RNA–Protein interactions for RNA: ENST00000445399.5

TGFA-206, Transcript of transforming growth factor alpha, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFA, Length 812 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFA-206ENST00000445399 CENPBP07199 599 aaPredicted RBP16.64■□□□□ 0.25
TGFA-206ENST00000445399 NPR1P16066 1061 aa16.64■□□□□ 0.25
TGFA-206ENST00000445399 HOXA10P31260 410 aaPredicted RBP16.64■□□□□ 0.25
TGFA-206ENST00000445399 ZNF622Q969S3 477 aaKnown RBP eCLIP16.64■□□□□ 0.25
TGFA-206ENST00000445399 BICC1Q9H694 974 aaKnown RBP16.64■□□□□ 0.25
TGFA-206ENST00000445399 CCDC152Q4G0S7 254 aa16.63■□□□□ 0.25
TGFA-206ENST00000445399 STYK1Q6J9G0 422 aa16.63■□□□□ 0.25
TGFA-206ENST00000445399 LMBR1LQ6UX01 489 aa16.63■□□□□ 0.25
TGFA-206ENST00000445399 ANKRD44Q8N8A2 993 aa16.63■□□□□ 0.25
TGFA-206ENST00000445399 RPGRQ92834 1020 aaKnown RBP16.63■□□□□ 0.25
TGFA-206ENST00000445399 RBM17Q96I25 401 aaKnown RBP16.63■□□□□ 0.25
TGFA-206ENST00000445399 GREM2Q9H772 168 aa16.63■□□□□ 0.25
TGFA-206ENST00000445399 WWC3Q9ULE0 1092 aa16.63■□□□□ 0.25
TGFA-206ENST00000445399 DDX19BQ9UMR2 479 aa16.63■□□□□ 0.25
TGFA-206ENST00000445399 LRRFIP2Q9Y608 721 aaKnown RBP16.63■□□□□ 0.25
TGFA-206ENST00000445399 COL11A2P13942 1736 aaPredicted RBP16.62■□□□□ 0.25
TGFA-206ENST00000445399 LAMB2P55268 1798 aa16.62■□□□□ 0.25
TGFA-206ENST00000445399 RABL6Q3YEC7 729 aaPredicted RBP16.62■□□□□ 0.25
TGFA-206ENST00000445399 SEC31BQ9NQW1 1179 aa16.62■□□□□ 0.25
TGFA-206ENST00000445399 PIM2Q9P1W9 311 aa16.62■□□□□ 0.25
TGFA-206ENST00000445399 GNAI2P04899 355 aa16.61■□□□□ 0.25
TGFA-206ENST00000445399 FAM161AQ3B820 660 aa16.61■□□□□ 0.25
TGFA-206ENST00000445399 DDX46Q7L014 1031 aaKnown RBP16.61■□□□□ 0.25
TGFA-206ENST00000445399 CRAMP1Q96RY5 1269 aa16.61■□□□□ 0.25
TGFA-206ENST00000445399 CRBNQ96SW2 442 aa16.61■□□□□ 0.25
TGFA-206ENST00000445399 C1orf115Q9H7X2 142 aa16.61■□□□□ 0.25
TGFA-206ENST00000445399 ZBTB40Q9NUA8 1239 aa16.61■□□□□ 0.25
TGFA-206ENST00000445399 ITGA6P23229 1130 aa16.6■□□□□ 0.25
TGFA-206ENST00000445399 ALDH1B1P30837 517 aa16.6■□□□□ 0.25
TGFA-206ENST00000445399 TTLL6Q8N841 843 aa16.6■□□□□ 0.25
TGFA-206ENST00000445399 CELF1Q92879 486 aaKnown RBP16.6■□□□□ 0.25
TGFA-206ENST00000445399 CNKSR1Q969H4 720 aa16.6■□□□□ 0.25
TGFA-206ENST00000445399 HDAC5Q9UQL6 1122 aa16.6■□□□□ 0.25
TGFA-206ENST00000445399 GRAPQ13588 217 aa16.59■□□□□ 0.25
TGFA-206ENST00000445399 GRAPLQ8TC17 118 aaPredicted RBP16.59■□□□□ 0.25
TGFA-206ENST00000445399 CHMP3Q9Y3E7 222 aa16.59■□□□□ 0.25
TGFA-206ENST00000445399 RTL9Q8NET4 1388 aa16.59■□□□□ 0.25
TGFA-206ENST00000445399 COL4A1P02462 1669 aa16.59■□□□□ 0.25
TGFA-206ENST00000445399 IRX6P78412 446 aaPredicted RBP16.58■□□□□ 0.24
TGFA-206ENST00000445399 DALRD3Q5D0E6 543 aaKnown RBP16.58■□□□□ 0.24
TGFA-206ENST00000445399 PRPF40BQ6NWY9 871 aaKnown RBP16.58■□□□□ 0.24
TGFA-206ENST00000445399 SLC51AQ86UW1 340 aa16.58■□□□□ 0.24
TGFA-206ENST00000445399 DLEC1Q9Y238 1755 aa16.57■□□□□ 0.24
TGFA-206ENST00000445399 RPS8P62241 208 aaKnown RBP16.57■□□□□ 0.24
TGFA-206ENST00000445399 IFIT5Q13325 482 aaKnown RBP16.57■□□□□ 0.24
TGFA-206ENST00000445399 C7orf43Q8WVR3 580 aa16.57■□□□□ 0.24
TGFA-206ENST00000445399 CHMP4BQ9H444 224 aaKnown RBP16.57■□□□□ 0.24
TGFA-206ENST00000445399 BCS1LQ9Y276 419 aa16.57■□□□□ 0.24
TGFA-206ENST00000445399 ANKRD18BA2A2Z9 1011 aa16.56■□□□□ 0.24
TGFA-206ENST00000445399 BBOX1O75936 387 aa16.56■□□□□ 0.24
TGFA-206ENST00000445399 YBX3P16989 372 aaKnown RBP eCLIP16.56■□□□□ 0.24
TGFA-206ENST00000445399 RFX5P48382 616 aaPredicted RBP16.56■□□□□ 0.24
TGFA-206ENST00000445399 MTX1Q13505 466 aa16.56■□□□□ 0.24
TGFA-206ENST00000445399 CCDC57Q2TAC2 916 aa16.56■□□□□ 0.24
TGFA-206ENST00000445399 OLFM4Q6UX06 510 aa16.56■□□□□ 0.24
TGFA-206ENST00000445399 EXOC6Q8TAG9 804 aa16.56■□□□□ 0.24
TGFA-206ENST00000445399 ZNF594Q96JF6 807 aaPredicted RBP16.56■□□□□ 0.24
TGFA-206ENST00000445399 ZNF219Q9P2Y4 722 aaPredicted RBP16.56■□□□□ 0.24
TGFA-206ENST00000445399 MYH3P11055 1940 aa16.55■□□□□ 0.24
TGFA-206ENST00000445399 TAF1P21675 1872 aa16.55■□□□□ 0.24
TGFA-206ENST00000445399 PNMA6EA0A0J9YXQ4 647 aa16.55■□□□□ 0.24
TGFA-206ENST00000445399 PPEF1O14829 653 aaPredicted RBP16.55■□□□□ 0.24
TGFA-206ENST00000445399 C21orf2O43822 256 aa16.55■□□□□ 0.24
TGFA-206ENST00000445399 ATP8B2P98198 1209 aa16.55■□□□□ 0.24
TGFA-206ENST00000445399 ANKRD18AQ8IVF6 992 aa16.55■□□□□ 0.24
TGFA-206ENST00000445399 KLHDC4Q8TBB5 520 aa16.55■□□□□ 0.24
TGFA-206ENST00000445399 CDC5LQ99459 802 aaKnown RBP16.55■□□□□ 0.24
TGFA-206ENST00000445399 BRCA1P38398 1863 aaKnown RBP16.54■□□□□ 0.24
TGFA-206ENST00000445399 SLX4Q8IY92 1834 aa16.54■□□□□ 0.24
TGFA-206ENST00000445399 SRGAP3O43295 1099 aa16.54■□□□□ 0.24
TGFA-206ENST00000445399 CEP85Q6P2H3 762 aa16.54■□□□□ 0.24
TGFA-206ENST00000445399 PELP1Q8IZL8 1130 aaKnown RBP16.54■□□□□ 0.24
TGFA-206ENST00000445399 PTPN12Q05209 780 aaKnown RBP16.53■□□□□ 0.24
TGFA-206ENST00000445399 SP8Q8IXZ3 490 aa16.53■□□□□ 0.24
TGFA-206ENST00000445399 BSDC1Q9NW68 430 aaPredicted RBP16.53■□□□□ 0.24
TGFA-206ENST00000445399 ATP6V0A2Q9Y487 856 aa16.53■□□□□ 0.24
TGFA-206ENST00000445399 IGHMBP2P38935 993 aaKnown RBP16.52■□□□□ 0.24
TGFA-206ENST00000445399 POLA2Q14181 598 aa16.52■□□□□ 0.24
TGFA-206ENST00000445399 GPR162Q16538 588 aa16.52■□□□□ 0.24
TGFA-206ENST00000445399 TAF7LQ5H9L4 462 aa16.52■□□□□ 0.24
TGFA-206ENST00000445399 SIRT2Q8IXJ6 389 aa16.52■□□□□ 0.24
TGFA-206ENST00000445399 PUS3Q9BZE2 481 aaKnown RBP16.52■□□□□ 0.24
TGFA-206ENST00000445399 PA2G4Q9UQ80 394 aaKnown RBP16.52■□□□□ 0.24
TGFA-206ENST00000445399 TMC4Q7Z404 712 aa16.51■□□□□ 0.23
TGFA-206ENST00000445399 RPAP2Q8IXW5 612 aaPredicted RBP16.51■□□□□ 0.23
TGFA-206ENST00000445399 SSH3Q8TE77 659 aa16.51■□□□□ 0.23
TGFA-206ENST00000445399 MPHOSPH8Q99549 860 aa16.51■□□□□ 0.23
TGFA-206ENST00000445399 PCDHB15Q9Y5E8 787 aa16.51■□□□□ 0.23
TGFA-206ENST00000445399 LRRC24Q50LG9 513 aa16.5■□□□□ 0.23
TGFA-206ENST00000445399 LDHAL6AQ6ZMR3 332 aa16.5■□□□□ 0.23
TGFA-206ENST00000445399 COPRSQ9NQ92 184 aa16.5■□□□□ 0.23
TGFA-206ENST00000445399 MINPP1Q9UNW1 487 aa16.5■□□□□ 0.23
TGFA-206ENST00000445399 RIPOR2Q9Y4F9 1068 aa16.5■□□□□ 0.23
TGFA-206ENST00000445399 GOLGB1Q14789 3259 aaKnown RBP16.5■□□□□ 0.23
TGFA-206ENST00000445399 CACNA1SQ13698 1873 aa16.49■□□□□ 0.23
TGFA-206ENST00000445399 SNED1Q8TER0 1413 aa16.49■□□□□ 0.23
TGFA-206ENST00000445399 GPSM2P81274 684 aa16.48■□□□□ 0.23
TGFA-206ENST00000445399 CCDC93Q567U6 631 aa16.48■□□□□ 0.23
TGFA-206ENST00000445399 SOGA3Q5TF21 947 aa16.48■□□□□ 0.23
TGFA-206ENST00000445399 CC2D2BQ6DHV5 1058 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms