RNA–Protein interactions for RNA: ENST00000448582.6

FAM60A-202, Transcript of Protein FAM60A, humanhuman

TSL 1 (best)

Gene FAM60A, Length 3,111 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM60A-202ENST00000448582 DCCP43146 1447 aa6.68□□□□□ -1.34
FAM60A-202ENST00000448582 RBM5P52756 815 aaKnown RBP eCLIP6.68□□□□□ -1.34
FAM60A-202ENST00000448582 HMGN5P82970 282 aaKnown RBP6.68□□□□□ -1.34
FAM60A-202ENST00000448582 FAM161AQ3B820 660 aa6.68□□□□□ -1.34
FAM60A-202ENST00000448582 C22orf23Q9BZE7 217 aa6.68□□□□□ -1.34
FAM60A-202ENST00000448582 TMEM63CQ9P1W3 806 aa6.68□□□□□ -1.34
FAM60A-202ENST00000448582 FEZ2Q9UHY8 353 aaPredicted RBP6.68□□□□□ -1.34
FAM60A-202ENST00000448582 PPFIA3O75145 1194 aa6.68□□□□□ -1.34
FAM60A-202ENST00000448582 FGAP02671 866 aa6.68□□□□□ -1.34
FAM60A-202ENST00000448582 ZNF746Q6NUN9 644 aaPredicted RBP6.68□□□□□ -1.34
FAM60A-202ENST00000448582 JAMLQ86YT9 394 aa6.68□□□□□ -1.34
FAM60A-202ENST00000448582 CLTCQ00610 1675 aaKnown RBP6.68□□□□□ -1.34
FAM60A-202ENST00000448582 SPATA31E1Q6ZUB1 1445 aa6.68□□□□□ -1.34
FAM60A-202ENST00000448582 PRDM15P57071 1507 aaPredicted RBP6.68□□□□□ -1.34
FAM60A-202ENST00000448582 HMGB1P1B2RPK0 211 aaPredicted RBP6.67□□□□□ -1.34
FAM60A-202ENST00000448582 MPHOSPH10O00566 681 aaKnown RBP6.67□□□□□ -1.34
FAM60A-202ENST00000448582 NPHP1O15259 732 aa6.67□□□□□ -1.34
FAM60A-202ENST00000448582 TNNT2P45379 298 aaPredicted RBP6.67□□□□□ -1.34
FAM60A-202ENST00000448582 PIP4K2BP78356 416 aa6.67□□□□□ -1.34
FAM60A-202ENST00000448582 DALRD3Q5D0E6 543 aaKnown RBP6.67□□□□□ -1.34
FAM60A-202ENST00000448582 EPAS1Q99814 870 aa6.67□□□□□ -1.34
FAM60A-202ENST00000448582 RNF123Q5XPI4 1314 aa6.67□□□□□ -1.34
FAM60A-202ENST00000448582 SMG6Q86US8 1419 aaKnown RBP6.67□□□□□ -1.34
FAM60A-202ENST00000448582 NBPF8Q3BBV2 869 aa6.67□□□□□ -1.34
FAM60A-202ENST00000448582 C14orf80Q86SX3 495 aa6.67□□□□□ -1.34
FAM60A-202ENST00000448582 RELL1Q8IUW5 271 aa6.67□□□□□ -1.34
FAM60A-202ENST00000448582 VPS37AQ8NEZ2 397 aa6.67□□□□□ -1.34
FAM60A-202ENST00000448582 MKS1Q9NXB0 559 aa6.67□□□□□ -1.34
FAM60A-202ENST00000448582 EVLQ9UI08 416 aaPredicted RBP6.67□□□□□ -1.34
FAM60A-202ENST00000448582 BRWD3Q6RI45 1802 aa6.67□□□□□ -1.34
FAM60A-202ENST00000448582 A6NCN8 305 aa6.67□□□□□ -1.34
FAM60A-202ENST00000448582 SPDYE5A6NIY4 337 aa6.67□□□□□ -1.34
FAM60A-202ENST00000448582 BOLA2-SMG1P6H3BVE0 249 aa6.67□□□□□ -1.34
FAM60A-202ENST00000448582 VDRP11473 427 aa6.67□□□□□ -1.34
FAM60A-202ENST00000448582 ATP2B1P20020 1258 aa6.67□□□□□ -1.34
FAM60A-202ENST00000448582 ZKSCAN8Q15776 578 aaPredicted RBP6.67□□□□□ -1.34
FAM60A-202ENST00000448582 UVSSAQ2YD98 709 aa6.67□□□□□ -1.34
FAM60A-202ENST00000448582 DRC7Q8IY82 874 aa6.67□□□□□ -1.34
FAM60A-202ENST00000448582 PHC3Q8NDX5 983 aa6.67□□□□□ -1.34
FAM60A-202ENST00000448582 FLCNQ8NFG4 579 aa6.67□□□□□ -1.34
FAM60A-202ENST00000448582 AVENQ9NQS1 362 aaPredicted RBP6.67□□□□□ -1.34
FAM60A-202ENST00000448582 TFIP11Q9UBB9 837 aaKnown RBP6.67□□□□□ -1.34
FAM60A-202ENST00000448582 SYNPO2Q9UMS6 1093 aa6.67□□□□□ -1.34
FAM60A-202ENST00000448582 CCDC85CA6NKD9 419 aa6.66□□□□□ -1.34
FAM60A-202ENST00000448582 TRIM64CA6NLI5 447 aa6.66□□□□□ -1.34
FAM60A-202ENST00000448582 PAX7P23759 505 aa6.66□□□□□ -1.34
FAM60A-202ENST00000448582 MAP2K5Q13163 448 aa6.66□□□□□ -1.34
FAM60A-202ENST00000448582 MTMR3Q13615 1198 aa6.66□□□□□ -1.34
FAM60A-202ENST00000448582 PPP4R3BQ5MIZ7 849 aa6.66□□□□□ -1.34
FAM60A-202ENST00000448582 B4GALNT3Q6L9W6 998 aa6.66□□□□□ -1.34
FAM60A-202ENST00000448582 CWC25Q9NXE8 425 aaPredicted RBP6.66□□□□□ -1.34
FAM60A-202ENST00000448582 MBD5Q9P267 1494 aa6.66□□□□□ -1.34
FAM60A-202ENST00000448582 FAM43AQ8N2R8 423 aa6.66□□□□□ -1.34
FAM60A-202ENST00000448582 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.66□□□□□ -1.34
FAM60A-202ENST00000448582 HELQQ8TDG4 1101 aa6.66□□□□□ -1.34
FAM60A-202ENST00000448582 CCDC7Q96M83 1385 aa6.66□□□□□ -1.34
FAM60A-202ENST00000448582 ANKRD30AQ9BXX3 1397 aa6.66□□□□□ -1.34
FAM60A-202ENST00000448582 ENAMQ9NRM1 1142 aa6.66□□□□□ -1.34
FAM60A-202ENST00000448582 KIAA1107Q9UPP5 1409 aa6.66□□□□□ -1.34
FAM60A-202ENST00000448582 PIP5K1CO60331 668 aa6.65□□□□□ -1.34
FAM60A-202ENST00000448582 BPNT1O95861 308 aa6.65□□□□□ -1.34
FAM60A-202ENST00000448582 HSPA6P17066 643 aa6.65□□□□□ -1.34
FAM60A-202ENST00000448582 SATB1Q01826 763 aa6.65□□□□□ -1.34
FAM60A-202ENST00000448582 SEPT2Q15019 361 aa6.65□□□□□ -1.34
FAM60A-202ENST00000448582 PDXDC1Q6P996 788 aa6.65□□□□□ -1.34
FAM60A-202ENST00000448582 SNX32Q86XE0 403 aa6.65□□□□□ -1.34
FAM60A-202ENST00000448582 IPCEF1Q8WWN9 437 aaPredicted RBP6.65□□□□□ -1.34
FAM60A-202ENST00000448582 TMEM87BQ96K49 555 aa6.65□□□□□ -1.34
FAM60A-202ENST00000448582 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.65□□□□□ -1.34
FAM60A-202ENST00000448582 JADE2Q9NQC1 790 aa6.65□□□□□ -1.34
FAM60A-202ENST00000448582 UGGT1Q9NYU2 1555 aa6.65□□□□□ -1.34
FAM60A-202ENST00000448582 PPP1R12AO14974 1030 aaPredicted RBP6.65□□□□□ -1.34
FAM60A-202ENST00000448582 PRPF3O43395 683 aaKnown RBP6.65□□□□□ -1.34
FAM60A-202ENST00000448582 CDKN1CP49918 316 aaPredicted RBP6.65□□□□□ -1.34
FAM60A-202ENST00000448582 XPCQ01831 940 aaPredicted RBP6.65□□□□□ -1.34
FAM60A-202ENST00000448582 PDGFDQ9GZP0 370 aaPredicted RBP6.65□□□□□ -1.34
FAM60A-202ENST00000448582 CGNQ9P2M7 1197 aaKnown RBP6.65□□□□□ -1.34
FAM60A-202ENST00000448582 WAPLQ7Z5K2 1190 aa6.65□□□□□ -1.35
FAM60A-202ENST00000448582 ERP27Q96DN0 273 aa6.65□□□□□ -1.35
FAM60A-202ENST00000448582 RAI14Q9P0K7 980 aa6.65□□□□□ -1.35
FAM60A-202ENST00000448582 PHF8Q9UPP1 1060 aa6.65□□□□□ -1.35
FAM60A-202ENST00000448582 CICQ96RK0 1608 aaPredicted RBP6.65□□□□□ -1.35
FAM60A-202ENST00000448582 ANKRD50Q9ULJ7 1429 aa6.64□□□□□ -1.35
FAM60A-202ENST00000448582 ARHGEF28Q8N1W1 1705 aaKnown RBP6.64□□□□□ -1.35
FAM60A-202ENST00000448582 CDC42BPBQ9Y5S2 1711 aa6.64□□□□□ -1.35
FAM60A-202ENST00000448582 SOWAHDA6NJG2 315 aa6.64□□□□□ -1.35
FAM60A-202ENST00000448582 CBFA2T2O43439 604 aa6.64□□□□□ -1.35
FAM60A-202ENST00000448582 SKILP12757 684 aa6.64□□□□□ -1.35
FAM60A-202ENST00000448582 GLULP15104 373 aa6.64□□□□□ -1.35
FAM60A-202ENST00000448582 INHBEP58166 350 aa6.64□□□□□ -1.35
FAM60A-202ENST00000448582 FERMT3Q86UX7 667 aa6.64□□□□□ -1.35
FAM60A-202ENST00000448582 LARP6Q9BRS8 491 aaKnown RBP6.64□□□□□ -1.35
FAM60A-202ENST00000448582 IFT122Q9HBG6 1241 aa6.64□□□□□ -1.35
FAM60A-202ENST00000448582 ARHGEF5Q12774 1597 aa6.64□□□□□ -1.35
FAM60A-202ENST00000448582 VAC14Q08AM6 782 aa6.64□□□□□ -1.35
FAM60A-202ENST00000448582 WASHC5Q12768 1159 aa6.64□□□□□ -1.35
FAM60A-202ENST00000448582 IFT88Q13099 833 aa6.64□□□□□ -1.35
FAM60A-202ENST00000448582 SMYD5Q6GMV2 418 aa6.64□□□□□ -1.35
FAM60A-202ENST00000448582 HDGFL2Q7Z4V5 671 aaPredicted RBP6.64□□□□□ -1.35
FAM60A-202ENST00000448582 SVIPQ8NHG7 77 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms