RNA–Protein interactions for RNA: ENST00000447683.2

OTUB1-204, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 2

Gene OTUB1, Length 2,315 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-204ENST00000447683 EDC3Q96F86 508 aaKnown RBP19.52■□□□□ 0.72
OTUB1-204ENST00000447683 TEX13AQ9BXU3 409 aaPredicted RBP19.52■□□□□ 0.71
OTUB1-204ENST00000447683 SH2B1Q9NRF2 756 aaPredicted RBP19.52■□□□□ 0.71
OTUB1-204ENST00000447683 ATG3Q9NT62 314 aa19.52■□□□□ 0.71
OTUB1-204ENST00000447683 COL14A1Q05707 1796 aaKnown RBP19.51■□□□□ 0.71
OTUB1-204ENST00000447683 KCNJ4P48050 445 aa19.51■□□□□ 0.71
OTUB1-204ENST00000447683 PDE4CQ08493 712 aa19.51■□□□□ 0.71
OTUB1-204ENST00000447683 ZSCAN23Q3MJ62 389 aa19.51■□□□□ 0.71
OTUB1-204ENST00000447683 TSGA10IPQ3SY00 556 aa19.51■□□□□ 0.71
OTUB1-204ENST00000447683 ZNF589Q86UQ0 364 aaPredicted RBP19.51■□□□□ 0.71
OTUB1-204ENST00000447683 DISP2A7MBM2 1401 aa19.51■□□□□ 0.71
OTUB1-204ENST00000447683 LARGE1O95461 756 aa19.51■□□□□ 0.71
OTUB1-204ENST00000447683 NCLP19338 710 aaKnown RBP19.51■□□□□ 0.71
OTUB1-204ENST00000447683 RNF20Q5VTR2 975 aa19.51■□□□□ 0.71
OTUB1-204ENST00000447683 CHMP3Q9Y3E7 222 aa19.51■□□□□ 0.71
OTUB1-204ENST00000447683 TAF5LO75529 589 aa19.5■□□□□ 0.71
OTUB1-204ENST00000447683 PSMA5P28066 241 aa19.5■□□□□ 0.71
OTUB1-204ENST00000447683 IL15P40933 162 aaPredicted RBP19.5■□□□□ 0.71
OTUB1-204ENST00000447683 USPL1Q5W0Q7 1092 aa19.5■□□□□ 0.71
OTUB1-204ENST00000447683 LARP6Q9BRS8 491 aaKnown RBP19.5■□□□□ 0.71
OTUB1-204ENST00000447683 MBD3O95983 291 aa19.5■□□□□ 0.71
OTUB1-204ENST00000447683 TRIM28Q13263 835 aaKnown RBP19.5■□□□□ 0.71
OTUB1-204ENST00000447683 TCIRG1Q13488 830 aa19.5■□□□□ 0.71
OTUB1-204ENST00000447683 PIGBQ92521 554 aa19.5■□□□□ 0.71
OTUB1-204ENST00000447683 ALDH8A1Q9H2A2 487 aaPredicted RBP19.5■□□□□ 0.71
OTUB1-204ENST00000447683 BTG4Q9NY30 223 aa19.5■□□□□ 0.71
OTUB1-204ENST00000447683 HMG20BQ9P0W2 317 aa19.5■□□□□ 0.71
OTUB1-204ENST00000447683 ASAP1Q9ULH1 1129 aa19.49■□□□□ 0.71
OTUB1-204ENST00000447683 EYA2O00167 538 aa19.48■□□□□ 0.71
OTUB1-204ENST00000447683 CIAO1O76071 339 aa19.48■□□□□ 0.71
OTUB1-204ENST00000447683 TICAM2Q86XR7 235 aa19.48■□□□□ 0.71
OTUB1-204ENST00000447683 SMC3Q9UQE7 1217 aa19.48■□□□□ 0.71
OTUB1-204ENST00000447683 PLCH1Q4KWH8 1693 aa19.48■□□□□ 0.71
OTUB1-204ENST00000447683 ZNF609O15014 1411 aa19.48■□□□□ 0.71
OTUB1-204ENST00000447683 RBM10P98175 930 aaKnown RBP19.48■□□□□ 0.71
OTUB1-204ENST00000447683 LRP6O75581 1613 aa19.48■□□□□ 0.71
OTUB1-204ENST00000447683 DNAJC10Q8IXB1 793 aa19.47■□□□□ 0.71
OTUB1-204ENST00000447683 PALLDQ8WX93 1383 aa19.47■□□□□ 0.71
OTUB1-204ENST00000447683 ZSCAN22P10073 491 aaPredicted RBP19.47■□□□□ 0.71
OTUB1-204ENST00000447683 SYT1P21579 422 aa19.47■□□□□ 0.71
OTUB1-204ENST00000447683 ST3GAL1Q11201 340 aa19.47■□□□□ 0.71
OTUB1-204ENST00000447683 KBTBD3Q8NAB2 608 aa19.47■□□□□ 0.71
OTUB1-204ENST00000447683 DNAJC2Q99543 621 aaKnown RBP19.47■□□□□ 0.71
OTUB1-204ENST00000447683 NSFL1CQ9UNZ2 370 aaKnown RBP19.47■□□□□ 0.71
OTUB1-204ENST00000447683 SPEF2Q9C093 1822 aa19.47■□□□□ 0.71
OTUB1-204ENST00000447683 STX6O43752 255 aa19.46■□□□□ 0.71
OTUB1-204ENST00000447683 ME3Q16798 604 aa19.46■□□□□ 0.71
OTUB1-204ENST00000447683 CCDC83Q8IWF9 413 aa19.46■□□□□ 0.71
OTUB1-204ENST00000447683 TMEM63CQ9P1W3 806 aa19.46■□□□□ 0.71
OTUB1-204ENST00000447683 NDUFB9Q9Y6M9 179 aa19.46■□□□□ 0.71
OTUB1-204ENST00000447683 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.46■□□□□ 0.71
OTUB1-204ENST00000447683 COL22A1Q8NFW1 1626 aaPredicted RBP19.46■□□□□ 0.71
OTUB1-204ENST00000447683 LRRC24Q50LG9 513 aa19.46■□□□□ 0.71
OTUB1-204ENST00000447683 BLOC1S2Q6QNY1 142 aa19.46■□□□□ 0.71
OTUB1-204ENST00000447683 TMEM87AQ8NBN3 555 aa19.46■□□□□ 0.71
OTUB1-204ENST00000447683 RBM27Q9P2N5 1060 aaKnown RBP19.46■□□□□ 0.71
OTUB1-204ENST00000447683 RPS6KB1P23443 525 aa19.45■□□□□ 0.7
OTUB1-204ENST00000447683 MCMDC2Q4G0Z9 681 aa19.45■□□□□ 0.7
OTUB1-204ENST00000447683 PLA2G12BQ9BX93 195 aa19.45■□□□□ 0.7
OTUB1-204ENST00000447683 WNK3Q9BYP7 1800 aa19.45■□□□□ 0.7
OTUB1-204ENST00000447683 STARD3NLO95772 234 aa19.45■□□□□ 0.7
OTUB1-204ENST00000447683 COL9A3Q14050 684 aaPredicted RBP19.45■□□□□ 0.7
OTUB1-204ENST00000447683 ANKRD1Q15327 319 aa19.45■□□□□ 0.7
OTUB1-204ENST00000447683 ZNF594Q96JF6 807 aaPredicted RBP19.45■□□□□ 0.7
OTUB1-204ENST00000447683 FBXO3Q9UK99 471 aa19.45■□□□□ 0.7
OTUB1-204ENST00000447683 TPCN1Q9ULQ1 816 aa19.45■□□□□ 0.7
OTUB1-204ENST00000447683 TAF6LQ9Y6J9 622 aa19.45■□□□□ 0.7
OTUB1-204ENST00000447683 SH3TC1Q8TE82 1336 aa19.45■□□□□ 0.7
OTUB1-204ENST00000447683 BCL9O00512 1426 aa19.44■□□□□ 0.7
OTUB1-204ENST00000447683 COL16A1Q07092 1604 aaPredicted RBP19.44■□□□□ 0.7
OTUB1-204ENST00000447683 PCCAP05165 728 aaPredicted RBP19.44■□□□□ 0.7
OTUB1-204ENST00000447683 TIMM10P62072 90 aa19.44■□□□□ 0.7
OTUB1-204ENST00000447683 KIF6Q6ZMV9 814 aa19.44■□□□□ 0.7
OTUB1-204ENST00000447683 DDX46Q7L014 1031 aaKnown RBP19.44■□□□□ 0.7
OTUB1-204ENST00000447683 NEUROD6Q96NK8 337 aa19.44■□□□□ 0.7
OTUB1-204ENST00000447683 GJB2P29033 226 aa19.43■□□□□ 0.7
OTUB1-204ENST00000447683 KRT32Q14532 448 aa19.43■□□□□ 0.7
OTUB1-204ENST00000447683 U3KPZ7 1027 aaPredicted RBP19.43■□□□□ 0.7
OTUB1-204ENST00000447683 ANKRD36CQ5JPF3 1778 aa19.43■□□□□ 0.7
OTUB1-204ENST00000447683 F13A1P00488 732 aa19.43■□□□□ 0.7
OTUB1-204ENST00000447683 NASPP49321 788 aaPredicted RBP19.43■□□□□ 0.7
OTUB1-204ENST00000447683 AHDC1Q5TGY3 1603 aaPredicted RBP19.43■□□□□ 0.7
OTUB1-204ENST00000447683 MAP3K15Q6ZN16 1313 aa19.42■□□□□ 0.7
OTUB1-204ENST00000447683 PAG1Q9NWQ8 432 aa19.42■□□□□ 0.7
OTUB1-204ENST00000447683 ROBO1Q9Y6N7 1651 aa19.42■□□□□ 0.7
OTUB1-204ENST00000447683 KAT6BQ8WYB5 2073 aa19.42■□□□□ 0.7
OTUB1-204ENST00000447683 CHGBP05060 677 aa19.42■□□□□ 0.7
OTUB1-204ENST00000447683 GIGYF2Q6Y7W6 1299 aaKnown RBP19.42■□□□□ 0.7
OTUB1-204ENST00000447683 USP48Q86UV5 1035 aa19.42■□□□□ 0.7
OTUB1-204ENST00000447683 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.42■□□□□ 0.7
OTUB1-204ENST00000447683 SEC62Q99442 399 aaKnown RBP19.42■□□□□ 0.7
OTUB1-204ENST00000447683 PUS3Q9BZE2 481 aaKnown RBP19.42■□□□□ 0.7
OTUB1-204ENST00000447683 A0A1B0GUL7 405 aa19.41■□□□□ 0.7
OTUB1-204ENST00000447683 CSF1RP07333 972 aa19.41■□□□□ 0.7
OTUB1-204ENST00000447683 TOB2Q14106 344 aaPredicted RBP19.41■□□□□ 0.7
OTUB1-204ENST00000447683 CCDC57Q2TAC2 916 aa19.41■□□□□ 0.7
OTUB1-204ENST00000447683 ZBTB38Q8NAP3 1195 aaPredicted RBP19.41■□□□□ 0.7
OTUB1-204ENST00000447683 HELLSQ9NRZ9 838 aa19.41■□□□□ 0.7
OTUB1-204ENST00000447683 MTMR6Q9Y217 621 aa19.41■□□□□ 0.7
OTUB1-204ENST00000447683 PDIA4P13667 645 aaKnown RBP19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms