RNA–Protein interactions for RNA: ENST00000447872.5

VSTM1-206, Transcript of V-set and transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene VSTM1, Length 1,041 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1-206ENST00000447872 LAMB4A4D0S4 1761 aa13.48□□□□□ -0.25
VSTM1-206ENST00000447872 HOXB7P09629 217 aa13.48□□□□□ -0.25
VSTM1-206ENST00000447872 SCNN1DP51172 638 aa13.48□□□□□ -0.25
VSTM1-206ENST00000447872 DEFB115Q30KQ5 88 aa13.48□□□□□ -0.25
VSTM1-206ENST00000447872 HDGFL1Q5TGJ6 251 aa13.48□□□□□ -0.25
VSTM1-206ENST00000447872 USP50Q70EL3 339 aaPredicted RBP13.48□□□□□ -0.25
VSTM1-206ENST00000447872 MPNDQ8N594 471 aa13.48□□□□□ -0.25
VSTM1-206ENST00000447872 PLBD2Q8NHP8 589 aa13.48□□□□□ -0.25
VSTM1-206ENST00000447872 RTFDC1Q9BY42 306 aaPredicted RBP13.48□□□□□ -0.25
VSTM1-206ENST00000447872 DBF4Q9UBU7 674 aaPredicted RBP13.48□□□□□ -0.25
VSTM1-206ENST00000447872 ZNRF3Q9ULT6 936 aa13.48□□□□□ -0.25
VSTM1-206ENST00000447872 CCDC184Q52MB2 194 aa13.47□□□□□ -0.25
VSTM1-206ENST00000447872 ANKRD13DQ6ZTN6 518 aa13.47□□□□□ -0.25
VSTM1-206ENST00000447872 ABT1Q9ULW3 272 aaKnown RBP13.47□□□□□ -0.25
VSTM1-206ENST00000447872 RASSF10A6NK89 507 aa13.46□□□□□ -0.25
VSTM1-206ENST00000447872 CXCL9Q07325 125 aa13.46□□□□□ -0.25
VSTM1-206ENST00000447872 GRAPQ13588 217 aa13.46□□□□□ -0.25
VSTM1-206ENST00000447872 TMC4Q7Z404 712 aa13.46□□□□□ -0.25
VSTM1-206ENST00000447872 GRAPLQ8TC17 118 aaPredicted RBP13.46□□□□□ -0.25
VSTM1-206ENST00000447872 CFAP44Q96MT7 982 aa13.46□□□□□ -0.25
VSTM1-206ENST00000447872 ADARB2Q9NS39 739 aaKnown RBP13.46□□□□□ -0.25
VSTM1-206ENST00000447872 HYPKQ9NX55 129 aa13.46□□□□□ -0.25
VSTM1-206ENST00000447872 GPRC5DQ9NZD1 345 aa13.46□□□□□ -0.25
VSTM1-206ENST00000447872 KIAA2012Q0VF49 1180 aa13.45□□□□□ -0.26
VSTM1-206ENST00000447872 TNIP1Q15025 636 aa13.45□□□□□ -0.26
VSTM1-206ENST00000447872 DUSP27Q5VZP5 1158 aa13.45□□□□□ -0.26
VSTM1-206ENST00000447872 ZNF428Q96B54 188 aa13.45□□□□□ -0.26
VSTM1-206ENST00000447872 SCN4AP35499 1836 aa13.45□□□□□ -0.26
VSTM1-206ENST00000447872 COL4A5P29400 1685 aa13.44□□□□□ -0.26
VSTM1-206ENST00000447872 ATP5J2-PTCD1G3V325 749 aa13.44□□□□□ -0.26
VSTM1-206ENST00000447872 GMPSP49915 693 aaPredicted RBP13.44□□□□□ -0.26
VSTM1-206ENST00000447872 HNRNPUQ00839 825 aaKnown RBP eCLIP13.44□□□□□ -0.26
VSTM1-206ENST00000447872 CIAPIN1Q6FI81 312 aa13.44□□□□□ -0.26
VSTM1-206ENST00000447872 FAM89AQ96GI7 184 aa13.44□□□□□ -0.26
VSTM1-206ENST00000447872 ISCA1Q9BUE6 129 aa13.44□□□□□ -0.26
VSTM1-206ENST00000447872 WBP1LQ9NX94 342 aa13.44□□□□□ -0.26
VSTM1-206ENST00000447872 DLG5Q8TDM6 1919 aa13.44□□□□□ -0.26
VSTM1-206ENST00000447872 CACNA1SQ13698 1873 aa13.44□□□□□ -0.26
VSTM1-206ENST00000447872 WDR33Q9C0J8 1336 aaKnown RBP13.43□□□□□ -0.26
VSTM1-206ENST00000447872 RAD17O75943 681 aa13.43□□□□□ -0.26
VSTM1-206ENST00000447872 MAP2K1Q02750 393 aaPredicted RBP13.43□□□□□ -0.26
VSTM1-206ENST00000447872 CALD1Q05682 793 aaKnown RBP13.43□□□□□ -0.26
VSTM1-206ENST00000447872 BCL2L13Q9BXK5 485 aa13.43□□□□□ -0.26
VSTM1-206ENST00000447872 MRS2Q9HD23 443 aa13.43□□□□□ -0.26
VSTM1-206ENST00000447872 MBIPQ9NS73 344 aa13.43□□□□□ -0.26
VSTM1-206ENST00000447872 NUP98P52948 1817 aa13.42□□□□□ -0.26
VSTM1-206ENST00000447872 TRAF5O00463 557 aa13.42□□□□□ -0.26
VSTM1-206ENST00000447872 HSPA8P11142 646 aaKnown RBP13.42□□□□□ -0.26
VSTM1-206ENST00000447872 FMR1Q06787 632 aaKnown RBP eCLIP13.42□□□□□ -0.26
VSTM1-206ENST00000447872 TRIM28Q13263 835 aaKnown RBP13.42□□□□□ -0.26
VSTM1-206ENST00000447872 SF3B3Q15393 1217 aaKnown RBP13.42□□□□□ -0.26
VSTM1-206ENST00000447872 CST9Q5W186 159 aa13.42□□□□□ -0.26
VSTM1-206ENST00000447872 PAXIP1Q6ZW49 1069 aaPredicted RBP13.42□□□□□ -0.26
VSTM1-206ENST00000447872 NSFL1CQ9UNZ2 370 aaKnown RBP13.42□□□□□ -0.26
VSTM1-206ENST00000447872 CDHR2Q9BYE9 1310 aa13.41□□□□□ -0.26
VSTM1-206ENST00000447872 IRS4O14654 1257 aaPredicted RBP13.41□□□□□ -0.26
VSTM1-206ENST00000447872 APAF1O14727 1248 aa13.41□□□□□ -0.26
VSTM1-206ENST00000447872 HSP90B1P14625 803 aaKnown RBP13.41□□□□□ -0.26
VSTM1-206ENST00000447872 ECE1P42892 770 aa13.41□□□□□ -0.26
VSTM1-206ENST00000447872 WASHC4Q2M389 1173 aa13.41□□□□□ -0.26
VSTM1-206ENST00000447872 RTL5Q5HYW3 569 aaPredicted RBP13.41□□□□□ -0.26
VSTM1-206ENST00000447872 RIC3Q7Z5B4 369 aa13.41□□□□□ -0.26
VSTM1-206ENST00000447872 ZC3H15Q8WU90 426 aaKnown RBP13.41□□□□□ -0.26
VSTM1-206ENST00000447872 IFT57Q9NWB7 429 aa13.41□□□□□ -0.26
VSTM1-206ENST00000447872 C6orf229H3BNL8 230 aa13.4□□□□□ -0.26
VSTM1-206ENST00000447872 H7C1D1 291 aa13.4□□□□□ -0.26
VSTM1-206ENST00000447872 ZNF853P0CG23 659 aa13.4□□□□□ -0.26
VSTM1-206ENST00000447872 GNAI1P63096 354 aa13.4□□□□□ -0.26
VSTM1-206ENST00000447872 GOLGA2Q08379 1002 aa13.4□□□□□ -0.26
VSTM1-206ENST00000447872 PRPF38BQ5VTL8 546 aaKnown RBP13.4□□□□□ -0.26
VSTM1-206ENST00000447872 CAPNS2Q96L46 248 aa13.4□□□□□ -0.26
VSTM1-206ENST00000447872 GPR101Q96P66 508 aaPredicted RBP13.4□□□□□ -0.26
VSTM1-206ENST00000447872 CHMP4AQ9BY43 222 aa13.4□□□□□ -0.26
VSTM1-206ENST00000447872 CNOT7Q9UIV1 285 aaKnown RBP13.4□□□□□ -0.26
VSTM1-206ENST00000447872 YDJCA8MPS7 323 aa13.39□□□□□ -0.27
VSTM1-206ENST00000447872 ELL2O00472 640 aaPredicted RBP13.39□□□□□ -0.27
VSTM1-206ENST00000447872 RPS8P62241 208 aaKnown RBP13.39□□□□□ -0.27
VSTM1-206ENST00000447872 GRM1Q13255 1194 aa13.39□□□□□ -0.27
VSTM1-206ENST00000447872 ZBTB38Q8NAP3 1195 aaPredicted RBP13.39□□□□□ -0.27
VSTM1-206ENST00000447872 CELF1Q92879 486 aaKnown RBP13.39□□□□□ -0.27
VSTM1-206ENST00000447872 BEGAINQ9BUH8 593 aa13.39□□□□□ -0.27
VSTM1-206ENST00000447872 PGAP2Q9UHJ9 254 aa13.39□□□□□ -0.27
VSTM1-206ENST00000447872 TLL2Q9Y6L7 1015 aa13.39□□□□□ -0.27
VSTM1-206ENST00000447872 ADAMTSL1Q8N6G6 1762 aa13.39□□□□□ -0.27
VSTM1-206ENST00000447872 RIMBP2O15034 1052 aa13.38□□□□□ -0.27
VSTM1-206ENST00000447872 CELF2O95319 508 aaKnown RBP13.38□□□□□ -0.27
VSTM1-206ENST00000447872 GPSM2P81274 684 aa13.38□□□□□ -0.27
VSTM1-206ENST00000447872 CYP4F22Q6NT55 531 aa13.38□□□□□ -0.27
VSTM1-206ENST00000447872 CDC37L1Q7L3B6 337 aa13.38□□□□□ -0.27
VSTM1-206ENST00000447872 DPF2Q92785 391 aa13.38□□□□□ -0.27
VSTM1-206ENST00000447872 EYA3Q99504 573 aa13.38□□□□□ -0.27
VSTM1-206ENST00000447872 GLIS2Q9BZE0 524 aaPredicted RBP13.38□□□□□ -0.27
VSTM1-206ENST00000447872 NEFLP07196 543 aa13.37□□□□□ -0.27
VSTM1-206ENST00000447872 HIRAP54198 1017 aaPredicted RBP13.37□□□□□ -0.27
VSTM1-206ENST00000447872 MICALL2Q8IY33 904 aa13.37□□□□□ -0.27
VSTM1-206ENST00000447872 FAM9BQ8IZU0 186 aa13.37□□□□□ -0.27
VSTM1-206ENST00000447872 CCDC191Q8NCU4 936 aa13.37□□□□□ -0.27
VSTM1-206ENST00000447872 PHAXQ9H814 394 aaKnown RBP13.37□□□□□ -0.27
VSTM1-206ENST00000447872 DBNDD1Q9H9R9 158 aa13.37□□□□□ -0.27
VSTM1-206ENST00000447872 POLLQ9UGP5 575 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms