RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 DDX46Q7L014 1031 aaKnown RBP23.69■■□□□ 1.38
CHCHD3-203ENST00000448878 SAPCD2Q86UD0 394 aa23.69■■□□□ 1.38
CHCHD3-203ENST00000448878 SP8Q8IXZ3 490 aa23.69■■□□□ 1.38
CHCHD3-203ENST00000448878 MLLT1Q03111 559 aaPredicted RBP23.68■■□□□ 1.38
CHCHD3-203ENST00000448878 ZNF428Q96B54 188 aa23.68■■□□□ 1.38
CHCHD3-203ENST00000448878 RTFDC1Q9BY42 306 aaPredicted RBP23.68■■□□□ 1.38
CHCHD3-203ENST00000448878 PROSER3Q2NL68 480 aa23.67■■□□□ 1.38
CHCHD3-203ENST00000448878 COPS6Q7L5N1 327 aa23.67■■□□□ 1.38
CHCHD3-203ENST00000448878 TRMT112Q9UI30 125 aaKnown RBP23.67■■□□□ 1.38
CHCHD3-203ENST00000448878 RIPK4P57078 832 aa23.66■■□□□ 1.38
CHCHD3-203ENST00000448878 KIAA2012Q0VF49 1180 aa23.66■■□□□ 1.38
CHCHD3-203ENST00000448878 PDIA6Q15084 440 aa23.66■■□□□ 1.38
CHCHD3-203ENST00000448878 HSP90AB3PQ58FF7 597 aa23.66■■□□□ 1.38
CHCHD3-203ENST00000448878 CNOT7Q9UIV1 285 aaKnown RBP23.66■■□□□ 1.38
CHCHD3-203ENST00000448878 H7C1D1 291 aa23.65■■□□□ 1.38
CHCHD3-203ENST00000448878 CDC37L1Q7L3B6 337 aa23.65■■□□□ 1.38
CHCHD3-203ENST00000448878 THSD7BQ9C0I4 1608 aa23.65■■□□□ 1.38
CHCHD3-203ENST00000448878 HIRAP54198 1017 aaPredicted RBP23.64■■□□□ 1.37
CHCHD3-203ENST00000448878 GRAPQ13588 217 aa23.64■■□□□ 1.37
CHCHD3-203ENST00000448878 LRP10Q7Z4F1 713 aa23.64■■□□□ 1.37
CHCHD3-203ENST00000448878 NLRP10Q86W26 655 aa23.64■■□□□ 1.37
CHCHD3-203ENST00000448878 GRAPLQ8TC17 118 aaPredicted RBP23.64■■□□□ 1.37
CHCHD3-203ENST00000448878 XAGE3Q8WTP9 111 aa23.64■■□□□ 1.37
CHCHD3-203ENST00000448878 CA12O43570 354 aa23.63■■□□□ 1.37
CHCHD3-203ENST00000448878 TRPM4Q8TD43 1214 aa23.63■■□□□ 1.37
CHCHD3-203ENST00000448878 ZC3H15Q8WU90 426 aaKnown RBP23.63■■□□□ 1.37
CHCHD3-203ENST00000448878 PGAP2Q9UHJ9 254 aa23.63■■□□□ 1.37
CHCHD3-203ENST00000448878 CDHR2Q9BYE9 1310 aa23.62■■□□□ 1.37
CHCHD3-203ENST00000448878 USP48Q86UV5 1035 aa23.62■■□□□ 1.37
CHCHD3-203ENST00000448878 HHIPL1Q96JK4 782 aa23.62■■□□□ 1.37
CHCHD3-203ENST00000448878 MCOLN1Q9GZU1 580 aa23.62■■□□□ 1.37
CHCHD3-203ENST00000448878 SH3TC1Q8TE82 1336 aa23.61■■□□□ 1.37
CHCHD3-203ENST00000448878 SHTN1A0MZ66 631 aa23.61■■□□□ 1.37
CHCHD3-203ENST00000448878 BRPF1P55201 1214 aaPredicted RBP23.61■■□□□ 1.37
CHCHD3-203ENST00000448878 TCIRG1Q13488 830 aa23.61■■□□□ 1.37
CHCHD3-203ENST00000448878 MICALL2Q8IY33 904 aa23.61■■□□□ 1.37
CHCHD3-203ENST00000448878 ZBTB12Q9Y330 459 aaPredicted RBP23.61■■□□□ 1.37
CHCHD3-203ENST00000448878 DGKZQ13574 1117 aa23.6■■□□□ 1.37
CHCHD3-203ENST00000448878 LAS1LQ9Y4W2 734 aaKnown RBP23.6■■□□□ 1.37
CHCHD3-203ENST00000448878 YDJCA8MPS7 323 aa23.59■■□□□ 1.37
CHCHD3-203ENST00000448878 RIMBP2O15034 1052 aa23.59■■□□□ 1.37
CHCHD3-203ENST00000448878 HUNKP57058 714 aa23.59■■□□□ 1.37
CHCHD3-203ENST00000448878 NEUROD2Q15784 382 aa23.59■■□□□ 1.37
CHCHD3-203ENST00000448878 WASHC4Q2M389 1173 aa23.59■■□□□ 1.37
CHCHD3-203ENST00000448878 RBM26Q5T8P6 1007 aaKnown RBP23.59■■□□□ 1.37
CHCHD3-203ENST00000448878 NSFL1CQ9UNZ2 370 aaKnown RBP23.59■■□□□ 1.37
CHCHD3-203ENST00000448878 LAMB2P55268 1798 aa23.58■■□□□ 1.37
CHCHD3-203ENST00000448878 C6orf229H3BNL8 230 aa23.58■■□□□ 1.37
CHCHD3-203ENST00000448878 DLK2Q6UY11 383 aa23.58■■□□□ 1.37
CHCHD3-203ENST00000448878 SAMD7Q7Z3H4 446 aa23.58■■□□□ 1.37
CHCHD3-203ENST00000448878 DBNDD1Q9H9R9 158 aa23.58■■□□□ 1.37
CHCHD3-203ENST00000448878 LMOD3Q0VAK6 560 aa23.57■■□□□ 1.36
CHCHD3-203ENST00000448878 NOGQ13253 232 aa23.57■■□□□ 1.36
CHCHD3-203ENST00000448878 TBC1D10BQ4KMP7 808 aaPredicted RBP23.57■■□□□ 1.36
CHCHD3-203ENST00000448878 TMC4Q7Z404 712 aa23.57■■□□□ 1.36
CHCHD3-203ENST00000448878 BABAM1Q9NWV8 329 aa23.57■■□□□ 1.36
CHCHD3-203ENST00000448878 TAF1P21675 1872 aa23.56■■□□□ 1.36
CHCHD3-203ENST00000448878 ANKRD36CQ5JPF3 1778 aa23.56■■□□□ 1.36
CHCHD3-203ENST00000448878 PSMD14O00487 310 aa23.56■■□□□ 1.36
CHCHD3-203ENST00000448878 SLC34A2O95436 690 aa23.56■■□□□ 1.36
CHCHD3-203ENST00000448878 RGS19P49795 217 aa23.56■■□□□ 1.36
CHCHD3-203ENST00000448878 CASP8AP2Q9UKL3 1982 aa23.55■■□□□ 1.36
CHCHD3-203ENST00000448878 TMPOP42166 694 aaKnown RBP23.55■■□□□ 1.36
CHCHD3-203ENST00000448878 RTL5Q5HYW3 569 aaPredicted RBP23.55■■□□□ 1.36
CHCHD3-203ENST00000448878 KRT26Q7Z3Y9 468 aa23.55■■□□□ 1.36
CHCHD3-203ENST00000448878 ZIC5Q96T25 663 aa23.55■■□□□ 1.36
CHCHD3-203ENST00000448878 KRT24Q2M2I5 525 aa23.54■■□□□ 1.36
CHCHD3-203ENST00000448878 C2orf69Q8N8R5 385 aa23.54■■□□□ 1.36
CHCHD3-203ENST00000448878 DPF2Q92785 391 aa23.54■■□□□ 1.36
CHCHD3-203ENST00000448878 DCPSQ96C86 337 aaKnown RBP23.54■■□□□ 1.36
CHCHD3-203ENST00000448878 FAM89AQ96GI7 184 aa23.54■■□□□ 1.36
CHCHD3-203ENST00000448878 DOK7Q18PE1 504 aa23.53■■□□□ 1.36
CHCHD3-203ENST00000448878 CELF1Q92879 486 aaKnown RBP23.53■■□□□ 1.36
CHCHD3-203ENST00000448878 CHPF2Q9P2E5 772 aa23.53■■□□□ 1.36
CHCHD3-203ENST00000448878 ATP5J2-PTCD1G3V325 749 aa23.52■■□□□ 1.36
CHCHD3-203ENST00000448878 G3V3G9 751 aa23.52■■□□□ 1.36
CHCHD3-203ENST00000448878 DCAF8Q5TAQ9 597 aa23.52■■□□□ 1.36
CHCHD3-203ENST00000448878 RGMBQ6NW40 437 aa23.52■■□□□ 1.36
CHCHD3-203ENST00000448878 GBA2Q9HCG7 927 aaPredicted RBP23.52■■□□□ 1.36
CHCHD3-203ENST00000448878 ANKRD13DQ6ZTN6 518 aa23.51■■□□□ 1.35
CHCHD3-203ENST00000448878 CCDC146Q8IYE0 955 aa23.51■■□□□ 1.35
CHCHD3-203ENST00000448878 PLBD2Q8NHP8 589 aa23.51■■□□□ 1.35
CHCHD3-203ENST00000448878 EYA3Q99504 573 aa23.51■■□□□ 1.35
CHCHD3-203ENST00000448878 KCNQ5Q9NR82 932 aa23.51■■□□□ 1.35
CHCHD3-203ENST00000448878 ADM5C9JUS6 153 aa23.5■■□□□ 1.35
CHCHD3-203ENST00000448878 ECE2O60344 883 aa23.5■■□□□ 1.35
CHCHD3-203ENST00000448878 EGFRP00533 1210 aa23.5■■□□□ 1.35
CHCHD3-203ENST00000448878 ZNF157P51786 506 aaPredicted RBP23.5■■□□□ 1.35
CHCHD3-203ENST00000448878 GPSM2P81274 684 aa23.5■■□□□ 1.35
CHCHD3-203ENST00000448878 HDGFL1Q5TGJ6 251 aa23.5■■□□□ 1.35
CHCHD3-203ENST00000448878 POLLQ9UGP5 575 aa23.5■■□□□ 1.35
CHCHD3-203ENST00000448878 CCDC102AQ96A19 550 aa23.49■■□□□ 1.35
CHCHD3-203ENST00000448878 DUOX1Q9NRD9 1551 aa23.48■■□□□ 1.35
CHCHD3-203ENST00000448878 RPS12P25398 132 aaKnown RBP23.48■■□□□ 1.35
CHCHD3-203ENST00000448878 KIF23Q02241 960 aaPredicted RBP23.48■■□□□ 1.35
CHCHD3-203ENST00000448878 SF3B3Q15393 1217 aaKnown RBP23.48■■□□□ 1.35
CHCHD3-203ENST00000448878 ZC3H12CQ9C0D7 883 aaKnown RBP23.48■■□□□ 1.35
CHCHD3-203ENST00000448878 KIF4BQ2VIQ3 1234 aa23.47■■□□□ 1.35
CHCHD3-203ENST00000448878 CHL1O00533 1208 aa23.46■■□□□ 1.35
CHCHD3-203ENST00000448878 IRS4O14654 1257 aaPredicted RBP23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms