202ENST00000449131 NPHP3Q7Z494 1330 aa8.28□□□□□ -1.08
BEST1-202ENST00000449131 ZFYP08048 801 aaPredicted RBP8.28□□□□□ -1.08
BEST1-202ENST00000449131 NBPF6Q5VWK0 638 aa8.28□□□□□ -1.08
BEST1-202ENST00000449131 MFSD6Q6ZSS7 791 aa8.28□□□□□ -1.08
BEST1-202ENST00000449131 CPLX3Q8WVH0 158 aa8.28□□□□□ -1.08
BEST1-202ENST00000449131 NBPF4Q96M43 638 aa8.28□□□□□ -1.08
BEST1-202ENST00000449131 ORAI2Q96SN7 254 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms