RNA–Protein interactions for RNA: ENST00000445357.1

NCLP1-201, Transcript of nucleolin pseudogene 1, humanhuman

BASIC

Gene NCLP1, Length 1,963 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP1-201ENST00000445357 PSMA5P28066 241 aa16.96■□□□□ 0.31
NCLP1-201ENST00000445357 RNF20Q5VTR2 975 aa16.96■□□□□ 0.31
NCLP1-201ENST00000445357 FOXD4L5Q5VV16 416 aaPredicted RBP16.96■□□□□ 0.31
NCLP1-201ENST00000445357 ATG9AQ7Z3C6 839 aa16.96■□□□□ 0.31
NCLP1-201ENST00000445357 TICAM2Q86XR7 235 aa16.96■□□□□ 0.31
NCLP1-201ENST00000445357 VSIG10Q8N0Z9 540 aa16.96■□□□□ 0.31
NCLP1-201ENST00000445357 FOXD4L4Q8WXT5 416 aaPredicted RBP16.96■□□□□ 0.31
NCLP1-201ENST00000445357 CHAMP1Q96JM3 812 aa16.96■□□□□ 0.31
NCLP1-201ENST00000445357 HAUS7Q99871 368 aa16.96■□□□□ 0.31
NCLP1-201ENST00000445357 ISCA1Q9BUE6 129 aa16.96■□□□□ 0.31
NCLP1-201ENST00000445357 ATG3Q9NT62 314 aa16.96■□□□□ 0.31
NCLP1-201ENST00000445357 TMOD3Q9NYL9 352 aa16.96■□□□□ 0.31
NCLP1-201ENST00000445357 HMG20BQ9P0W2 317 aa16.96■□□□□ 0.31
NCLP1-201ENST00000445357 COL22A1Q8NFW1 1626 aaPredicted RBP16.95■□□□□ 0.3
NCLP1-201ENST00000445357 KCNJ4P48050 445 aa16.95■□□□□ 0.3
NCLP1-201ENST00000445357 TSGA10IPQ3SY00 556 aa16.95■□□□□ 0.3
NCLP1-201ENST00000445357 ALDH8A1Q9H2A2 487 aaPredicted RBP16.95■□□□□ 0.3
NCLP1-201ENST00000445357 ANKRD36CQ5JPF3 1778 aa16.95■□□□□ 0.3
NCLP1-201ENST00000445357 ZNF609O15014 1411 aa16.95■□□□□ 0.3
NCLP1-201ENST00000445357 TAF5LO75529 589 aa16.95■□□□□ 0.3
NCLP1-201ENST00000445357 LARGE1O95461 756 aa16.95■□□□□ 0.3
NCLP1-201ENST00000445357 NCLP19338 710 aaKnown RBP16.95■□□□□ 0.3
NCLP1-201ENST00000445357 IL15P40933 162 aaPredicted RBP16.95■□□□□ 0.3
NCLP1-201ENST00000445357 USPL1Q5W0Q7 1092 aa16.95■□□□□ 0.3
NCLP1-201ENST00000445357 TEX13AQ9BXU3 409 aaPredicted RBP16.95■□□□□ 0.3
NCLP1-201ENST00000445357 ZBTB3Q9H5J0 574 aa16.95■□□□□ 0.3
NCLP1-201ENST00000445357 ROBO1Q9Y6N7 1651 aa16.94■□□□□ 0.3
NCLP1-201ENST00000445357 PALLDQ8WX93 1383 aa16.94■□□□□ 0.3
NCLP1-201ENST00000445357 TRIM28Q13263 835 aaKnown RBP16.94■□□□□ 0.3
NCLP1-201ENST00000445357 ZNF589Q86UQ0 364 aaPredicted RBP16.94■□□□□ 0.3
NCLP1-201ENST00000445357 EDC3Q96F86 508 aaKnown RBP16.94■□□□□ 0.3
NCLP1-201ENST00000445357 SMC3Q9UQE7 1217 aa16.94■□□□□ 0.3
NCLP1-201ENST00000445357 CIAO1O76071 339 aa16.93■□□□□ 0.3
NCLP1-201ENST00000445357 TMEM87AQ8NBN3 555 aa16.93■□□□□ 0.3
NCLP1-201ENST00000445357 COL16A1Q07092 1604 aaPredicted RBP16.93■□□□□ 0.3
NCLP1-201ENST00000445357 EYA2O00167 538 aa16.93■□□□□ 0.3
NCLP1-201ENST00000445357 ZSCAN22P10073 491 aaPredicted RBP16.93■□□□□ 0.3
NCLP1-201ENST00000445357 CHMP3Q9Y3E7 222 aa16.93■□□□□ 0.3
NCLP1-201ENST00000445357 STX6O43752 255 aa16.92■□□□□ 0.3
NCLP1-201ENST00000445357 SYT1P21579 422 aa16.92■□□□□ 0.3
NCLP1-201ENST00000445357 TCIRG1Q13488 830 aa16.92■□□□□ 0.3
NCLP1-201ENST00000445357 TMEM63CQ9P1W3 806 aa16.92■□□□□ 0.3
NCLP1-201ENST00000445357 SH3TC1Q8TE82 1336 aa16.92■□□□□ 0.3
NCLP1-201ENST00000445357 ST3GAL1Q11201 340 aa16.91■□□□□ 0.3
NCLP1-201ENST00000445357 ANKRD1Q15327 319 aa16.91■□□□□ 0.3
NCLP1-201ENST00000445357 KBTBD3Q8NAB2 608 aa16.91■□□□□ 0.3
NCLP1-201ENST00000445357 AHDC1Q5TGY3 1603 aaPredicted RBP16.91■□□□□ 0.3
NCLP1-201ENST00000445357 RPS6KB1P23443 525 aa16.91■□□□□ 0.3
NCLP1-201ENST00000445357 NASPP49321 788 aaPredicted RBP16.91■□□□□ 0.3
NCLP1-201ENST00000445357 ME3Q16798 604 aa16.91■□□□□ 0.3
NCLP1-201ENST00000445357 BLOC1S2Q6QNY1 142 aa16.91■□□□□ 0.3
NCLP1-201ENST00000445357 CCDC83Q8IWF9 413 aa16.91■□□□□ 0.3
NCLP1-201ENST00000445357 PIGBQ92521 554 aa16.91■□□□□ 0.3
NCLP1-201ENST00000445357 DNAJC2Q99543 621 aaKnown RBP16.91■□□□□ 0.3
NCLP1-201ENST00000445357 LARP6Q9BRS8 491 aaKnown RBP16.91■□□□□ 0.3
NCLP1-201ENST00000445357 RBM27Q9P2N5 1060 aaKnown RBP16.91■□□□□ 0.3
NCLP1-201ENST00000445357 FBXO3Q9UK99 471 aa16.91■□□□□ 0.3
NCLP1-201ENST00000445357 NSFL1CQ9UNZ2 370 aaKnown RBP16.91■□□□□ 0.3
NCLP1-201ENST00000445357 LAMA4Q16363 1823 aa16.9■□□□□ 0.3
NCLP1-201ENST00000445357 MYH3P11055 1940 aa16.9■□□□□ 0.3
NCLP1-201ENST00000445357 KRT32Q14532 448 aa16.9■□□□□ 0.3
NCLP1-201ENST00000445357 PLA2G12BQ9BX93 195 aa16.9■□□□□ 0.3
NCLP1-201ENST00000445357 BTG4Q9NY30 223 aa16.9■□□□□ 0.3
NCLP1-201ENST00000445357 BCL9O00512 1426 aa16.9■□□□□ 0.3
NCLP1-201ENST00000445357 F13A1P00488 732 aa16.89■□□□□ 0.3
NCLP1-201ENST00000445357 MCMDC2Q4G0Z9 681 aa16.89■□□□□ 0.3
NCLP1-201ENST00000445357 DNAJC10Q8IXB1 793 aa16.89■□□□□ 0.3
NCLP1-201ENST00000445357 ASAP1Q9ULH1 1129 aa16.89■□□□□ 0.3
NCLP1-201ENST00000445357 TPCN1Q9ULQ1 816 aa16.89■□□□□ 0.3
NCLP1-201ENST00000445357 U3KPZ7 1027 aaPredicted RBP16.89■□□□□ 0.3
NCLP1-201ENST00000445357 PCCAP05165 728 aaPredicted RBP16.89■□□□□ 0.29
NCLP1-201ENST00000445357 PDIA4P13667 645 aaKnown RBP16.89■□□□□ 0.29
NCLP1-201ENST00000445357 GJB2P29033 226 aa16.89■□□□□ 0.29
NCLP1-201ENST00000445357 KIF6Q6ZMV9 814 aa16.89■□□□□ 0.29
NCLP1-201ENST00000445357 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.89■□□□□ 0.29
NCLP1-201ENST00000445357 PPP1R9BQ96SB3 815 aa16.89■□□□□ 0.29
NCLP1-201ENST00000445357 ATP6V1DQ9Y5K8 247 aa16.89■□□□□ 0.29
NCLP1-201ENST00000445357 STARD3NLO95772 234 aa16.88■□□□□ 0.29
NCLP1-201ENST00000445357 CCDC173Q0VFZ6 552 aa16.88■□□□□ 0.29
NCLP1-201ENST00000445357 LRRC24Q50LG9 513 aa16.88■□□□□ 0.29
NCLP1-201ENST00000445357 LRSAM1Q6UWE0 723 aa16.88■□□□□ 0.29
NCLP1-201ENST00000445357 TAF6LQ9Y6J9 622 aa16.88■□□□□ 0.29
NCLP1-201ENST00000445357 NDUFB9Q9Y6M9 179 aa16.88■□□□□ 0.29
NCLP1-201ENST00000445357 DDX46Q7L014 1031 aaKnown RBP16.88■□□□□ 0.29
NCLP1-201ENST00000445357 USP48Q86UV5 1035 aa16.88■□□□□ 0.29
NCLP1-201ENST00000445357 SYAP1Q96A49 352 aaPredicted RBP16.88■□□□□ 0.29
NCLP1-201ENST00000445357 RRAGDQ9NQL2 400 aaPredicted RBP16.88■□□□□ 0.29
NCLP1-201ENST00000445357 HELLSQ9NRZ9 838 aa16.88■□□□□ 0.29
NCLP1-201ENST00000445357 PAG1Q9NWQ8 432 aa16.88■□□□□ 0.29
NCLP1-201ENST00000445357 MTMR6Q9Y217 621 aa16.88■□□□□ 0.29
NCLP1-201ENST00000445357 NUP98P52948 1817 aa16.87■□□□□ 0.29
NCLP1-201ENST00000445357 PRIM1P49642 420 aaKnown RBP16.87■□□□□ 0.29
NCLP1-201ENST00000445357 COL9A3Q14050 684 aaPredicted RBP16.87■□□□□ 0.29
NCLP1-201ENST00000445357 ZNF594Q96JF6 807 aaPredicted RBP16.87■□□□□ 0.29
NCLP1-201ENST00000445357 NEUROD6Q96NK8 337 aa16.87■□□□□ 0.29
NCLP1-201ENST00000445357 MAP3K15Q6ZN16 1313 aa16.87■□□□□ 0.29
NCLP1-201ENST00000445357 DOT1LQ8TEK3 1739 aa16.86■□□□□ 0.29
NCLP1-201ENST00000445357 A0A1B0GUL7 405 aa16.86■□□□□ 0.29
NCLP1-201ENST00000445357 TOB2Q14106 344 aaPredicted RBP16.86■□□□□ 0.29
NCLP1-201ENST00000445357 MYH7P12883 1935 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms