RNA–Protein interactions for RNA: ENST00000448526.6

CDKN1A-204, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CDKN1A, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-204ENST00000448526 ISCA1Q9BUE6 129 aa20.51■□□□□ 0.87
CDKN1A-204ENST00000448526 CCDC9Q9Y3X0 531 aaKnown RBP20.51■□□□□ 0.87
CDKN1A-204ENST00000448526 TCHHQ07283 1943 aa20.51■□□□□ 0.87
CDKN1A-204ENST00000448526 TAF5LO75529 589 aa20.51■□□□□ 0.87
CDKN1A-204ENST00000448526 ZNF445P59923 1031 aa20.51■□□□□ 0.87
CDKN1A-204ENST00000448526 ST3GAL1Q11201 340 aa20.51■□□□□ 0.87
CDKN1A-204ENST00000448526 FOXD4L6Q3SYB3 417 aaPredicted RBP20.51■□□□□ 0.87
CDKN1A-204ENST00000448526 LRRC24Q50LG9 513 aa20.51■□□□□ 0.87
CDKN1A-204ENST00000448526 FOXD4L3Q6VB84 417 aaPredicted RBP20.51■□□□□ 0.87
CDKN1A-204ENST00000448526 ATG3Q9NT62 314 aa20.51■□□□□ 0.87
CDKN1A-204ENST00000448526 WDR33Q9C0J8 1336 aaKnown RBP20.5■□□□□ 0.87
CDKN1A-204ENST00000448526 ZNF330Q9Y3S2 320 aaPredicted RBP20.5■□□□□ 0.87
CDKN1A-204ENST00000448526 ZNF609O15014 1411 aa20.5■□□□□ 0.87
CDKN1A-204ENST00000448526 TIMM10P62072 90 aa20.5■□□□□ 0.87
CDKN1A-204ENST00000448526 CCDC83Q8IWF9 413 aa20.5■□□□□ 0.87
CDKN1A-204ENST00000448526 TCIRG1Q13488 830 aa20.49■□□□□ 0.87
CDKN1A-204ENST00000448526 SEC62Q99442 399 aaKnown RBP20.49■□□□□ 0.87
CDKN1A-204ENST00000448526 DDX46Q7L014 1031 aaKnown RBP20.48■□□□□ 0.87
CDKN1A-204ENST00000448526 PUS3Q9BZE2 481 aaKnown RBP20.48■□□□□ 0.87
CDKN1A-204ENST00000448526 TMEM63CQ9P1W3 806 aa20.48■□□□□ 0.87
CDKN1A-204ENST00000448526 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.48■□□□□ 0.87
CDKN1A-204ENST00000448526 DISP2A7MBM2 1401 aa20.48■□□□□ 0.87
CDKN1A-204ENST00000448526 ME3Q16798 604 aa20.48■□□□□ 0.87
CDKN1A-204ENST00000448526 CCDC129Q6ZRS4 1044 aa20.48■□□□□ 0.87
CDKN1A-204ENST00000448526 FAM43AQ8N2R8 423 aa20.48■□□□□ 0.87
CDKN1A-204ENST00000448526 NEUROD6Q96NK8 337 aa20.48■□□□□ 0.87
CDKN1A-204ENST00000448526 GDPD2Q9HCC8 539 aa20.48■□□□□ 0.87
CDKN1A-204ENST00000448526 SMC3Q9UQE7 1217 aa20.48■□□□□ 0.87
CDKN1A-204ENST00000448526 EYA2O00167 538 aa20.47■□□□□ 0.87
CDKN1A-204ENST00000448526 SYT1P21579 422 aa20.47■□□□□ 0.87
CDKN1A-204ENST00000448526 IL15P40933 162 aaPredicted RBP20.47■□□□□ 0.87
CDKN1A-204ENST00000448526 TPCN1Q9ULQ1 816 aa20.47■□□□□ 0.87
CDKN1A-204ENST00000448526 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.47■□□□□ 0.87
CDKN1A-204ENST00000448526 VSIG10Q8N0Z9 540 aa20.47■□□□□ 0.87
CDKN1A-204ENST00000448526 ZSCAN31Q96LW9 406 aaPredicted RBP20.47■□□□□ 0.87
CDKN1A-204ENST00000448526 TCEANC2Q96MN5 208 aa20.47■□□□□ 0.87
CDKN1A-204ENST00000448526 GPR108Q9NPR9 543 aa20.47■□□□□ 0.87
CDKN1A-204ENST00000448526 KAT6BQ8WYB5 2073 aa20.47■□□□□ 0.87
CDKN1A-204ENST00000448526 RFX7Q2KHR2 1363 aa20.46■□□□□ 0.87
CDKN1A-204ENST00000448526 USPL1Q5W0Q7 1092 aa20.46■□□□□ 0.87
CDKN1A-204ENST00000448526 NECAB1Q8N987 351 aa20.46■□□□□ 0.87
CDKN1A-204ENST00000448526 STX6O43752 255 aa20.45■□□□□ 0.86
CDKN1A-204ENST00000448526 ZSCAN22P10073 491 aaPredicted RBP20.45■□□□□ 0.86
CDKN1A-204ENST00000448526 SLFNL1Q499Z3 407 aa20.45■□□□□ 0.86
CDKN1A-204ENST00000448526 RNF20Q5VTR2 975 aa20.45■□□□□ 0.86
CDKN1A-204ENST00000448526 SLC4A9Q96Q91 983 aa20.45■□□□□ 0.86
CDKN1A-204ENST00000448526 SH2B1Q9NRF2 756 aaPredicted RBP20.45■□□□□ 0.86
CDKN1A-204ENST00000448526 PSMA5P28066 241 aa20.45■□□□□ 0.86
CDKN1A-204ENST00000448526 GJB2P29033 226 aa20.45■□□□□ 0.86
CDKN1A-204ENST00000448526 KBTBD3Q8NAB2 608 aa20.45■□□□□ 0.86
CDKN1A-204ENST00000448526 RRAGDQ9NQL2 400 aaPredicted RBP20.45■□□□□ 0.86
CDKN1A-204ENST00000448526 COL14A1Q05707 1796 aaKnown RBP20.45■□□□□ 0.86
CDKN1A-204ENST00000448526 GADD45BO75293 160 aaPredicted RBP20.44■□□□□ 0.86
CDKN1A-204ENST00000448526 TRIM28Q13263 835 aaKnown RBP20.44■□□□□ 0.86
CDKN1A-204ENST00000448526 TSGA10IPQ3SY00 556 aa20.44■□□□□ 0.86
CDKN1A-204ENST00000448526 BLOC1S2Q6QNY1 142 aa20.44■□□□□ 0.86
CDKN1A-204ENST00000448526 TEX13AQ9BXU3 409 aaPredicted RBP20.44■□□□□ 0.86
CDKN1A-204ENST00000448526 CIAO1O76071 339 aa20.44■□□□□ 0.86
CDKN1A-204ENST00000448526 RPS6KB1P23443 525 aa20.44■□□□□ 0.86
CDKN1A-204ENST00000448526 USP48Q86UV5 1035 aa20.44■□□□□ 0.86
CDKN1A-204ENST00000448526 FAM89AQ96GI7 184 aa20.44■□□□□ 0.86
CDKN1A-204ENST00000448526 A0A1B0GUL7 405 aa20.43■□□□□ 0.86
CDKN1A-204ENST00000448526 GOLIM4O00461 696 aa20.43■□□□□ 0.86
CDKN1A-204ENST00000448526 PRIM1P49642 420 aaKnown RBP20.43■□□□□ 0.86
CDKN1A-204ENST00000448526 MCMDC2Q4G0Z9 681 aa20.43■□□□□ 0.86
CDKN1A-204ENST00000448526 SYNE4Q8N205 404 aa20.43■□□□□ 0.86
CDKN1A-204ENST00000448526 HMG20BQ9P0W2 317 aa20.43■□□□□ 0.86
CDKN1A-204ENST00000448526 BCL9O00512 1426 aa20.43■□□□□ 0.86
CDKN1A-204ENST00000448526 COL16A1Q07092 1604 aaPredicted RBP20.43■□□□□ 0.86
CDKN1A-204ENST00000448526 STARD3NLO95772 234 aa20.42■□□□□ 0.86
CDKN1A-204ENST00000448526 MBD3O95983 291 aa20.42■□□□□ 0.86
CDKN1A-204ENST00000448526 TOB2Q14106 344 aaPredicted RBP20.42■□□□□ 0.86
CDKN1A-204ENST00000448526 HLFQ16534 295 aa20.42■□□□□ 0.86
CDKN1A-204ENST00000448526 KIF6Q6ZMV9 814 aa20.42■□□□□ 0.86
CDKN1A-204ENST00000448526 CCDC85AQ96PX6 553 aaPredicted RBP20.42■□□□□ 0.86
CDKN1A-204ENST00000448526 PAG1Q9NWQ8 432 aa20.42■□□□□ 0.86
CDKN1A-204ENST00000448526 PALLDQ8WX93 1383 aa20.42■□□□□ 0.86
CDKN1A-204ENST00000448526 PCCAP05165 728 aaPredicted RBP20.42■□□□□ 0.86
CDKN1A-204ENST00000448526 MAP3K15Q6ZN16 1313 aa20.42■□□□□ 0.86
CDKN1A-204ENST00000448526 ROBO1Q9Y6N7 1651 aa20.42■□□□□ 0.86
CDKN1A-204ENST00000448526 F13A1P00488 732 aa20.41■□□□□ 0.86
CDKN1A-204ENST00000448526 NASPP49321 788 aaPredicted RBP20.41■□□□□ 0.86
CDKN1A-204ENST00000448526 RBSNQ9H1K0 784 aa20.41■□□□□ 0.86
CDKN1A-204ENST00000448526 CNPY2Q9Y2B0 182 aa20.41■□□□□ 0.86
CDKN1A-204ENST00000448526 CCDC57Q2TAC2 916 aa20.41■□□□□ 0.86
CDKN1A-204ENST00000448526 ALDH8A1Q9H2A2 487 aaPredicted RBP20.41■□□□□ 0.86
CDKN1A-204ENST00000448526 MTMR6Q9Y217 621 aa20.41■□□□□ 0.86
CDKN1A-204ENST00000448526 SH3TC1Q8TE82 1336 aa20.4■□□□□ 0.86
CDKN1A-204ENST00000448526 CYP19A1P11511 503 aaPredicted RBP20.4■□□□□ 0.86
CDKN1A-204ENST00000448526 GIGYF2Q6Y7W6 1299 aaKnown RBP20.4■□□□□ 0.86
CDKN1A-204ENST00000448526 SYCE3A1L190 88 aa20.39■□□□□ 0.86
CDKN1A-204ENST00000448526 CYP21A2P08686 494 aa20.39■□□□□ 0.86
CDKN1A-204ENST00000448526 ZBTB38Q8NAP3 1195 aaPredicted RBP20.39■□□□□ 0.86
CDKN1A-204ENST00000448526 PLA2G12BQ9BX93 195 aa20.39■□□□□ 0.86
CDKN1A-204ENST00000448526 CSF1RP07333 972 aa20.39■□□□□ 0.85
CDKN1A-204ENST00000448526 IFIT1P09914 478 aaKnown RBP20.39■□□□□ 0.85
CDKN1A-204ENST00000448526 GPTP24298 496 aa20.39■□□□□ 0.85
CDKN1A-204ENST00000448526 TMEM87AQ8NBN3 555 aa20.39■□□□□ 0.85
CDKN1A-204ENST00000448526 CEP126Q9P2H0 1117 aa20.39■□□□□ 0.85
CDKN1A-204ENST00000448526 U3KPZ7 1027 aaPredicted RBP20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms