RNA–Protein interactions for RNA: ENST00000448850.5

APP-210, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-210ENST00000448850 TTLL11Q8NHH1 800 aa18.14■□□□□ 0.49
APP-210ENST00000448850 PARP3Q9Y6F1 533 aa18.14■□□□□ 0.49
APP-210ENST00000448850 CHMP3Q9Y3E7 222 aa18.13■□□□□ 0.49
APP-210ENST00000448850 CCDC24Q8N4L8 307 aa18.12■□□□□ 0.49
APP-210ENST00000448850 DCTPP1Q9H773 170 aa18.12■□□□□ 0.49
APP-210ENST00000448850 RIC1Q4ADV7 1423 aa18.12■□□□□ 0.49
APP-210ENST00000448850 ST5P78524 1137 aa18.12■□□□□ 0.49
APP-210ENST00000448850 SMC5Q8IY18 1101 aa18.12■□□□□ 0.49
APP-210ENST00000448850 GCC1Q96CN9 775 aa18.12■□□□□ 0.49
APP-210ENST00000448850 RFX5P48382 616 aaPredicted RBP18.1■□□□□ 0.49
APP-210ENST00000448850 FAM161AQ3B820 660 aa18.1■□□□□ 0.49
APP-210ENST00000448850 NLRP3Q96P20 1036 aa18.1■□□□□ 0.49
APP-210ENST00000448850 CCDC85AQ96PX6 553 aaPredicted RBP18.1■□□□□ 0.49
APP-210ENST00000448850 SF3B3Q15393 1217 aaKnown RBP18.09■□□□□ 0.49
APP-210ENST00000448850 CCDC57Q2TAC2 916 aa18.09■□□□□ 0.49
APP-210ENST00000448850 CCDC152Q4G0S7 254 aa18.09■□□□□ 0.49
APP-210ENST00000448850 GREM2Q9H772 168 aa18.09■□□□□ 0.49
APP-210ENST00000448850 PSDA5PKW4 1024 aaPredicted RBP18.09■□□□□ 0.49
APP-210ENST00000448850 SURF6O75683 361 aaKnown RBP18.09■□□□□ 0.49
APP-210ENST00000448850 IFIT5Q13325 482 aaKnown RBP18.09■□□□□ 0.49
APP-210ENST00000448850 C3orf67Q6ZVT6 689 aa18.09■□□□□ 0.49
APP-210ENST00000448850 COPRSQ9NQ92 184 aa18.09■□□□□ 0.49
APP-210ENST00000448850 RTL9Q8NET4 1388 aa18.09■□□□□ 0.49
APP-210ENST00000448850 PTPN12Q05209 780 aaKnown RBP18.08■□□□□ 0.48
APP-210ENST00000448850 KLHDC4Q8TBB5 520 aa18.08■□□□□ 0.48
APP-210ENST00000448850 PA2G4Q9UQ80 394 aaKnown RBP18.08■□□□□ 0.48
APP-210ENST00000448850 EXOC6BQ9Y2D4 811 aa18.08■□□□□ 0.48
APP-210ENST00000448850 NOP58Q9Y2X3 529 aaKnown RBP18.08■□□□□ 0.48
APP-210ENST00000448850 ANKRD18BA2A2Z9 1011 aa18.07■□□□□ 0.48
APP-210ENST00000448850 ZBTB7AO95365 584 aa18.07■□□□□ 0.48
APP-210ENST00000448850 ITGA6P23229 1130 aa18.07■□□□□ 0.48
APP-210ENST00000448850 MTFR1LQ9H019 292 aa18.07■□□□□ 0.48
APP-210ENST00000448850 KIF13BQ9NQT8 1826 aa18.07■□□□□ 0.48
APP-210ENST00000448850 HSP90AB4PQ58FF6 505 aa18.06■□□□□ 0.48
APP-210ENST00000448850 COL11A2P13942 1736 aaPredicted RBP18.06■□□□□ 0.48
APP-210ENST00000448850 CACNA1SQ13698 1873 aa18.06■□□□□ 0.48
APP-210ENST00000448850 ZNF594Q96JF6 807 aaPredicted RBP18.05■□□□□ 0.48
APP-210ENST00000448850 BRIP1Q9BX63 1249 aa18.05■□□□□ 0.48
APP-210ENST00000448850 SEC31BQ9NQW1 1179 aa18.05■□□□□ 0.48
APP-210ENST00000448850 RAB11FIP3O75154 756 aa18.05■□□□□ 0.48
APP-210ENST00000448850 G3BP1Q13283 466 aaKnown RBP eCLIP18.05■□□□□ 0.48
APP-210ENST00000448850 TAF7LQ5H9L4 462 aa18.05■□□□□ 0.48
APP-210ENST00000448850 SIL1Q9H173 461 aa18.05■□□□□ 0.48
APP-210ENST00000448850 A0A1B0GUL6 1792 aa18.04■□□□□ 0.48
APP-210ENST00000448850 LRP5O75197 1615 aa18.04■□□□□ 0.48
APP-210ENST00000448850 KLRG2A4D1S0 409 aaPredicted RBP18.04■□□□□ 0.48
APP-210ENST00000448850 OS9Q13438 667 aaPredicted RBP18.04■□□□□ 0.48
APP-210ENST00000448850 CRY2Q49AN0 593 aa18.04■□□□□ 0.48
APP-210ENST00000448850 ANKRD45Q5TZF3 282 aa18.04■□□□□ 0.48
APP-210ENST00000448850 PDZRN3Q9UPQ7 1066 aa18.04■□□□□ 0.48
APP-210ENST00000448850 ATF5Q9Y2D1 282 aaPredicted RBP18.04■□□□□ 0.48
APP-210ENST00000448850 COL4A1P02462 1669 aa18.04■□□□□ 0.48
APP-210ENST00000448850 APBB1O00213 710 aa18.03■□□□□ 0.48
APP-210ENST00000448850 NUCB1Q02818 461 aa18.03■□□□□ 0.48
APP-210ENST00000448850 FBXO3Q9UK99 471 aa18.03■□□□□ 0.48
APP-210ENST00000448850 DLEC1Q9Y238 1755 aa18.03■□□□□ 0.48
APP-210ENST00000448850 EYA2O00167 538 aa18.02■□□□□ 0.48
APP-210ENST00000448850 POLD1P28340 1107 aa18.02■□□□□ 0.48
APP-210ENST00000448850 PDE6BP35913 854 aa18.02■□□□□ 0.48
APP-210ENST00000448850 ERC1Q8IUD2 1116 aa18.02■□□□□ 0.48
APP-210ENST00000448850 CDC5LQ99459 802 aaKnown RBP18.02■□□□□ 0.48
APP-210ENST00000448850 CIAO1O76071 339 aa18.02■□□□□ 0.47
APP-210ENST00000448850 DDX46Q7L014 1031 aaKnown RBP18.02■□□□□ 0.47
APP-210ENST00000448850 LRRCC1Q9C099 1032 aa18.02■□□□□ 0.47
APP-210ENST00000448850 ZBTB47Q9UFB7 747 aaPredicted RBP18.02■□□□□ 0.47
APP-210ENST00000448850 LDHAL6AQ6ZMR3 332 aa18.01■□□□□ 0.47
APP-210ENST00000448850 ATG9AQ7Z3C6 839 aa18.01■□□□□ 0.47
APP-210ENST00000448850 CHD1LQ86WJ1 897 aa18.01■□□□□ 0.47
APP-210ENST00000448850 RHPN1Q8TCX5 695 aa18.01■□□□□ 0.47
APP-210ENST00000448850 RPGRQ92834 1020 aaKnown RBP18.01■□□□□ 0.47
APP-210ENST00000448850 KIF1BPQ96EK5 621 aa18.01■□□□□ 0.47
APP-210ENST00000448850 PUS3Q9BZE2 481 aaKnown RBP18.01■□□□□ 0.47
APP-210ENST00000448850 SASH1O94885 1247 aa18■□□□□ 0.47
APP-210ENST00000448850 IGHMBP2P38935 993 aaKnown RBP18■□□□□ 0.47
APP-210ENST00000448850 IL15P40933 162 aaPredicted RBP18■□□□□ 0.47
APP-210ENST00000448850 LRRC24Q50LG9 513 aa18■□□□□ 0.47
APP-210ENST00000448850 C10orf71Q711Q0 1435 aa18■□□□□ 0.47
APP-210ENST00000448850 SMARCA5O60264 1052 aaPredicted RBP18■□□□□ 0.47
APP-210ENST00000448850 ANKRD18AQ8IVF6 992 aa18■□□□□ 0.47
APP-210ENST00000448850 MPHOSPH8Q99549 860 aa18■□□□□ 0.47
APP-210ENST00000448850 LNPKQ9C0E8 428 aa18■□□□□ 0.47
APP-210ENST00000448850 CNNM1Q9NRU3 951 aa18■□□□□ 0.47
APP-210ENST00000448850 HOXA10P31260 410 aaPredicted RBP17.99■□□□□ 0.47
APP-210ENST00000448850 CELF1Q92879 486 aaKnown RBP17.99■□□□□ 0.47
APP-210ENST00000448850 RBM17Q96I25 401 aaKnown RBP17.99■□□□□ 0.47
APP-210ENST00000448850 RIPOR2Q9Y4F9 1068 aa17.99■□□□□ 0.47
APP-210ENST00000448850 SRGNP10124 158 aa17.98■□□□□ 0.47
APP-210ENST00000448850 RPS8P62241 208 aaKnown RBP17.98■□□□□ 0.47
APP-210ENST00000448850 SGIP1Q9BQI5 828 aa17.98■□□□□ 0.47
APP-210ENST00000448850 GRAPQ13588 217 aa17.98■□□□□ 0.47
APP-210ENST00000448850 GRAPLQ8TC17 118 aaPredicted RBP17.98■□□□□ 0.47
APP-210ENST00000448850 IL1RAPL2Q9NP60 686 aa17.98■□□□□ 0.47
APP-210ENST00000448850 KIAA1551Q9HCM1 1747 aa17.98■□□□□ 0.47
APP-210ENST00000448850 NPR1P16066 1061 aa17.97■□□□□ 0.47
APP-210ENST00000448850 TFCP2Q12800 502 aa17.97■□□□□ 0.47
APP-210ENST00000448850 CRAMP1Q96RY5 1269 aa17.97■□□□□ 0.47
APP-210ENST00000448850 BSDC1Q9NW68 430 aaPredicted RBP17.97■□□□□ 0.47
APP-210ENST00000448850 H0YIN7 160 aa17.96■□□□□ 0.47
APP-210ENST00000448850 PTGER2P43116 358 aa17.96■□□□□ 0.47
APP-210ENST00000448850 SKAP1Q86WV1 359 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms