RNA–Protein interactions for RNA: ENST00000445181.5

C9orf3-207, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 873 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-207ENST00000445181 CC2D2BQ6DHV5 1058 aa30.46■■■□□ 2.47
C9orf3-207ENST00000445181 PCCAP05165 728 aaPredicted RBP30.45■■■□□ 2.47
C9orf3-207ENST00000445181 HSP90B1P14625 803 aaKnown RBP30.45■■■□□ 2.47
C9orf3-207ENST00000445181 FSTL1Q12841 308 aa30.45■■■□□ 2.47
C9orf3-207ENST00000445181 JARID2Q92833 1246 aaPredicted RBP30.44■■■□□ 2.46
C9orf3-207ENST00000445181 LINS1Q8NG48 757 aa30.43■■■□□ 2.46
C9orf3-207ENST00000445181 POTECB2RU33 542 aa30.42■■■□□ 2.46
C9orf3-207ENST00000445181 PPEF1O14829 653 aaPredicted RBP30.42■■■□□ 2.46
C9orf3-207ENST00000445181 DDNO94850 711 aaPredicted RBP30.42■■■□□ 2.46
C9orf3-207ENST00000445181 APLP1P51693 650 aa30.42■■■□□ 2.46
C9orf3-207ENST00000445181 SLC4A10Q6U841 1118 aa30.42■■■□□ 2.46
C9orf3-207ENST00000445181 DDX60Q8IY21 1712 aaKnown RBP30.42■■■□□ 2.46
C9orf3-207ENST00000445181 IARSP41252 1262 aaKnown RBP30.41■■■□□ 2.46
C9orf3-207ENST00000445181 DDX46Q7L014 1031 aaKnown RBP30.41■■■□□ 2.46
C9orf3-207ENST00000445181 PSMD1Q99460 953 aa30.41■■■□□ 2.46
C9orf3-207ENST00000445181 PTPRCP08575 1304 aa30.41■■■□□ 2.46
C9orf3-207ENST00000445181 LAMB2P55268 1798 aa30.41■■■□□ 2.46
C9orf3-207ENST00000445181 GCKRQ14397 625 aa30.4■■■□□ 2.46
C9orf3-207ENST00000445181 SMC1BQ8NDV3 1235 aa30.4■■■□□ 2.46
C9orf3-207ENST00000445181 SNED1Q8TER0 1413 aa30.39■■■□□ 2.46
C9orf3-207ENST00000445181 WDR90Q96KV7 1748 aa30.39■■■□□ 2.46
C9orf3-207ENST00000445181 GRIPAP1Q4V328 841 aa30.39■■■□□ 2.46
C9orf3-207ENST00000445181 BEND3Q5T5X7 828 aa30.38■■■□□ 2.45
C9orf3-207ENST00000445181 SLC51AQ86UW1 340 aa30.38■■■□□ 2.45
C9orf3-207ENST00000445181 ABCC4O15439 1325 aa30.38■■■□□ 2.45
C9orf3-207ENST00000445181 RARSP54136 660 aaKnown RBP30.37■■■□□ 2.45
C9orf3-207ENST00000445181 UBE3BQ7Z3V4 1068 aa30.37■■■□□ 2.45
C9orf3-207ENST00000445181 TMX4Q9H1E5 349 aaPredicted RBP30.37■■■□□ 2.45
C9orf3-207ENST00000445181 CDHR2Q9BYE9 1310 aa30.37■■■□□ 2.45
C9orf3-207ENST00000445181 PDE8AO60658 829 aa30.36■■■□□ 2.45
C9orf3-207ENST00000445181 SF3B3Q15393 1217 aaKnown RBP30.36■■■□□ 2.45
C9orf3-207ENST00000445181 ATP6V0A2Q9Y487 856 aa30.36■■■□□ 2.45
C9orf3-207ENST00000445181 CEP350Q5VT06 3117 aa30.35■■■□□ 2.45
C9orf3-207ENST00000445181 SRCIN1Q9C0H9 1055 aa30.35■■■□□ 2.45
C9orf3-207ENST00000445181 ZNF541Q9H0D2 1346 aa30.34■■■□□ 2.45
C9orf3-207ENST00000445181 H7C1W4 665 aa30.34■■■□□ 2.45
C9orf3-207ENST00000445181 BBOX1O75936 387 aa30.34■■■□□ 2.45
C9orf3-207ENST00000445181 JDP2Q8WYK2 163 aa30.34■■■□□ 2.45
C9orf3-207ENST00000445181 GRAPQ13588 217 aa30.33■■■□□ 2.45
C9orf3-207ENST00000445181 CCDC152Q4G0S7 254 aa30.33■■■□□ 2.45
C9orf3-207ENST00000445181 GRAPLQ8TC17 118 aaPredicted RBP30.33■■■□□ 2.45
C9orf3-207ENST00000445181 NOB1Q9ULX3 412 aaKnown RBP30.33■■■□□ 2.45
C9orf3-207ENST00000445181 FZD9O00144 591 aa30.32■■■□□ 2.44
C9orf3-207ENST00000445181 ALDH1L1O75891 902 aa30.31■■■□□ 2.44
C9orf3-207ENST00000445181 L3MBTL3Q96JM7 780 aaPredicted RBP30.31■■■□□ 2.44
C9orf3-207ENST00000445181 CCDC85AQ96PX6 553 aaPredicted RBP30.31■■■□□ 2.44
C9orf3-207ENST00000445181 SP8Q8IXZ3 490 aa30.3■■■□□ 2.44
C9orf3-207ENST00000445181 LARGE2Q8N3Y3 721 aa30.3■■■□□ 2.44
C9orf3-207ENST00000445181 C9orf78Q9NZ63 289 aaPredicted RBP30.3■■■□□ 2.44
C9orf3-207ENST00000445181 IQCA1LA6NCM1 817 aa30.29■■■□□ 2.44
C9orf3-207ENST00000445181 BRPF1P55201 1214 aaPredicted RBP30.29■■■□□ 2.44
C9orf3-207ENST00000445181 CTSWP56202 376 aa30.29■■■□□ 2.44
C9orf3-207ENST00000445181 KIF16BQ96L93 1317 aa30.28■■■□□ 2.44
C9orf3-207ENST00000445181 GRM8O00222 908 aa30.27■■■□□ 2.44
C9orf3-207ENST00000445181 HTRA3P83110 453 aa30.27■■■□□ 2.44
C9orf3-207ENST00000445181 DNAJC5GQ8N7S2 189 aa30.27■■■□□ 2.44
C9orf3-207ENST00000445181 CELF1Q92879 486 aaKnown RBP30.27■■■□□ 2.44
C9orf3-207ENST00000445181 API5Q9BZZ5 524 aaKnown RBP30.27■■■□□ 2.44
C9orf3-207ENST00000445181 TAF1P21675 1872 aa30.27■■■□□ 2.44
C9orf3-207ENST00000445181 CASP7P55210 303 aa30.26■■■□□ 2.43
C9orf3-207ENST00000445181 EIF6P56537 245 aaKnown RBP30.26■■■□□ 2.43
C9orf3-207ENST00000445181 TMC4Q7Z404 712 aa30.26■■■□□ 2.43
C9orf3-207ENST00000445181 SEC31BQ9NQW1 1179 aa30.26■■■□□ 2.43
C9orf3-207ENST00000445181 PPIP5K2O43314 1243 aa30.25■■■□□ 2.43
C9orf3-207ENST00000445181 BCAR3O75815 825 aa30.25■■■□□ 2.43
C9orf3-207ENST00000445181 DPP8Q6V1X1 898 aaPredicted RBP30.25■■■□□ 2.43
C9orf3-207ENST00000445181 GPC2Q8N158 579 aa30.25■■■□□ 2.43
C9orf3-207ENST00000445181 MPNDQ8N594 471 aa30.25■■■□□ 2.43
C9orf3-207ENST00000445181 SUPT20HQ8NEM7 779 aa30.25■■■□□ 2.43
C9orf3-207ENST00000445181 TTLL11Q8NHH1 800 aa30.25■■■□□ 2.43
C9orf3-207ENST00000445181 TAF1DQ9H5J8 278 aaPredicted RBP30.25■■■□□ 2.43
C9orf3-207ENST00000445181 COL4A5P29400 1685 aa30.25■■■□□ 2.43
C9orf3-207ENST00000445181 MYH3P11055 1940 aa30.24■■■□□ 2.43
C9orf3-207ENST00000445181 POTEIP0CG38 1075 aa30.24■■■□□ 2.43
C9orf3-207ENST00000445181 POTEJP0CG39 1038 aa30.24■■■□□ 2.43
C9orf3-207ENST00000445181 CHADLQ6NUI6 762 aa30.24■■■□□ 2.43
C9orf3-207ENST00000445181 NIM1KQ8IY84 436 aa30.24■■■□□ 2.43
C9orf3-207ENST00000445181 FRAT1Q92837 279 aaPredicted RBP30.24■■■□□ 2.43
C9orf3-207ENST00000445181 PLA2G12BQ9BX93 195 aa30.24■■■□□ 2.43
C9orf3-207ENST00000445181 RTFDC1Q9BY42 306 aaPredicted RBP30.24■■■□□ 2.43
C9orf3-207ENST00000445181 RPS8P62241 208 aaKnown RBP30.23■■■□□ 2.43
C9orf3-207ENST00000445181 VPS33BQ9H267 617 aa30.23■■■□□ 2.43
C9orf3-207ENST00000445181 HACL1Q9UJ83 578 aa30.23■■■□□ 2.43
C9orf3-207ENST00000445181 GJA3Q9Y6H8 435 aa30.23■■■□□ 2.43
C9orf3-207ENST00000445181 IPO8O15397 1037 aaKnown RBP30.22■■■□□ 2.43
C9orf3-207ENST00000445181 AOC3Q16853 763 aa30.22■■■□□ 2.43
C9orf3-207ENST00000445181 GREM2Q9H772 168 aa30.22■■■□□ 2.43
C9orf3-207ENST00000445181 SCN4AP35499 1836 aa30.22■■■□□ 2.43
C9orf3-207ENST00000445181 ARHGAP45Q92619 1136 aa30.21■■■□□ 2.43
C9orf3-207ENST00000445181 CCT4P50991 539 aaKnown RBP30.2■■■□□ 2.43
C9orf3-207ENST00000445181 ANKRD18AQ8IVF6 992 aa30.2■■■□□ 2.43
C9orf3-207ENST00000445181 CDC5LQ99459 802 aaKnown RBP30.2■■■□□ 2.43
C9orf3-207ENST00000445181 EPHX2P34913 555 aa30.19■■■□□ 2.42
C9orf3-207ENST00000445181 LDHDQ86WU2 507 aa30.19■■■□□ 2.42
C9orf3-207ENST00000445181 CHMP3Q9Y3E7 222 aa30.19■■■□□ 2.42
C9orf3-207ENST00000445181 EAPPQ56P03 285 aaPredicted RBP30.18■■■□□ 2.42
C9orf3-207ENST00000445181 YTHDC1Q96MU7 727 aaKnown RBP30.18■■■□□ 2.42
C9orf3-207ENST00000445181 COL4A1P02462 1669 aa30.17■■■□□ 2.42
C9orf3-207ENST00000445181 RTL9Q8NET4 1388 aa30.17■■■□□ 2.42
C9orf3-207ENST00000445181 NBPF7P0C2Y1 421 aaPredicted RBP30.17■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms