RNA–Protein interactions for RNA: ENST00000447394.1

HLA-DOB-207, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-207ENST00000447394 YBX3P16989 372 aaKnown RBP eCLIP16.74■□□□□ 0.27
HLA-DOB-207ENST00000447394 CTSWP56202 376 aa16.74■□□□□ 0.27
HLA-DOB-207ENST00000447394 ITPRIPQ8IWB1 547 aa16.74■□□□□ 0.27
HLA-DOB-207ENST00000447394 RPGRQ92834 1020 aaKnown RBP16.74■□□□□ 0.27
HLA-DOB-207ENST00000447394 NPR1P16066 1061 aa16.73■□□□□ 0.27
HLA-DOB-207ENST00000447394 FOXO4P98177 505 aa16.73■□□□□ 0.27
HLA-DOB-207ENST00000447394 MASTLQ96GX5 879 aa16.73■□□□□ 0.27
HLA-DOB-207ENST00000447394 SEC31BQ9NQW1 1179 aa16.73■□□□□ 0.27
HLA-DOB-207ENST00000447394 BCS1LQ9Y276 419 aa16.73■□□□□ 0.27
HLA-DOB-207ENST00000447394 STYK1Q6J9G0 422 aa16.72■□□□□ 0.27
HLA-DOB-207ENST00000447394 OLFM4Q6UX06 510 aa16.72■□□□□ 0.27
HLA-DOB-207ENST00000447394 PIM2Q9P1W9 311 aa16.72■□□□□ 0.27
HLA-DOB-207ENST00000447394 COG6Q9Y2V7 657 aa16.72■□□□□ 0.27
HLA-DOB-207ENST00000447394 FER1L6Q2WGJ9 1857 aa16.71■□□□□ 0.27
HLA-DOB-207ENST00000447394 CCDC88AQ3V6T2 1871 aa16.71■□□□□ 0.27
HLA-DOB-207ENST00000447394 SF3B3Q15393 1217 aaKnown RBP16.71■□□□□ 0.27
HLA-DOB-207ENST00000447394 FAM161AQ3B820 660 aa16.71■□□□□ 0.27
HLA-DOB-207ENST00000447394 PRPF40BQ6NWY9 871 aaKnown RBP16.71■□□□□ 0.27
HLA-DOB-207ENST00000447394 TTLL11Q8NHH1 800 aa16.71■□□□□ 0.27
HLA-DOB-207ENST00000447394 PLA2G12BQ9BX93 195 aa16.71■□□□□ 0.27
HLA-DOB-207ENST00000447394 BICC1Q9H694 974 aaKnown RBP16.71■□□□□ 0.27
HLA-DOB-207ENST00000447394 GREM2Q9H772 168 aa16.71■□□□□ 0.27
HLA-DOB-207ENST00000447394 UBTFL1P0CB47 393 aaPredicted RBP16.7■□□□□ 0.26
HLA-DOB-207ENST00000447394 HOXA10P31260 410 aaPredicted RBP16.7■□□□□ 0.26
HLA-DOB-207ENST00000447394 DALRD3Q5D0E6 543 aaKnown RBP16.7■□□□□ 0.26
HLA-DOB-207ENST00000447394 ANKRD44Q8N8A2 993 aa16.7■□□□□ 0.26
HLA-DOB-207ENST00000447394 CELF1Q92879 486 aaKnown RBP16.7■□□□□ 0.26
HLA-DOB-207ENST00000447394 RBM17Q96I25 401 aaKnown RBP16.7■□□□□ 0.26
HLA-DOB-207ENST00000447394 C1orf115Q9H7X2 142 aa16.7■□□□□ 0.26
HLA-DOB-207ENST00000447394 SUPT16HQ9Y5B9 1047 aaKnown RBP16.7■□□□□ 0.26
HLA-DOB-207ENST00000447394 LRRFIP2Q9Y608 721 aaKnown RBP16.7■□□□□ 0.26
HLA-DOB-207ENST00000447394 LMBR1LQ6UX01 489 aa16.69■□□□□ 0.26
HLA-DOB-207ENST00000447394 TTLL6Q8N841 843 aa16.69■□□□□ 0.26
HLA-DOB-207ENST00000447394 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.69■□□□□ 0.26
HLA-DOB-207ENST00000447394 CHMP3Q9Y3E7 222 aa16.69■□□□□ 0.26
HLA-DOB-207ENST00000447394 LTBP1Q14766 1721 aa16.68■□□□□ 0.26
HLA-DOB-207ENST00000447394 C21orf2O43822 256 aa16.68■□□□□ 0.26
HLA-DOB-207ENST00000447394 MVPQ14764 893 aaKnown RBP16.68■□□□□ 0.26
HLA-DOB-207ENST00000447394 GPR162Q16538 588 aa16.68■□□□□ 0.26
HLA-DOB-207ENST00000447394 CCDC152Q4G0S7 254 aa16.68■□□□□ 0.26
HLA-DOB-207ENST00000447394 DDX46Q7L014 1031 aaKnown RBP16.68■□□□□ 0.26
HLA-DOB-207ENST00000447394 CRAMP1Q96RY5 1269 aa16.68■□□□□ 0.26
HLA-DOB-207ENST00000447394 PDZRN3Q9UPQ7 1066 aa16.68■□□□□ 0.26
HLA-DOB-207ENST00000447394 SBF1O95248 1867 aa16.67■□□□□ 0.26
HLA-DOB-207ENST00000447394 PPEF1O14829 653 aaPredicted RBP16.67■□□□□ 0.26
HLA-DOB-207ENST00000447394 CSF1RP07333 972 aa16.67■□□□□ 0.26
HLA-DOB-207ENST00000447394 CNKSR1Q969H4 720 aa16.67■□□□□ 0.26
HLA-DOB-207ENST00000447394 RTL9Q8NET4 1388 aa16.66■□□□□ 0.26
HLA-DOB-207ENST00000447394 ZBTB7BO15156 539 aaPredicted RBP16.66■□□□□ 0.26
HLA-DOB-207ENST00000447394 HSP90B1P14625 803 aaKnown RBP16.66■□□□□ 0.26
HLA-DOB-207ENST00000447394 ITGA6P23229 1130 aa16.66■□□□□ 0.26
HLA-DOB-207ENST00000447394 GRAPQ13588 217 aa16.66■□□□□ 0.26
HLA-DOB-207ENST00000447394 PDE3AQ14432 1141 aa16.66■□□□□ 0.26
HLA-DOB-207ENST00000447394 GRAPLQ8TC17 118 aaPredicted RBP16.66■□□□□ 0.26
HLA-DOB-207ENST00000447394 ZNF594Q96JF6 807 aaPredicted RBP16.66■□□□□ 0.26
HLA-DOB-207ENST00000447394 DUOX1Q9NRD9 1551 aa16.66■□□□□ 0.26
HLA-DOB-207ENST00000447394 UTRNP46939 3433 aa16.66■□□□□ 0.26
HLA-DOB-207ENST00000447394 SNED1Q8TER0 1413 aa16.65■□□□□ 0.26
HLA-DOB-207ENST00000447394 GNAI3P08754 354 aa16.65■□□□□ 0.26
HLA-DOB-207ENST00000447394 MS4A1P11836 297 aa16.65■□□□□ 0.26
HLA-DOB-207ENST00000447394 ALDH1B1P30837 517 aa16.65■□□□□ 0.26
HLA-DOB-207ENST00000447394 IRX6P78412 446 aaPredicted RBP16.65■□□□□ 0.26
HLA-DOB-207ENST00000447394 RABL6Q3YEC7 729 aaPredicted RBP16.65■□□□□ 0.26
HLA-DOB-207ENST00000447394 C7orf43Q8WVR3 580 aa16.65■□□□□ 0.26
HLA-DOB-207ENST00000447394 TIAM2Q8IVF5 1701 aa16.65■□□□□ 0.26
HLA-DOB-207ENST00000447394 RASSF7Q02833 373 aa16.64■□□□□ 0.25
HLA-DOB-207ENST00000447394 KLHDC4Q8TBB5 520 aa16.64■□□□□ 0.25
HLA-DOB-207ENST00000447394 CRBNQ96SW2 442 aa16.64■□□□□ 0.25
HLA-DOB-207ENST00000447394 CHD4Q14839 1912 aa16.63■□□□□ 0.25
HLA-DOB-207ENST00000447394 GNAI2P04899 355 aa16.63■□□□□ 0.25
HLA-DOB-207ENST00000447394 RPS8P62241 208 aaKnown RBP16.62■□□□□ 0.25
HLA-DOB-207ENST00000447394 IFIT5Q13325 482 aaKnown RBP16.62■□□□□ 0.25
HLA-DOB-207ENST00000447394 ANKRD18AQ8IVF6 992 aa16.62■□□□□ 0.25
HLA-DOB-207ENST00000447394 DDX19BQ9UMR2 479 aa16.62■□□□□ 0.25
HLA-DOB-207ENST00000447394 DICER1Q9UPY3 1922 aaKnown RBP16.61■□□□□ 0.25
HLA-DOB-207ENST00000447394 PNMA6EA0A0J9YXQ4 647 aa16.61■□□□□ 0.25
HLA-DOB-207ENST00000447394 ANKRD18BA2A2Z9 1011 aa16.61■□□□□ 0.25
HLA-DOB-207ENST00000447394 NFKBIEO00221 500 aa16.61■□□□□ 0.25
HLA-DOB-207ENST00000447394 CCDC57Q2TAC2 916 aa16.61■□□□□ 0.25
HLA-DOB-207ENST00000447394 ARHGAP27Q6ZUM4 889 aa16.61■□□□□ 0.25
HLA-DOB-207ENST00000447394 CDC5LQ99459 802 aaKnown RBP16.61■□□□□ 0.25
HLA-DOB-207ENST00000447394 ATP6V0A2Q9Y487 856 aa16.61■□□□□ 0.25
HLA-DOB-207ENST00000447394 BBOX1O75936 387 aa16.6■□□□□ 0.25
HLA-DOB-207ENST00000447394 RFX5P48382 616 aaPredicted RBP16.6■□□□□ 0.25
HLA-DOB-207ENST00000447394 PRELPP51888 382 aa16.6■□□□□ 0.25
HLA-DOB-207ENST00000447394 PUS3Q9BZE2 481 aaKnown RBP16.6■□□□□ 0.25
HLA-DOB-207ENST00000447394 ZBTB40Q9NUA8 1239 aa16.6■□□□□ 0.25
HLA-DOB-207ENST00000447394 PA2G4Q9UQ80 394 aaKnown RBP16.6■□□□□ 0.25
HLA-DOB-207ENST00000447394 COL4A5P29400 1685 aa16.59■□□□□ 0.25
HLA-DOB-207ENST00000447394 WTIPA6NIX2 430 aaPredicted RBP16.59■□□□□ 0.25
HLA-DOB-207ENST00000447394 GPSM2P81274 684 aa16.59■□□□□ 0.25
HLA-DOB-207ENST00000447394 CCDC93Q567U6 631 aa16.59■□□□□ 0.25
HLA-DOB-207ENST00000447394 GPR101Q96P66 508 aaPredicted RBP16.59■□□□□ 0.25
HLA-DOB-207ENST00000447394 SRGAP3O43295 1099 aa16.58■□□□□ 0.24
HLA-DOB-207ENST00000447394 IGHMBP2P38935 993 aaKnown RBP16.58■□□□□ 0.24
HLA-DOB-207ENST00000447394 LRRC24Q50LG9 513 aa16.58■□□□□ 0.24
HLA-DOB-207ENST00000447394 TAF7LQ5H9L4 462 aa16.58■□□□□ 0.24
HLA-DOB-207ENST00000447394 SP8Q8IXZ3 490 aa16.58■□□□□ 0.24
HLA-DOB-207ENST00000447394 MTX1Q13505 466 aa16.57■□□□□ 0.24
HLA-DOB-207ENST00000447394 CEP85Q6P2H3 762 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms