RNA–Protein interactions for RNA: ENST00000444867.1

SEMA3D-202, Transcript of semaphorin 3D, humanhuman

TSL 1 (best) BASIC

Gene SEMA3D, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-202ENST00000444867 TICAM2Q86XR7 235 aa22.82■■□□□ 1.24
SEMA3D-202ENST00000444867 FAM89AQ96GI7 184 aa22.82■■□□□ 1.24
SEMA3D-202ENST00000444867 A0A0G2JS52 829 aa22.82■■□□□ 1.24
SEMA3D-202ENST00000444867 CRKLP46109 303 aaKnown RBP22.82■■□□□ 1.24
SEMA3D-202ENST00000444867 PALD1Q9ULE6 856 aa22.82■■□□□ 1.24
SEMA3D-202ENST00000444867 ZNF609O15014 1411 aa22.82■■□□□ 1.24
SEMA3D-202ENST00000444867 SPEF2Q9C093 1822 aa22.81■■□□□ 1.24
SEMA3D-202ENST00000444867 MYH14Q7Z406 1995 aaKnown RBP22.81■■□□□ 1.24
SEMA3D-202ENST00000444867 ZNF34Q8IZ26 560 aa22.81■■□□□ 1.24
SEMA3D-202ENST00000444867 DBNDD2Q9BQY9 259 aa22.81■■□□□ 1.24
SEMA3D-202ENST00000444867 FSD1Q9BTV5 496 aa22.81■■□□□ 1.24
SEMA3D-202ENST00000444867 GPTP24298 496 aa22.8■■□□□ 1.24
SEMA3D-202ENST00000444867 AK7Q96M32 723 aa22.8■■□□□ 1.24
SEMA3D-202ENST00000444867 USP21Q9UK80 565 aa22.8■■□□□ 1.24
SEMA3D-202ENST00000444867 NEK4P51957 841 aa22.79■■□□□ 1.24
SEMA3D-202ENST00000444867 HAUS7Q99871 368 aa22.79■■□□□ 1.24
SEMA3D-202ENST00000444867 BCORQ6W2J9 1755 aa22.79■■□□□ 1.24
SEMA3D-202ENST00000444867 IFIT5Q13325 482 aaKnown RBP22.79■■□□□ 1.24
SEMA3D-202ENST00000444867 ITPK1Q13572 414 aa22.79■■□□□ 1.24
SEMA3D-202ENST00000444867 LRRC24Q50LG9 513 aa22.79■■□□□ 1.24
SEMA3D-202ENST00000444867 ZNF594Q96JF6 807 aaPredicted RBP22.79■■□□□ 1.24
SEMA3D-202ENST00000444867 CEP126Q9P2H0 1117 aa22.79■■□□□ 1.24
SEMA3D-202ENST00000444867 TBC1D2BQ9UPU7 963 aa22.79■■□□□ 1.24
SEMA3D-202ENST00000444867 NMIQ13287 307 aaPredicted RBP22.78■■□□□ 1.24
SEMA3D-202ENST00000444867 CWC22Q9HCG8 908 aaKnown RBP22.78■■□□□ 1.24
SEMA3D-202ENST00000444867 TRMT112Q9UI30 125 aaKnown RBP22.78■■□□□ 1.24
SEMA3D-202ENST00000444867 AKAP2Q9Y2D5 859 aa22.78■■□□□ 1.24
SEMA3D-202ENST00000444867 NHSQ6T4R5 1651 aa22.77■■□□□ 1.24
SEMA3D-202ENST00000444867 PDE8AO60658 829 aa22.77■■□□□ 1.24
SEMA3D-202ENST00000444867 CTSWP56202 376 aa22.77■■□□□ 1.24
SEMA3D-202ENST00000444867 TAF7LQ5H9L4 462 aa22.77■■□□□ 1.24
SEMA3D-202ENST00000444867 LAMB2P55268 1798 aa22.77■■□□□ 1.24
SEMA3D-202ENST00000444867 CCDC171Q6TFL3 1326 aa22.76■■□□□ 1.23
SEMA3D-202ENST00000444867 IRS4O14654 1257 aaPredicted RBP22.76■■□□□ 1.23
SEMA3D-202ENST00000444867 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.76■■□□□ 1.23
SEMA3D-202ENST00000444867 KCNB2Q92953 911 aa22.76■■□□□ 1.23
SEMA3D-202ENST00000444867 MED23Q9ULK4 1368 aa22.76■■□□□ 1.23
SEMA3D-202ENST00000444867 RAB3GAP1Q15042 981 aa22.75■■□□□ 1.23
SEMA3D-202ENST00000444867 PARP10Q53GL7 1025 aa22.75■■□□□ 1.23
SEMA3D-202ENST00000444867 TTLL11Q8NHH1 800 aa22.75■■□□□ 1.23
SEMA3D-202ENST00000444867 NEUROD6Q96NK8 337 aa22.75■■□□□ 1.23
SEMA3D-202ENST00000444867 SNX14Q9Y5W7 946 aa22.75■■□□□ 1.23
SEMA3D-202ENST00000444867 UBN2Q6ZU65 1347 aa22.75■■□□□ 1.23
SEMA3D-202ENST00000444867 KCNQ2O43526 872 aa22.75■■□□□ 1.23
SEMA3D-202ENST00000444867 ZNF772Q68DY9 489 aaPredicted RBP22.75■■□□□ 1.23
SEMA3D-202ENST00000444867 PUS3Q9BZE2 481 aaKnown RBP22.75■■□□□ 1.23
SEMA3D-202ENST00000444867 RGS17Q9UGC6 210 aaPredicted RBP22.75■■□□□ 1.23
SEMA3D-202ENST00000444867 A0A1B0GUL7 405 aa22.74■■□□□ 1.23
SEMA3D-202ENST00000444867 ANKRD18BA2A2Z9 1011 aa22.74■■□□□ 1.23
SEMA3D-202ENST00000444867 CAMTA2O94983 1202 aa22.74■■□□□ 1.23
SEMA3D-202ENST00000444867 FAM227BQ96M60 508 aa22.74■■□□□ 1.23
SEMA3D-202ENST00000444867 BTAF1O14981 1849 aa22.74■■□□□ 1.23
SEMA3D-202ENST00000444867 RGL2O15211 777 aa22.73■■□□□ 1.23
SEMA3D-202ENST00000444867 HSP90B1P14625 803 aaKnown RBP22.73■■□□□ 1.23
SEMA3D-202ENST00000444867 MCM4P33991 863 aa22.73■■□□□ 1.23
SEMA3D-202ENST00000444867 LRP5O75197 1615 aa22.73■■□□□ 1.23
SEMA3D-202ENST00000444867 TIMM10P62072 90 aa22.72■■□□□ 1.23
SEMA3D-202ENST00000444867 PTH1RQ03431 593 aa22.72■■□□□ 1.23
SEMA3D-202ENST00000444867 MAP4K1Q92918 833 aa22.72■■□□□ 1.23
SEMA3D-202ENST00000444867 DDX60Q8IY21 1712 aaKnown RBP22.72■■□□□ 1.23
SEMA3D-202ENST00000444867 A0A0D9SFI3 127 aa22.71■■□□□ 1.23
SEMA3D-202ENST00000444867 ITGA6P23229 1130 aa22.71■■□□□ 1.23
SEMA3D-202ENST00000444867 NUCB2P80303 420 aa22.71■■□□□ 1.23
SEMA3D-202ENST00000444867 SYNE4Q8N205 404 aa22.71■■□□□ 1.23
SEMA3D-202ENST00000444867 KBTBD3Q8NAB2 608 aa22.71■■□□□ 1.23
SEMA3D-202ENST00000444867 DNAJC2Q99543 621 aaKnown RBP22.71■■□□□ 1.23
SEMA3D-202ENST00000444867 TM6SF1Q9BZW5 370 aa22.71■■□□□ 1.23
SEMA3D-202ENST00000444867 FOXD4L1Q9NU39 408 aa22.71■■□□□ 1.23
SEMA3D-202ENST00000444867 ZNF652Q9Y2D9 606 aa22.71■■□□□ 1.23
SEMA3D-202ENST00000444867 SH3TC1Q8TE82 1336 aa22.71■■□□□ 1.23
SEMA3D-202ENST00000444867 ABCC12Q96J65 1359 aa22.71■■□□□ 1.23
SEMA3D-202ENST00000444867 CUL4AQ13619 759 aa22.71■■□□□ 1.23
SEMA3D-202ENST00000444867 NECTIN1Q15223 517 aa22.71■■□□□ 1.23
SEMA3D-202ENST00000444867 TMX3Q96JJ7 454 aa22.71■■□□□ 1.23
SEMA3D-202ENST00000444867 UTP14AQ9BVJ6 771 aaKnown RBP22.71■■□□□ 1.23
SEMA3D-202ENST00000444867 GREM2Q9H772 168 aa22.71■■□□□ 1.23
SEMA3D-202ENST00000444867 RIC1Q4ADV7 1423 aa22.7■■□□□ 1.23
SEMA3D-202ENST00000444867 CNTNAP4Q9C0A0 1308 aa22.7■■□□□ 1.22
SEMA3D-202ENST00000444867 GBP4Q96PP9 640 aa22.7■■□□□ 1.22
SEMA3D-202ENST00000444867 QTRT2Q9H974 415 aaKnown RBP22.7■■□□□ 1.22
SEMA3D-202ENST00000444867 RIPOR2Q9Y4F9 1068 aa22.7■■□□□ 1.22
SEMA3D-202ENST00000444867 ATRNO75882 1429 aa22.7■■□□□ 1.22
SEMA3D-202ENST00000444867 DDX11L8A8MPP1 907 aa22.69■■□□□ 1.22
SEMA3D-202ENST00000444867 ZKSCAN1P17029 563 aaPredicted RBP22.69■■□□□ 1.22
SEMA3D-202ENST00000444867 CCDC158Q5M9N0 1113 aa22.69■■□□□ 1.22
SEMA3D-202ENST00000444867 CLEC4GQ6UXB4 293 aa22.69■■□□□ 1.22
SEMA3D-202ENST00000444867 TNPO1Q92973 898 aaKnown RBP22.69■■□□□ 1.22
SEMA3D-202ENST00000444867 EDC3Q96F86 508 aaKnown RBP22.69■■□□□ 1.22
SEMA3D-202ENST00000444867 INTS4Q96HW7 963 aaKnown RBP22.69■■□□□ 1.22
SEMA3D-202ENST00000444867 PAG1Q9NWQ8 432 aa22.69■■□□□ 1.22
SEMA3D-202ENST00000444867 TRPC5Q9UL62 973 aaPredicted RBP22.69■■□□□ 1.22
SEMA3D-202ENST00000444867 RBM8AQ9Y5S9 174 aaKnown RBP22.69■■□□□ 1.22
SEMA3D-202ENST00000444867 SCN7AQ01118 1682 aa22.68■■□□□ 1.22
SEMA3D-202ENST00000444867 IFIT1P09914 478 aaKnown RBP22.68■■□□□ 1.22
SEMA3D-202ENST00000444867 DEKP35659 375 aaKnown RBP22.68■■□□□ 1.22
SEMA3D-202ENST00000444867 SUSD4Q5VX71 490 aa22.68■■□□□ 1.22
SEMA3D-202ENST00000444867 POTEAQ6S8J7 498 aa22.68■■□□□ 1.22
SEMA3D-202ENST00000444867 LDHAL6AQ6ZMR3 332 aa22.68■■□□□ 1.22
SEMA3D-202ENST00000444867 RASEFQ8IZ41 740 aa22.68■■□□□ 1.22
SEMA3D-202ENST00000444867 CCDC85AQ96PX6 553 aaPredicted RBP22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms