RNA–Protein interactions for RNA: ENST00000444408.1

AP1S3-207, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 4

Gene AP1S3, Length 561 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-207ENST00000444408 RBM17Q96I25 401 aaKnown RBP21.72■■□□□ 1.07
AP1S3-207ENST00000444408 ABCC4O15439 1325 aa21.72■■□□□ 1.07
AP1S3-207ENST00000444408 ZNF526Q8TF50 670 aaPredicted RBP21.71■■□□□ 1.07
AP1S3-207ENST00000444408 ARHGAP45Q92619 1136 aa21.71■■□□□ 1.07
AP1S3-207ENST00000444408 CRAMP1Q96RY5 1269 aa21.71■■□□□ 1.07
AP1S3-207ENST00000444408 SEC31BQ9NQW1 1179 aa21.71■■□□□ 1.07
AP1S3-207ENST00000444408 NBPF7P0C2Y1 421 aaPredicted RBP21.7■■□□□ 1.06
AP1S3-207ENST00000444408 ALDH1B1P30837 517 aa21.7■■□□□ 1.06
AP1S3-207ENST00000444408 CTSWP56202 376 aa21.7■■□□□ 1.06
AP1S3-207ENST00000444408 EPHA10Q5JZY3 1008 aa21.7■■□□□ 1.06
AP1S3-207ENST00000444408 ATF7IPQ6VMQ6 1270 aa21.7■■□□□ 1.06
AP1S3-207ENST00000444408 C9orf78Q9NZ63 289 aaPredicted RBP21.7■■□□□ 1.06
AP1S3-207ENST00000444408 RCAN3Q9UKA8 241 aa21.7■■□□□ 1.06
AP1S3-207ENST00000444408 ARFGEF1Q9Y6D6 1849 aa21.7■■□□□ 1.06
AP1S3-207ENST00000444408 TAF1P21675 1872 aa21.69■■□□□ 1.06
AP1S3-207ENST00000444408 RASSF7Q02833 373 aa21.69■■□□□ 1.06
AP1S3-207ENST00000444408 CELF1Q92879 486 aaKnown RBP21.69■■□□□ 1.06
AP1S3-207ENST00000444408 IPO8O15397 1037 aaKnown RBP21.68■■□□□ 1.06
AP1S3-207ENST00000444408 PRELPP51888 382 aa21.68■■□□□ 1.06
AP1S3-207ENST00000444408 FOXO4P98177 505 aa21.68■■□□□ 1.06
AP1S3-207ENST00000444408 DDX46Q7L014 1031 aaKnown RBP21.68■■□□□ 1.06
AP1S3-207ENST00000444408 TTLL11Q8NHH1 800 aa21.68■■□□□ 1.06
AP1S3-207ENST00000444408 SUCLG2Q96I99 432 aa21.68■■□□□ 1.06
AP1S3-207ENST00000444408 USP44Q9H0E7 712 aa21.68■■□□□ 1.06
AP1S3-207ENST00000444408 NFKBIEO00221 500 aa21.67■■□□□ 1.06
AP1S3-207ENST00000444408 PPEF1O14829 653 aaPredicted RBP21.67■■□□□ 1.06
AP1S3-207ENST00000444408 ZKSCAN2Q63HK3 967 aa21.67■■□□□ 1.06
AP1S3-207ENST00000444408 KAZALD1Q96I82 304 aa21.67■■□□□ 1.06
AP1S3-207ENST00000444408 PLA2G12BQ9BX93 195 aa21.67■■□□□ 1.06
AP1S3-207ENST00000444408 GREM2Q9H772 168 aa21.67■■□□□ 1.06
AP1S3-207ENST00000444408 UTYO14607 1347 aa21.66■■□□□ 1.06
AP1S3-207ENST00000444408 RLBP1P12271 317 aa21.66■■□□□ 1.06
AP1S3-207ENST00000444408 CCT4P50991 539 aaKnown RBP21.66■■□□□ 1.06
AP1S3-207ENST00000444408 GRAPQ13588 217 aa21.66■■□□□ 1.06
AP1S3-207ENST00000444408 GRAPLQ8TC17 118 aaPredicted RBP21.66■■□□□ 1.06
AP1S3-207ENST00000444408 PLIN1O60240 522 aa21.65■■□□□ 1.06
AP1S3-207ENST00000444408 HSP90B1P14625 803 aaKnown RBP21.65■■□□□ 1.06
AP1S3-207ENST00000444408 CCDC152Q4G0S7 254 aa21.65■■□□□ 1.06
AP1S3-207ENST00000444408 INTS3Q68E01 1043 aaKnown RBP21.65■■□□□ 1.06
AP1S3-207ENST00000444408 CSF1RP07333 972 aa21.64■■□□□ 1.05
AP1S3-207ENST00000444408 FAM161AQ3B820 660 aa21.64■■□□□ 1.05
AP1S3-207ENST00000444408 TMEM57Q8N5G2 664 aa21.64■■□□□ 1.05
AP1S3-207ENST00000444408 SNED1Q8TER0 1413 aa21.63■■□□□ 1.05
AP1S3-207ENST00000444408 CCDC93Q567U6 631 aa21.63■■□□□ 1.05
AP1S3-207ENST00000444408 LMBR1LQ6UX01 489 aa21.63■■□□□ 1.05
AP1S3-207ENST00000444408 MEIS3Q99687 375 aa21.63■■□□□ 1.05
AP1S3-207ENST00000444408 KIF3CO14782 793 aa21.62■■□□□ 1.05
AP1S3-207ENST00000444408 PANK1Q8TE04 598 aa21.62■■□□□ 1.05
AP1S3-207ENST00000444408 ATP6V0A2Q9Y487 856 aa21.62■■□□□ 1.05
AP1S3-207ENST00000444408 BBOX1O75936 387 aa21.61■■□□□ 1.05
AP1S3-207ENST00000444408 RPS8P62241 208 aaKnown RBP21.61■■□□□ 1.05
AP1S3-207ENST00000444408 DZIP1LQ8IYY4 767 aaKnown RBP21.61■■□□□ 1.05
AP1S3-207ENST00000444408 BICC1Q9H694 974 aaKnown RBP21.61■■□□□ 1.05
AP1S3-207ENST00000444408 ITGA6P23229 1130 aa21.6■■□□□ 1.05
AP1S3-207ENST00000444408 ANKRD44Q8N8A2 993 aa21.6■■□□□ 1.05
AP1S3-207ENST00000444408 CHMP3Q9Y3E7 222 aa21.6■■□□□ 1.05
AP1S3-207ENST00000444408 RTL9Q8NET4 1388 aa21.6■■□□□ 1.05
AP1S3-207ENST00000444408 MYH3P11055 1940 aa21.59■■□□□ 1.05
AP1S3-207ENST00000444408 FER1L6Q2WGJ9 1857 aa21.59■■□□□ 1.05
AP1S3-207ENST00000444408 C9orf131Q5VYM1 1079 aa21.59■■□□□ 1.05
AP1S3-207ENST00000444408 SP8Q8IXZ3 490 aa21.59■■□□□ 1.05
AP1S3-207ENST00000444408 SOGA3Q5TF21 947 aa21.58■■□□□ 1.05
AP1S3-207ENST00000444408 FTSJ3Q8IY81 847 aaKnown RBP21.58■■□□□ 1.05
AP1S3-207ENST00000444408 TAOK3Q9H2K8 898 aa21.58■■□□□ 1.05
AP1S3-207ENST00000444408 ZNF277Q9NRM2 450 aaPredicted RBP21.58■■□□□ 1.05
AP1S3-207ENST00000444408 UBTFL1P0CB47 393 aaPredicted RBP21.57■■□□□ 1.04
AP1S3-207ENST00000444408 FKBP4Q02790 459 aaKnown RBP eCLIP21.57■■□□□ 1.04
AP1S3-207ENST00000444408 ANKRD18AQ8IVF6 992 aa21.57■■□□□ 1.04
AP1S3-207ENST00000444408 ZNF594Q96JF6 807 aaPredicted RBP21.57■■□□□ 1.04
AP1S3-207ENST00000444408 RNF181Q9P0P0 153 aa21.57■■□□□ 1.04
AP1S3-207ENST00000444408 APLP1P51693 650 aa21.56■■□□□ 1.04
AP1S3-207ENST00000444408 GPSM2P81274 684 aa21.56■■□□□ 1.04
AP1S3-207ENST00000444408 RABL6Q3YEC7 729 aaPredicted RBP21.56■■□□□ 1.04
AP1S3-207ENST00000444408 C20orf194Q5TEA3 1177 aa21.56■■□□□ 1.04
AP1S3-207ENST00000444408 RTKN2Q8IZC4 609 aa21.56■■□□□ 1.04
AP1S3-207ENST00000444408 LRRFIP2Q9Y608 721 aaKnown RBP21.56■■□□□ 1.04
AP1S3-207ENST00000444408 LTBP3Q9NS15 1303 aa21.55■■□□□ 1.04
AP1S3-207ENST00000444408 LMNB1P20700 586 aa21.55■■□□□ 1.04
AP1S3-207ENST00000444408 CC2D2BQ6DHV5 1058 aa21.55■■□□□ 1.04
AP1S3-207ENST00000444408 ITPRIPQ8IWB1 547 aa21.55■■□□□ 1.04
AP1S3-207ENST00000444408 CDC5LQ99459 802 aaKnown RBP21.55■■□□□ 1.04
AP1S3-207ENST00000444408 LRRC37AA6NMS7 1700 aa21.55■■□□□ 1.04
AP1S3-207ENST00000444408 ANKRD18BA2A2Z9 1011 aa21.54■■□□□ 1.04
AP1S3-207ENST00000444408 WTIPA6NIX2 430 aaPredicted RBP21.54■■□□□ 1.04
AP1S3-207ENST00000444408 TOMM70O94826 608 aa21.54■■□□□ 1.04
AP1S3-207ENST00000444408 IFIT5Q13325 482 aaKnown RBP21.54■■□□□ 1.04
AP1S3-207ENST00000444408 MPNDQ8N594 471 aa21.54■■□□□ 1.04
AP1S3-207ENST00000444408 GPR101Q96P66 508 aaPredicted RBP21.54■■□□□ 1.04
AP1S3-207ENST00000444408 DUOX1Q9NRD9 1551 aa21.53■■□□□ 1.04
AP1S3-207ENST00000444408 SPEF2Q9C093 1822 aa21.53■■□□□ 1.04
AP1S3-207ENST00000444408 DPP8Q6V1X1 898 aaPredicted RBP21.53■■□□□ 1.04
AP1S3-207ENST00000444408 TMC4Q7Z404 712 aa21.53■■□□□ 1.04
AP1S3-207ENST00000444408 PSMD1Q99460 953 aa21.53■■□□□ 1.04
AP1S3-207ENST00000444408 NSFL1CQ9UNZ2 370 aaKnown RBP21.53■■□□□ 1.04
AP1S3-207ENST00000444408 SBF1O95248 1867 aa21.53■■□□□ 1.04
AP1S3-207ENST00000444408 CCDC57Q2TAC2 916 aa21.52■■□□□ 1.04
AP1S3-207ENST00000444408 KLHDC4Q8TBB5 520 aa21.52■■□□□ 1.04
AP1S3-207ENST00000444408 TMX4Q9H1E5 349 aaPredicted RBP21.52■■□□□ 1.04
AP1S3-207ENST00000444408 BSDC1Q9NW68 430 aaPredicted RBP21.52■■□□□ 1.04
AP1S3-207ENST00000444408 COG6Q9Y2V7 657 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms