RNA–Protein interactions for RNA: ENST00000445336.2

BRAFP1-201, Transcript of BRAF pseudogene 1, humanhuman

BASIC

Gene BRAFP1, Length 2,703 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP1-201ENST00000445336 IFNL1Q8IU54 200 aa9.35□□□□□ -0.91
BRAFP1-201ENST00000445336 UBE2OQ9C0C9 1292 aaKnown RBP9.35□□□□□ -0.91
BRAFP1-201ENST00000445336 ZNRF3Q9ULT6 936 aa9.35□□□□□ -0.91
BRAFP1-201ENST00000445336 TESPA1A2RU30 521 aaPredicted RBP9.34□□□□□ -0.91
BRAFP1-201ENST00000445336 IFNL2Q8IZJ0 200 aa9.34□□□□□ -0.91
BRAFP1-201ENST00000445336 CD99L2Q8TCZ2 262 aa9.34□□□□□ -0.91
BRAFP1-201ENST00000445336 ZCCHC17Q9NP64 241 aaKnown RBP9.34□□□□□ -0.91
BRAFP1-201ENST00000445336 COL1A1P02452 1464 aaPredicted RBP9.34□□□□□ -0.91
BRAFP1-201ENST00000445336 SBNO2Q9Y2G9 1366 aa9.34□□□□□ -0.91
BRAFP1-201ENST00000445336 PTCH2Q9Y6C5 1203 aa9.34□□□□□ -0.91
BRAFP1-201ENST00000445336 PI4K2BG5E9Z4 385 aa9.33□□□□□ -0.92
BRAFP1-201ENST00000445336 GMPSP49915 693 aaPredicted RBP9.33□□□□□ -0.92
BRAFP1-201ENST00000445336 EVC2Q86UK5 1308 aa9.33□□□□□ -0.92
BRAFP1-201ENST00000445336 SMIM22K7EJ46 135 aa9.33□□□□□ -0.92
BRAFP1-201ENST00000445336 CDCA5Q96FF9 252 aa9.33□□□□□ -0.92
BRAFP1-201ENST00000445336 IRF2BPLQ9H1B7 796 aa9.33□□□□□ -0.92
BRAFP1-201ENST00000445336 ZBTB12Q9Y330 459 aaPredicted RBP9.33□□□□□ -0.92
BRAFP1-201ENST00000445336 CENPJQ9HC77 1338 aaPredicted RBP9.33□□□□□ -0.92
BRAFP1-201ENST00000445336 MAGEA10P43363 369 aaPredicted RBP9.33□□□□□ -0.92
BRAFP1-201ENST00000445336 RTFDC1Q9BY42 306 aaPredicted RBP9.33□□□□□ -0.92
BRAFP1-201ENST00000445336 PKD1L2Q7Z442 2459 aa9.32□□□□□ -0.92
BRAFP1-201ENST00000445336 TCIRG1Q13488 830 aa9.32□□□□□ -0.92
BRAFP1-201ENST00000445336 LARGE2Q8N3Y3 721 aa9.32□□□□□ -0.92
BRAFP1-201ENST00000445336 TSPYL2Q9H2G4 693 aaPredicted RBP9.32□□□□□ -0.92
BRAFP1-201ENST00000445336 CXXC1Q9P0U4 656 aaPredicted RBP9.32□□□□□ -0.92
BRAFP1-201ENST00000445336 POLR2AP24928 1970 aaKnown RBP9.31□□□□□ -0.92
BRAFP1-201ENST00000445336 MMP14P50281 582 aa9.31□□□□□ -0.92
BRAFP1-201ENST00000445336 UBXN2AP68543 259 aa9.31□□□□□ -0.92
BRAFP1-201ENST00000445336 NBPF6Q5VWK0 638 aa9.31□□□□□ -0.92
BRAFP1-201ENST00000445336 SULF1Q8IWU6 871 aa9.31□□□□□ -0.92
BRAFP1-201ENST00000445336 NBPF4Q96M43 638 aa9.31□□□□□ -0.92
BRAFP1-201ENST00000445336 CNBD1Q8NA66 436 aa9.31□□□□□ -0.92
BRAFP1-201ENST00000445336 SLC51AQ86UW1 340 aa9.3□□□□□ -0.92
BRAFP1-201ENST00000445336 TRPM4Q8TD43 1214 aa9.3□□□□□ -0.92
BRAFP1-201ENST00000445336 CRISPLD2Q9H0B8 497 aa9.3□□□□□ -0.92
BRAFP1-201ENST00000445336 PHKG2P15735 406 aa9.3□□□□□ -0.92
BRAFP1-201ENST00000445336 SPRYD7Q5W111 196 aa9.3□□□□□ -0.92
BRAFP1-201ENST00000445336 HELBQ8NG08 1087 aaPredicted RBP9.3□□□□□ -0.92
BRAFP1-201ENST00000445336 R3HDMLQ9H3Y0 253 aa9.3□□□□□ -0.92
BRAFP1-201ENST00000445336 SGPL1O95470 568 aa9.29□□□□□ -0.92
BRAFP1-201ENST00000445336 CXCL9Q07325 125 aa9.29□□□□□ -0.92
BRAFP1-201ENST00000445336 VSIG10Q8N0Z9 540 aa9.29□□□□□ -0.92
BRAFP1-201ENST00000445336 NECAB2Q7Z6G3 386 aa9.28□□□□□ -0.92
BRAFP1-201ENST00000445336 RBM42Q9BTD8 480 aaKnown RBP9.28□□□□□ -0.92
BRAFP1-201ENST00000445336 CNOT7Q9UIV1 285 aaKnown RBP9.28□□□□□ -0.92
BRAFP1-201ENST00000445336 ADGRA2Q96PE1 1338 aa9.28□□□□□ -0.92
BRAFP1-201ENST00000445336 HOXD10P28358 340 aa9.28□□□□□ -0.92
BRAFP1-201ENST00000445336 MYLIPQ8WY64 445 aa9.28□□□□□ -0.92
BRAFP1-201ENST00000445336 TAF1P21675 1872 aa9.27□□□□□ -0.92
BRAFP1-201ENST00000445336 KIF22Q14807 665 aa9.27□□□□□ -0.92
BRAFP1-201ENST00000445336 TRIM47Q96LD4 638 aa9.27□□□□□ -0.92
BRAFP1-201ENST00000445336 PUS7Q96PZ0 661 aaKnown RBP9.27□□□□□ -0.92
BRAFP1-201ENST00000445336 BCL2L13Q9BXK5 485 aa9.27□□□□□ -0.92
BRAFP1-201ENST00000445336 C11orf16Q9NQ32 467 aa9.27□□□□□ -0.92
BRAFP1-201ENST00000445336 UBR2Q8IWV8 1755 aa9.27□□□□□ -0.93
BRAFP1-201ENST00000445336 IBTKQ9P2D0 1353 aaPredicted RBP9.27□□□□□ -0.93
BRAFP1-201ENST00000445336 LDLRAD1Q5T700 205 aa9.27□□□□□ -0.93
BRAFP1-201ENST00000445336 KRT37O76014 449 aa9.26□□□□□ -0.93
BRAFP1-201ENST00000445336 PSME4Q14997 1843 aa9.26□□□□□ -0.93
BRAFP1-201ENST00000445336 SOX12O15370 315 aa9.26□□□□□ -0.93
BRAFP1-201ENST00000445336 BMP1P13497 986 aa9.26□□□□□ -0.93
BRAFP1-201ENST00000445336 CCL5P13501 91 aa9.26□□□□□ -0.93
BRAFP1-201ENST00000445336 HOXA10P31260 410 aaPredicted RBP9.26□□□□□ -0.93
BRAFP1-201ENST00000445336 PKN1Q16512 942 aa9.26□□□□□ -0.93
BRAFP1-201ENST00000445336 AMPHP49418 695 aa9.25□□□□□ -0.93
BRAFP1-201ENST00000445336 PTPN5P54829 565 aa9.25□□□□□ -0.93
BRAFP1-201ENST00000445336 EPHX3Q9H6B9 360 aa9.25□□□□□ -0.93
BRAFP1-201ENST00000445336 ARMC9Q7Z3E5 817 aa9.25□□□□□ -0.93
BRAFP1-201ENST00000445336 U2AF1L4Q8WU68 220 aaKnown RBP9.25□□□□□ -0.93
BRAFP1-201ENST00000445336 NF2P35240 595 aa9.25□□□□□ -0.93
BRAFP1-201ENST00000445336 SLAIN1Q8ND83 568 aa9.25□□□□□ -0.93
BRAFP1-201ENST00000445336 LTBP2Q14767 1821 aa9.24□□□□□ -0.93
BRAFP1-201ENST00000445336 MAST2Q6P0Q8 1798 aa9.24□□□□□ -0.93
BRAFP1-201ENST00000445336 CYP19A1P11511 503 aaPredicted RBP9.24□□□□□ -0.93
BRAFP1-201ENST00000445336 CRY2Q49AN0 593 aa9.24□□□□□ -0.93
BRAFP1-201ENST00000445336 LRRC37A2A6NM11 1700 aa9.23□□□□□ -0.93
BRAFP1-201ENST00000445336 FLT4P35916 1363 aa9.23□□□□□ -0.93
BRAFP1-201ENST00000445336 ADM5C9JUS6 153 aa9.23□□□□□ -0.93
BRAFP1-201ENST00000445336 CLEC4GQ6UXB4 293 aa9.23□□□□□ -0.93
BRAFP1-201ENST00000445336 FBXL18Q96ME1 805 aa9.23□□□□□ -0.93
BRAFP1-201ENST00000445336 CRAMP1Q96RY5 1269 aa9.23□□□□□ -0.93
BRAFP1-201ENST00000445336 WDHD1O75717 1129 aaPredicted RBP9.23□□□□□ -0.93
BRAFP1-201ENST00000445336 MICALL2Q8IY33 904 aa9.23□□□□□ -0.93
BRAFP1-201ENST00000445336 SETDB2Q96T68 719 aa9.23□□□□□ -0.93
BRAFP1-201ENST00000445336 COL9A2Q14055 689 aaPredicted RBP9.22□□□□□ -0.93
BRAFP1-201ENST00000445336 NBPF10Q6P3W6 841 aaKnown RBP9.22□□□□□ -0.93
BRAFP1-201ENST00000445336 ZFYVE28Q9HCC9 887 aa9.22□□□□□ -0.93
BRAFP1-201ENST00000445336 CRHR2Q13324 411 aa9.22□□□□□ -0.93
BRAFP1-201ENST00000445336 TBC1D9BQ66K14 1250 aa9.22□□□□□ -0.93
BRAFP1-201ENST00000445336 LTV1Q96GA3 475 aaPredicted RBP9.22□□□□□ -0.93
BRAFP1-201ENST00000445336 KIAA2012Q0VF49 1180 aa9.21□□□□□ -0.93
BRAFP1-201ENST00000445336 TTYH1Q9H313 450 aaPredicted RBP9.21□□□□□ -0.93
BRAFP1-201ENST00000445336 LRRC37AA6NMS7 1700 aa9.21□□□□□ -0.94
BRAFP1-201ENST00000445336 PROB1E7EW31 1015 aa9.21□□□□□ -0.94
BRAFP1-201ENST00000445336 PPIP5K2O43314 1243 aa9.21□□□□□ -0.94
BRAFP1-201ENST00000445336 GRK4P32298 578 aa9.21□□□□□ -0.94
BRAFP1-201ENST00000445336 ZNF280AP59817 542 aaPredicted RBP9.21□□□□□ -0.94
BRAFP1-201ENST00000445336 AMER1Q5JTC6 1135 aaPredicted RBP9.21□□□□□ -0.94
BRAFP1-201ENST00000445336 C7orf61Q8IZ16 206 aa9.21□□□□□ -0.94
BRAFP1-201ENST00000445336 TAOK2Q9UL54 1235 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms