RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 GRAPLQ8TC17 118 aaPredicted RBP17.71■□□□□ 0.43
GTF3C3-206ENST00000448539 GPBP1L1Q9HC44 474 aaPredicted RBP17.71■□□□□ 0.43
GTF3C3-206ENST00000448539 ARFGEF1Q9Y6D6 1849 aa17.7■□□□□ 0.42
GTF3C3-206ENST00000448539 BBOX1O75936 387 aa17.7■□□□□ 0.42
GTF3C3-206ENST00000448539 CCT4P50991 539 aaKnown RBP17.7■□□□□ 0.42
GTF3C3-206ENST00000448539 CTSWP56202 376 aa17.7■□□□□ 0.42
GTF3C3-206ENST00000448539 CC2D2BQ6DHV5 1058 aa17.7■□□□□ 0.42
GTF3C3-206ENST00000448539 RTKN2Q8IZC4 609 aa17.69■□□□□ 0.42
GTF3C3-206ENST00000448539 C7orf43Q8WVR3 580 aa17.69■□□□□ 0.42
GTF3C3-206ENST00000448539 CCDC85AQ96PX6 553 aaPredicted RBP17.69■□□□□ 0.42
GTF3C3-206ENST00000448539 PLA2G12BQ9BX93 195 aa17.69■□□□□ 0.42
GTF3C3-206ENST00000448539 SLX4Q8IY92 1834 aa17.68■□□□□ 0.42
GTF3C3-206ENST00000448539 CASP7P55210 303 aa17.68■□□□□ 0.42
GTF3C3-206ENST00000448539 GRIPAP1Q4V328 841 aa17.68■□□□□ 0.42
GTF3C3-206ENST00000448539 ZKSCAN2Q63HK3 967 aa17.68■□□□□ 0.42
GTF3C3-206ENST00000448539 ATF7IPQ6VMQ6 1270 aa17.68■□□□□ 0.42
GTF3C3-206ENST00000448539 TMC4Q7Z404 712 aa17.68■□□□□ 0.42
GTF3C3-206ENST00000448539 DDX60Q8IY21 1712 aaKnown RBP17.68■□□□□ 0.42
GTF3C3-206ENST00000448539 TAOK3Q9H2K8 898 aa17.68■□□□□ 0.42
GTF3C3-206ENST00000448539 RASSF7Q02833 373 aa17.67■□□□□ 0.42
GTF3C3-206ENST00000448539 TTLL11Q8NHH1 800 aa17.67■□□□□ 0.42
GTF3C3-206ENST00000448539 ATP6V0A2Q9Y487 856 aa17.67■□□□□ 0.42
GTF3C3-206ENST00000448539 LAMB2P55268 1798 aa17.66■□□□□ 0.42
GTF3C3-206ENST00000448539 TRIM27P14373 513 aa17.66■□□□□ 0.42
GTF3C3-206ENST00000448539 RPS8P62241 208 aaKnown RBP17.66■□□□□ 0.42
GTF3C3-206ENST00000448539 OLFM4Q6UX06 510 aa17.66■□□□□ 0.42
GTF3C3-206ENST00000448539 CELF1Q92879 486 aaKnown RBP17.66■□□□□ 0.42
GTF3C3-206ENST00000448539 CDC5LQ99459 802 aaKnown RBP17.66■□□□□ 0.42
GTF3C3-206ENST00000448539 SEC31BQ9NQW1 1179 aa17.66■□□□□ 0.42
GTF3C3-206ENST00000448539 RNF181Q9P0P0 153 aa17.66■□□□□ 0.42
GTF3C3-206ENST00000448539 CHMP3Q9Y3E7 222 aa17.66■□□□□ 0.42
GTF3C3-206ENST00000448539 CACNA1SQ13698 1873 aa17.66■□□□□ 0.42
GTF3C3-206ENST00000448539 NFKBIEO00221 500 aa17.65■□□□□ 0.42
GTF3C3-206ENST00000448539 LMNB1P20700 586 aa17.65■□□□□ 0.42
GTF3C3-206ENST00000448539 FKBP4Q02790 459 aaKnown RBP eCLIP17.65■□□□□ 0.42
GTF3C3-206ENST00000448539 C9orf131Q5VYM1 1079 aa17.65■□□□□ 0.42
GTF3C3-206ENST00000448539 ANKRD18AQ8IVF6 992 aa17.65■□□□□ 0.42
GTF3C3-206ENST00000448539 SP8Q8IXZ3 490 aa17.65■□□□□ 0.42
GTF3C3-206ENST00000448539 CLUAP1Q96AJ1 413 aa17.65■□□□□ 0.42
GTF3C3-206ENST00000448539 RCAN3Q9UKA8 241 aa17.65■□□□□ 0.42
GTF3C3-206ENST00000448539 NBPF7P0C2Y1 421 aaPredicted RBP17.64■□□□□ 0.41
GTF3C3-206ENST00000448539 FTSJ3Q8IY81 847 aaKnown RBP17.64■□□□□ 0.41
GTF3C3-206ENST00000448539 GREM2Q9H772 168 aa17.64■□□□□ 0.41
GTF3C3-206ENST00000448539 HDAC5Q9UQL6 1122 aa17.64■□□□□ 0.41
GTF3C3-206ENST00000448539 UTYO14607 1347 aa17.64■□□□□ 0.41
GTF3C3-206ENST00000448539 LTBP3Q9NS15 1303 aa17.64■□□□□ 0.41
GTF3C3-206ENST00000448539 CSF1RP07333 972 aa17.63■□□□□ 0.41
GTF3C3-206ENST00000448539 IGHMBP2P38935 993 aaKnown RBP17.63■□□□□ 0.41
GTF3C3-206ENST00000448539 INTS3Q68E01 1043 aaKnown RBP17.63■□□□□ 0.41
GTF3C3-206ENST00000448539 SUCLG2Q96I99 432 aa17.63■□□□□ 0.41
GTF3C3-206ENST00000448539 USP44Q9H0E7 712 aa17.63■□□□□ 0.41
GTF3C3-206ENST00000448539 ANKRD18BA2A2Z9 1011 aa17.62■□□□□ 0.41
GTF3C3-206ENST00000448539 UBTFL1P0CB47 393 aaPredicted RBP17.62■□□□□ 0.41
GTF3C3-206ENST00000448539 ITGA6P23229 1130 aa17.62■□□□□ 0.41
GTF3C3-206ENST00000448539 FOXO4P98177 505 aa17.62■□□□□ 0.41
GTF3C3-206ENST00000448539 IFIT5Q13325 482 aaKnown RBP17.62■□□□□ 0.41
GTF3C3-206ENST00000448539 FAM161AQ3B820 660 aa17.62■□□□□ 0.41
GTF3C3-206ENST00000448539 LMBR1LQ6UX01 489 aa17.62■□□□□ 0.41
GTF3C3-206ENST00000448539 DPP8Q6V1X1 898 aaPredicted RBP17.62■□□□□ 0.41
GTF3C3-206ENST00000448539 MPNDQ8N594 471 aa17.62■□□□□ 0.41
GTF3C3-206ENST00000448539 PSMD1Q99460 953 aa17.62■□□□□ 0.41
GTF3C3-206ENST00000448539 RTL9Q8NET4 1388 aa17.62■□□□□ 0.41
GTF3C3-206ENST00000448539 CEP350Q5VT06 3117 aa17.62■□□□□ 0.41
GTF3C3-206ENST00000448539 KIF3CO14782 793 aa17.61■□□□□ 0.41
GTF3C3-206ENST00000448539 CCDC57Q2TAC2 916 aa17.61■□□□□ 0.41
GTF3C3-206ENST00000448539 TAF7LQ5H9L4 462 aa17.61■□□□□ 0.41
GTF3C3-206ENST00000448539 DZIP1LQ8IYY4 767 aaKnown RBP17.61■□□□□ 0.41
GTF3C3-206ENST00000448539 SUPT20HQ8NEM7 779 aa17.61■□□□□ 0.41
GTF3C3-206ENST00000448539 MPHOSPH8Q99549 860 aa17.61■□□□□ 0.41
GTF3C3-206ENST00000448539 ZNF277Q9NRM2 450 aaPredicted RBP17.61■□□□□ 0.41
GTF3C3-206ENST00000448539 MS4A1P11836 297 aa17.6■□□□□ 0.41
GTF3C3-206ENST00000448539 EPHA10Q5JZY3 1008 aa17.6■□□□□ 0.41
GTF3C3-206ENST00000448539 NSFL1CQ9UNZ2 370 aaKnown RBP17.6■□□□□ 0.41
GTF3C3-206ENST00000448539 TNNQ9UQP3 1299 aa17.6■□□□□ 0.41
GTF3C3-206ENST00000448539 GNAI3P08754 354 aa17.59■□□□□ 0.41
GTF3C3-206ENST00000448539 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.59■□□□□ 0.41
GTF3C3-206ENST00000448539 BICC1Q9H694 974 aaKnown RBP17.59■□□□□ 0.41
GTF3C3-206ENST00000448539 BSDC1Q9NW68 430 aaPredicted RBP17.59■□□□□ 0.41
GTF3C3-206ENST00000448539 ANKIB1Q9P2G1 1089 aa17.59■□□□□ 0.41
GTF3C3-206ENST00000448539 MYH3P11055 1940 aa17.59■□□□□ 0.41
GTF3C3-206ENST00000448539 IARSP41252 1262 aaKnown RBP17.58■□□□□ 0.4
GTF3C3-206ENST00000448539 SLC51AQ86UW1 340 aa17.58■□□□□ 0.4
GTF3C3-206ENST00000448539 TMEM57Q8N5G2 664 aa17.58■□□□□ 0.4
GTF3C3-206ENST00000448539 FER1L6Q2WGJ9 1857 aa17.58■□□□□ 0.4
GTF3C3-206ENST00000448539 ZC3H4Q9UPT8 1303 aaKnown RBP17.57■□□□□ 0.4
GTF3C3-206ENST00000448539 PRELPP51888 382 aa17.57■□□□□ 0.4
GTF3C3-206ENST00000448539 GPSM2P81274 684 aa17.57■□□□□ 0.4
GTF3C3-206ENST00000448539 ITPRIPQ8IWB1 547 aa17.57■□□□□ 0.4
GTF3C3-206ENST00000448539 JDP2Q8WYK2 163 aa17.57■□□□□ 0.4
GTF3C3-206ENST00000448539 KAZALD1Q96I82 304 aa17.57■□□□□ 0.4
GTF3C3-206ENST00000448539 MEIS3Q99687 375 aa17.57■□□□□ 0.4
GTF3C3-206ENST00000448539 VPS33BQ9H267 617 aa17.57■□□□□ 0.4
GTF3C3-206ENST00000448539 TAF1P21675 1872 aa17.56■□□□□ 0.4
GTF3C3-206ENST00000448539 C6orf229H3BNL8 230 aa17.56■□□□□ 0.4
GTF3C3-206ENST00000448539 PPIP5K2O43314 1243 aa17.56■□□□□ 0.4
GTF3C3-206ENST00000448539 RABL6Q3YEC7 729 aaPredicted RBP17.56■□□□□ 0.4
GTF3C3-206ENST00000448539 LARGE2Q8N3Y3 721 aa17.56■□□□□ 0.4
GTF3C3-206ENST00000448539 RTFDC1Q9BY42 306 aaPredicted RBP17.56■□□□□ 0.4
GTF3C3-206ENST00000448539 GGA1Q9UJY5 639 aa17.56■□□□□ 0.4
GTF3C3-206ENST00000448539 SBF1O95248 1867 aa17.56■□□□□ 0.4
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