RNA–Protein interactions for RNA: ENST00000447360.6

LRRC28-203, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-203ENST00000447360 USP48Q86UV5 1035 aa9.48□□□□□ -0.89
LRRC28-203ENST00000447360 REM2Q8IYK8 340 aaPredicted RBP9.48□□□□□ -0.89
LRRC28-203ENST00000447360 C2orf69Q8N8R5 385 aa9.48□□□□□ -0.89
LRRC28-203ENST00000447360 TRPM4Q8TD43 1214 aa9.48□□□□□ -0.89
LRRC28-203ENST00000447360 RTF1Q92541 710 aaKnown RBP9.48□□□□□ -0.89
LRRC28-203ENST00000447360 PHACTR3Q96KR7 559 aa9.48□□□□□ -0.89
LRRC28-203ENST00000447360 CNOT7Q9UIV1 285 aaKnown RBP9.48□□□□□ -0.89
LRRC28-203ENST00000447360 MAP3K15Q6ZN16 1313 aa9.48□□□□□ -0.89
LRRC28-203ENST00000447360 MKI67P46013 3256 aaKnown RBP9.48□□□□□ -0.89
LRRC28-203ENST00000447360 SIPA1L3O60292 1781 aaPredicted RBP9.47□□□□□ -0.89
LRRC28-203ENST00000447360 BBOX1O75936 387 aa9.47□□□□□ -0.89
LRRC28-203ENST00000447360 ZNF157P51786 506 aaPredicted RBP9.47□□□□□ -0.89
LRRC28-203ENST00000447360 KIAA2012Q0VF49 1180 aa9.47□□□□□ -0.89
LRRC28-203ENST00000447360 DPP8Q6V1X1 898 aaPredicted RBP9.47□□□□□ -0.89
LRRC28-203ENST00000447360 DPF2Q92785 391 aa9.47□□□□□ -0.89
LRRC28-203ENST00000447360 NLRP3Q96P20 1036 aa9.47□□□□□ -0.89
LRRC28-203ENST00000447360 GBA2Q9HCG7 927 aaPredicted RBP9.47□□□□□ -0.89
LRRC28-203ENST00000447360 PER1O15534 1290 aaPredicted RBP9.46□□□□□ -0.9
LRRC28-203ENST00000447360 HTATSF1O43719 755 aaKnown RBP9.46□□□□□ -0.9
LRRC28-203ENST00000447360 RAD17O75943 681 aa9.46□□□□□ -0.9
LRRC28-203ENST00000447360 SLC10A5Q5PT55 438 aa9.46□□□□□ -0.9
LRRC28-203ENST00000447360 SUSD4Q5VX71 490 aa9.46□□□□□ -0.9
LRRC28-203ENST00000447360 KIF6Q6ZMV9 814 aa9.46□□□□□ -0.9
LRRC28-203ENST00000447360 MCM10Q7L590 875 aa9.46□□□□□ -0.9
LRRC28-203ENST00000447360 KRT26Q7Z3Y9 468 aa9.46□□□□□ -0.9
LRRC28-203ENST00000447360 PPP1R42Q7Z4L9 355 aa9.46□□□□□ -0.9
LRRC28-203ENST00000447360 SLC51AQ86UW1 340 aa9.46□□□□□ -0.9
LRRC28-203ENST00000447360 SP8Q8IXZ3 490 aa9.46□□□□□ -0.9
LRRC28-203ENST00000447360 ZNF34Q8IZ26 560 aa9.46□□□□□ -0.9
LRRC28-203ENST00000447360 CSRNP1Q96S65 589 aa9.46□□□□□ -0.9
LRRC28-203ENST00000447360 HPS5Q9UPZ3 1129 aa9.46□□□□□ -0.9
LRRC28-203ENST00000447360 UBN2Q6ZU65 1347 aa9.46□□□□□ -0.9
LRRC28-203ENST00000447360 NTSR2O95665 410 aa9.45□□□□□ -0.9
LRRC28-203ENST00000447360 SLC10A3P09131 477 aa9.45□□□□□ -0.9
LRRC28-203ENST00000447360 GPTP24298 496 aa9.45□□□□□ -0.9
LRRC28-203ENST00000447360 PRKAR2BP31323 418 aa9.45□□□□□ -0.9
LRRC28-203ENST00000447360 TAF7Q15545 349 aaPredicted RBP9.45□□□□□ -0.9
LRRC28-203ENST00000447360 PARP10Q53GL7 1025 aa9.45□□□□□ -0.9
LRRC28-203ENST00000447360 CC2D1BQ5T0F9 858 aaKnown RBP9.45□□□□□ -0.9
LRRC28-203ENST00000447360 C3orf67Q6ZVT6 689 aa9.45□□□□□ -0.9
LRRC28-203ENST00000447360 MICALL2Q8IY33 904 aa9.45□□□□□ -0.9
LRRC28-203ENST00000447360 MPNDQ8N594 471 aa9.45□□□□□ -0.9
LRRC28-203ENST00000447360 NGEFQ8N5V2 710 aa9.45□□□□□ -0.9
LRRC28-203ENST00000447360 CCER1Q8TC90 406 aaPredicted RBP9.45□□□□□ -0.9
LRRC28-203ENST00000447360 RSPH6AQ9H0K4 717 aa9.45□□□□□ -0.9
LRRC28-203ENST00000447360 COL3A1P02461 1466 aaPredicted RBP9.45□□□□□ -0.9
LRRC28-203ENST00000447360 DLK2Q6UY11 383 aa9.44□□□□□ -0.9
LRRC28-203ENST00000447360 GIGYF2Q6Y7W6 1299 aaKnown RBP9.44□□□□□ -0.9
LRRC28-203ENST00000447360 TTLL7Q6ZT98 887 aa9.44□□□□□ -0.9
LRRC28-203ENST00000447360 DCPSQ96C86 337 aaKnown RBP9.44□□□□□ -0.9
LRRC28-203ENST00000447360 ABCC4O15439 1325 aa9.44□□□□□ -0.9
LRRC28-203ENST00000447360 SHTN1A0MZ66 631 aa9.43□□□□□ -0.9
LRRC28-203ENST00000447360 YDJCA8MPS7 323 aa9.43□□□□□ -0.9
LRRC28-203ENST00000447360 RPS12P25398 132 aaKnown RBP9.43□□□□□ -0.9
LRRC28-203ENST00000447360 SAMD7Q7Z3H4 446 aa9.43□□□□□ -0.9
LRRC28-203ENST00000447360 ZBTB3Q9H5J0 574 aa9.43□□□□□ -0.9
LRRC28-203ENST00000447360 TAOK2Q9UL54 1235 aa9.43□□□□□ -0.9
LRRC28-203ENST00000447360 ZBTB12Q9Y330 459 aaPredicted RBP9.43□□□□□ -0.9
LRRC28-203ENST00000447360 RRP7AQ9Y3A4 280 aaKnown RBP9.43□□□□□ -0.9
LRRC28-203ENST00000447360 DCTN1Q14203 1278 aa9.42□□□□□ -0.9
LRRC28-203ENST00000447360 TBC1D10BQ4KMP7 808 aaPredicted RBP9.42□□□□□ -0.9
LRRC28-203ENST00000447360 NOM1Q5C9Z4 860 aaKnown RBP9.42□□□□□ -0.9
LRRC28-203ENST00000447360 HABP4Q5JVS0 413 aaKnown RBP9.42□□□□□ -0.9
LRRC28-203ENST00000447360 TMC4Q7Z404 712 aa9.42□□□□□ -0.9
LRRC28-203ENST00000447360 PNISRQ8TF01 805 aaKnown RBP9.42□□□□□ -0.9
LRRC28-203ENST00000447360 UTP14AQ9BVJ6 771 aaKnown RBP9.42□□□□□ -0.9
LRRC28-203ENST00000447360 HDAC9Q9UKV0 1011 aa9.42□□□□□ -0.9
LRRC28-203ENST00000447360 NUDCQ9Y266 331 aa9.42□□□□□ -0.9
LRRC28-203ENST00000447360 ERBB4Q15303 1308 aa9.41□□□□□ -0.9
LRRC28-203ENST00000447360 ADM5C9JUS6 153 aa9.41□□□□□ -0.9
LRRC28-203ENST00000447360 PSMD14O00487 310 aa9.41□□□□□ -0.9
LRRC28-203ENST00000447360 EGFRP00533 1210 aa9.41□□□□□ -0.9
LRRC28-203ENST00000447360 MYL6BP14649 208 aa9.41□□□□□ -0.9
LRRC28-203ENST00000447360 FKBP1BP68106 108 aa9.41□□□□□ -0.9
LRRC28-203ENST00000447360 GRAPQ13588 217 aa9.41□□□□□ -0.9
LRRC28-203ENST00000447360 POLA2Q14181 598 aa9.41□□□□□ -0.9
LRRC28-203ENST00000447360 DDX46Q7L014 1031 aaKnown RBP9.41□□□□□ -0.9
LRRC28-203ENST00000447360 SULF1Q8IWU6 871 aa9.41□□□□□ -0.9
LRRC28-203ENST00000447360 GRAPLQ8TC17 118 aaPredicted RBP9.41□□□□□ -0.9
LRRC28-203ENST00000447360 ZNF296Q8WUU4 475 aaPredicted RBP9.41□□□□□ -0.9
LRRC28-203ENST00000447360 CFAP53Q96M91 514 aa9.41□□□□□ -0.9
LRRC28-203ENST00000447360 HTTP42858 3142 aa9.4□□□□□ -0.9
LRRC28-203ENST00000447360 CENPFP49454 3210 aa9.4□□□□□ -0.9
LRRC28-203ENST00000447360 WASHC4Q2M389 1173 aa9.4□□□□□ -0.9
LRRC28-203ENST00000447360 FBXO46Q6PJ61 603 aaPredicted RBP9.4□□□□□ -0.9
LRRC28-203ENST00000447360 RASAL3Q86YV0 1011 aa9.4□□□□□ -0.9
LRRC28-203ENST00000447360 MIS18AQ9NYP9 233 aa9.4□□□□□ -0.9
LRRC28-203ENST00000447360 BRCA2P51587 3418 aa9.4□□□□□ -0.9
LRRC28-203ENST00000447360 U2AF1L5P0DN76 240 aaPredicted RBP9.39□□□□□ -0.91
LRRC28-203ENST00000447360 EIF4A1P60842 406 aaKnown RBP9.39□□□□□ -0.91
LRRC28-203ENST00000447360 U2AF1Q01081 240 aaKnown RBP eCLIP9.39□□□□□ -0.91
LRRC28-203ENST00000447360 KIF4BQ2VIQ3 1234 aa9.39□□□□□ -0.91
LRRC28-203ENST00000447360 RBM26Q5T8P6 1007 aaKnown RBP9.39□□□□□ -0.91
LRRC28-203ENST00000447360 IFNLR1Q8IU57 520 aaPredicted RBP9.39□□□□□ -0.91
LRRC28-203ENST00000447360 CDCA5Q96FF9 252 aa9.39□□□□□ -0.91
LRRC28-203ENST00000447360 GGA3Q9NZ52 723 aa9.39□□□□□ -0.91
LRRC28-203ENST00000447360 SZT2Q5T011 3432 aa9.39□□□□□ -0.91
LRRC28-203ENST00000447360 A0A0C4DFX4 3053 aa9.38□□□□□ -0.91
LRRC28-203ENST00000447360 GPR25O00155 361 aa9.38□□□□□ -0.91
LRRC28-203ENST00000447360 TBC1D8O95759 1140 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms