RNA–Protein interactions for RNA: ENST00000448301.6

CTSS-202, Transcript of cathepsin S, humanhuman

TSL 2 BASIC

Gene CTSS, Length 1,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSS-202ENST00000448301 UBTFL1P0CB47 393 aaPredicted RBP17.64■□□□□ 0.42
CTSS-202ENST00000448301 SRGNP10124 158 aa17.64■□□□□ 0.42
CTSS-202ENST00000448301 TAF1P21675 1872 aa17.64■□□□□ 0.42
CTSS-202ENST00000448301 CTSWP56202 376 aa17.64■□□□□ 0.42
CTSS-202ENST00000448301 NLGN2Q8NFZ4 835 aa17.64■□□□□ 0.42
CTSS-202ENST00000448301 SUCLG2Q96I99 432 aa17.64■□□□□ 0.42
CTSS-202ENST00000448301 HDAC5Q9UQL6 1122 aa17.64■□□□□ 0.42
CTSS-202ENST00000448301 COG6Q9Y2V7 657 aa17.64■□□□□ 0.42
CTSS-202ENST00000448301 ARFGEF1Q9Y6D6 1849 aa17.64■□□□□ 0.41
CTSS-202ENST00000448301 ZBTB7BO15156 539 aaPredicted RBP17.64■□□□□ 0.41
CTSS-202ENST00000448301 DPEP1P16444 411 aa17.64■□□□□ 0.41
CTSS-202ENST00000448301 CHRNA5P30532 468 aa17.64■□□□□ 0.41
CTSS-202ENST00000448301 MASTLQ96GX5 879 aa17.64■□□□□ 0.41
CTSS-202ENST00000448301 KAZALD1Q96I82 304 aa17.64■□□□□ 0.41
CTSS-202ENST00000448301 SPEF2Q9C093 1822 aa17.63■□□□□ 0.41
CTSS-202ENST00000448301 A0A0G2JLW4 131 aa17.63■□□□□ 0.41
CTSS-202ENST00000448301 NPR1P16066 1061 aa17.63■□□□□ 0.41
CTSS-202ENST00000448301 KCNA3P22001 575 aa17.63■□□□□ 0.41
CTSS-202ENST00000448301 HOXA10P31260 410 aaPredicted RBP17.63■□□□□ 0.41
CTSS-202ENST00000448301 FOXO4P98177 505 aa17.63■□□□□ 0.41
CTSS-202ENST00000448301 STYK1Q6J9G0 422 aa17.63■□□□□ 0.41
CTSS-202ENST00000448301 RPGRQ92834 1020 aaKnown RBP17.63■□□□□ 0.41
CTSS-202ENST00000448301 RTL9Q8NET4 1388 aa17.62■□□□□ 0.41
CTSS-202ENST00000448301 CSF1RP07333 972 aa17.62■□□□□ 0.41
CTSS-202ENST00000448301 CCDC152Q4G0S7 254 aa17.62■□□□□ 0.41
CTSS-202ENST00000448301 TTLL11Q8NHH1 800 aa17.62■□□□□ 0.41
CTSS-202ENST00000448301 CHMP4BQ9H444 224 aaKnown RBP17.62■□□□□ 0.41
CTSS-202ENST00000448301 SLX4Q8IY92 1834 aa17.62■□□□□ 0.41
CTSS-202ENST00000448301 RABL6Q3YEC7 729 aaPredicted RBP17.61■□□□□ 0.41
CTSS-202ENST00000448301 EPHA10Q5JZY3 1008 aa17.61■□□□□ 0.41
CTSS-202ENST00000448301 RBM17Q96I25 401 aaKnown RBP17.61■□□□□ 0.41
CTSS-202ENST00000448301 BICC1Q9H694 974 aaKnown RBP17.61■□□□□ 0.41
CTSS-202ENST00000448301 GNAI2P04899 355 aa17.6■□□□□ 0.41
CTSS-202ENST00000448301 ALDH1B1P30837 517 aa17.6■□□□□ 0.41
CTSS-202ENST00000448301 DDX46Q7L014 1031 aaKnown RBP17.6■□□□□ 0.41
CTSS-202ENST00000448301 CNKSR1Q969H4 720 aa17.6■□□□□ 0.41
CTSS-202ENST00000448301 ZNF622Q969S3 477 aaKnown RBP eCLIP17.6■□□□□ 0.41
CTSS-202ENST00000448301 CRAMP1Q96RY5 1269 aa17.6■□□□□ 0.41
CTSS-202ENST00000448301 PIM2Q9P1W9 311 aa17.6■□□□□ 0.41
CTSS-202ENST00000448301 LRRFIP2Q9Y608 721 aaKnown RBP17.6■□□□□ 0.41
CTSS-202ENST00000448301 COL4A1P02462 1669 aa17.6■□□□□ 0.41
CTSS-202ENST00000448301 LRRC37AA6NMS7 1700 aa17.6■□□□□ 0.41
CTSS-202ENST00000448301 LMBR1LQ6UX01 489 aa17.59■□□□□ 0.41
CTSS-202ENST00000448301 ANKRD44Q8N8A2 993 aa17.59■□□□□ 0.41
CTSS-202ENST00000448301 FAM161AQ3B820 660 aa17.58■□□□□ 0.41
CTSS-202ENST00000448301 GREM2Q9H772 168 aa17.58■□□□□ 0.41
CTSS-202ENST00000448301 GRAPQ13588 217 aa17.57■□□□□ 0.4
CTSS-202ENST00000448301 TTLL6Q8N841 843 aa17.57■□□□□ 0.4
CTSS-202ENST00000448301 GRAPLQ8TC17 118 aaPredicted RBP17.57■□□□□ 0.4
CTSS-202ENST00000448301 CCDC85AQ96PX6 553 aaPredicted RBP17.57■□□□□ 0.4
CTSS-202ENST00000448301 ZBTB40Q9NUA8 1239 aa17.57■□□□□ 0.4
CTSS-202ENST00000448301 ITGA6P23229 1130 aa17.56■□□□□ 0.4
CTSS-202ENST00000448301 CRBNQ96SW2 442 aa17.56■□□□□ 0.4
CTSS-202ENST00000448301 SEC31BQ9NQW1 1179 aa17.56■□□□□ 0.4
CTSS-202ENST00000448301 CHMP3Q9Y3E7 222 aa17.56■□□□□ 0.4
CTSS-202ENST00000448301 A0A1B0GUL6 1792 aa17.56■□□□□ 0.4
CTSS-202ENST00000448301 MTX1Q13505 466 aa17.55■□□□□ 0.4
CTSS-202ENST00000448301 DALRD3Q5D0E6 543 aaKnown RBP17.55■□□□□ 0.4
CTSS-202ENST00000448301 PRPF40BQ6NWY9 871 aaKnown RBP17.55■□□□□ 0.4
CTSS-202ENST00000448301 CDC5LQ99459 802 aaKnown RBP17.55■□□□□ 0.4
CTSS-202ENST00000448301 ANKRD18BA2A2Z9 1011 aa17.55■□□□□ 0.4
CTSS-202ENST00000448301 IFIT5Q13325 482 aaKnown RBP17.55■□□□□ 0.4
CTSS-202ENST00000448301 CCDC57Q2TAC2 916 aa17.55■□□□□ 0.4
CTSS-202ENST00000448301 CELF1Q92879 486 aaKnown RBP17.55■□□□□ 0.4
CTSS-202ENST00000448301 C1orf115Q9H7X2 142 aa17.55■□□□□ 0.4
CTSS-202ENST00000448301 GOLGB1Q14789 3259 aaKnown RBP17.55■□□□□ 0.4
CTSS-202ENST00000448301 FER1L6Q2WGJ9 1857 aa17.54■□□□□ 0.4
CTSS-202ENST00000448301 BBOX1O75936 387 aa17.54■□□□□ 0.4
CTSS-202ENST00000448301 TMC4Q7Z404 712 aa17.54■□□□□ 0.4
CTSS-202ENST00000448301 PPEF1O14829 653 aaPredicted RBP17.53■□□□□ 0.4
CTSS-202ENST00000448301 RPS8P62241 208 aaKnown RBP17.53■□□□□ 0.4
CTSS-202ENST00000448301 ANKRD18AQ8IVF6 992 aa17.53■□□□□ 0.4
CTSS-202ENST00000448301 BCS1LQ9Y276 419 aa17.53■□□□□ 0.4
CTSS-202ENST00000448301 AAMPQ13685 434 aa17.52■□□□□ 0.4
CTSS-202ENST00000448301 WWC3Q9ULE0 1092 aa17.52■□□□□ 0.4
CTSS-202ENST00000448301 LTBP1Q14766 1721 aa17.52■□□□□ 0.39
CTSS-202ENST00000448301 SRGAP3O43295 1099 aa17.51■□□□□ 0.39
CTSS-202ENST00000448301 IGHMBP2P38935 993 aaKnown RBP17.51■□□□□ 0.39
CTSS-202ENST00000448301 RFX5P48382 616 aaPredicted RBP17.51■□□□□ 0.39
CTSS-202ENST00000448301 CEP85Q6P2H3 762 aa17.51■□□□□ 0.39
CTSS-202ENST00000448301 C7orf43Q8WVR3 580 aa17.51■□□□□ 0.39
CTSS-202ENST00000448301 ATP6V0A2Q9Y487 856 aa17.51■□□□□ 0.39
CTSS-202ENST00000448301 ATP8B2P98198 1209 aa17.5■□□□□ 0.39
CTSS-202ENST00000448301 TAF7LQ5H9L4 462 aa17.5■□□□□ 0.39
CTSS-202ENST00000448301 SOGA3Q5TF21 947 aa17.5■□□□□ 0.39
CTSS-202ENST00000448301 RPAP2Q8IXW5 612 aaPredicted RBP17.5■□□□□ 0.39
CTSS-202ENST00000448301 SP8Q8IXZ3 490 aa17.5■□□□□ 0.39
CTSS-202ENST00000448301 BSDC1Q9NW68 430 aaPredicted RBP17.5■□□□□ 0.39
CTSS-202ENST00000448301 SNED1Q8TER0 1413 aa17.5■□□□□ 0.39
CTSS-202ENST00000448301 PNMA6EA0A0J9YXQ4 647 aa17.49■□□□□ 0.39
CTSS-202ENST00000448301 C21orf2O43822 256 aa17.49■□□□□ 0.39
CTSS-202ENST00000448301 YBX3P16989 372 aaKnown RBP eCLIP17.49■□□□□ 0.39
CTSS-202ENST00000448301 CC2D2BQ6DHV5 1058 aa17.49■□□□□ 0.39
CTSS-202ENST00000448301 EXOC6Q8TAG9 804 aa17.49■□□□□ 0.39
CTSS-202ENST00000448301 SSH3Q8TE77 659 aa17.49■□□□□ 0.39
CTSS-202ENST00000448301 ZNF594Q96JF6 807 aaPredicted RBP17.49■□□□□ 0.39
CTSS-202ENST00000448301 MPHOSPH8Q99549 860 aa17.49■□□□□ 0.39
CTSS-202ENST00000448301 IRX6P78412 446 aaPredicted RBP17.48■□□□□ 0.39
CTSS-202ENST00000448301 PTPN12Q05209 780 aaKnown RBP17.48■□□□□ 0.39
CTSS-202ENST00000448301 POLA2Q14181 598 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms