RNA–Protein interactions for RNA: ENST00000442667.2

CDCA4P1-201, Transcript of cell division cycle associated 4 pseudogene 1, humanhuman

BASIC

Gene CDCA4P1, Length 624 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4P1-201ENST00000442667 RPGRQ92834 1020 aaKnown RBP12.8□□□□□ -0.36
CDCA4P1-201ENST00000442667 RBM17Q96I25 401 aaKnown RBP12.8□□□□□ -0.36
CDCA4P1-201ENST00000442667 CRAMP1Q96RY5 1269 aa12.8□□□□□ -0.36
CDCA4P1-201ENST00000442667 BICC1Q9H694 974 aaKnown RBP12.8□□□□□ -0.36
CDCA4P1-201ENST00000442667 GREM2Q9H772 168 aa12.8□□□□□ -0.36
CDCA4P1-201ENST00000442667 PIM2Q9P1W9 311 aa12.8□□□□□ -0.36
CDCA4P1-201ENST00000442667 DDX19BQ9UMR2 479 aa12.8□□□□□ -0.36
CDCA4P1-201ENST00000442667 HDAC5Q9UQL6 1122 aa12.8□□□□□ -0.36
CDCA4P1-201ENST00000442667 LRRFIP2Q9Y608 721 aaKnown RBP12.8□□□□□ -0.36
CDCA4P1-201ENST00000442667 GNAI2P04899 355 aa12.79□□□□□ -0.36
CDCA4P1-201ENST00000442667 RABL6Q3YEC7 729 aaPredicted RBP12.79□□□□□ -0.36
CDCA4P1-201ENST00000442667 DDX46Q7L014 1031 aaKnown RBP12.79□□□□□ -0.36
CDCA4P1-201ENST00000442667 TTLL6Q8N841 843 aa12.79□□□□□ -0.36
CDCA4P1-201ENST00000442667 CNKSR1Q969H4 720 aa12.79□□□□□ -0.36
CDCA4P1-201ENST00000442667 SEC31BQ9NQW1 1179 aa12.79□□□□□ -0.36
CDCA4P1-201ENST00000442667 WWC3Q9ULE0 1092 aa12.79□□□□□ -0.36
CDCA4P1-201ENST00000442667 LRP5O75197 1615 aa12.79□□□□□ -0.36
CDCA4P1-201ENST00000442667 ALDH1B1P30837 517 aa12.78□□□□□ -0.36
CDCA4P1-201ENST00000442667 FAM161AQ3B820 660 aa12.78□□□□□ -0.36
CDCA4P1-201ENST00000442667 DALRD3Q5D0E6 543 aaKnown RBP12.78□□□□□ -0.36
CDCA4P1-201ENST00000442667 CELF1Q92879 486 aaKnown RBP12.78□□□□□ -0.36
CDCA4P1-201ENST00000442667 CRBNQ96SW2 442 aa12.78□□□□□ -0.36
CDCA4P1-201ENST00000442667 ZBTB40Q9NUA8 1239 aa12.78□□□□□ -0.36
CDCA4P1-201ENST00000442667 CHMP3Q9Y3E7 222 aa12.78□□□□□ -0.36
CDCA4P1-201ENST00000442667 GRAPQ13588 217 aa12.77□□□□□ -0.37
CDCA4P1-201ENST00000442667 GRAPLQ8TC17 118 aaPredicted RBP12.77□□□□□ -0.37
CDCA4P1-201ENST00000442667 CHMP4BQ9H444 224 aaKnown RBP12.77□□□□□ -0.37
CDCA4P1-201ENST00000442667 C1orf115Q9H7X2 142 aa12.77□□□□□ -0.37
CDCA4P1-201ENST00000442667 RTL9Q8NET4 1388 aa12.77□□□□□ -0.37
CDCA4P1-201ENST00000442667 ANKRD36CQ5JPF3 1778 aa12.76□□□□□ -0.37
CDCA4P1-201ENST00000442667 AFDNP55196 1824 aaKnown RBP12.76□□□□□ -0.37
CDCA4P1-201ENST00000442667 BBOX1O75936 387 aa12.76□□□□□ -0.37
CDCA4P1-201ENST00000442667 ITGA6P23229 1130 aa12.76□□□□□ -0.37
CDCA4P1-201ENST00000442667 RPS8P62241 208 aaKnown RBP12.76□□□□□ -0.37
CDCA4P1-201ENST00000442667 PRPF40BQ6NWY9 871 aaKnown RBP12.76□□□□□ -0.37
CDCA4P1-201ENST00000442667 C7orf43Q8WVR3 580 aa12.76□□□□□ -0.37
CDCA4P1-201ENST00000442667 BCS1LQ9Y276 419 aa12.76□□□□□ -0.37
CDCA4P1-201ENST00000442667 ANKRD18BA2A2Z9 1011 aa12.75□□□□□ -0.37
CDCA4P1-201ENST00000442667 IFIT5Q13325 482 aaKnown RBP12.75□□□□□ -0.37
CDCA4P1-201ENST00000442667 MTX1Q13505 466 aa12.75□□□□□ -0.37
CDCA4P1-201ENST00000442667 CCDC57Q2TAC2 916 aa12.75□□□□□ -0.37
CDCA4P1-201ENST00000442667 CDC5LQ99459 802 aaKnown RBP12.75□□□□□ -0.37
CDCA4P1-201ENST00000442667 PPEF1O14829 653 aaPredicted RBP12.74□□□□□ -0.37
CDCA4P1-201ENST00000442667 C21orf2O43822 256 aa12.74□□□□□ -0.37
CDCA4P1-201ENST00000442667 YBX3P16989 372 aaKnown RBP eCLIP12.74□□□□□ -0.37
CDCA4P1-201ENST00000442667 RFX5P48382 616 aaPredicted RBP12.74□□□□□ -0.37
CDCA4P1-201ENST00000442667 ATP8B2P98198 1209 aa12.74□□□□□ -0.37
CDCA4P1-201ENST00000442667 SLC51AQ86UW1 340 aa12.74□□□□□ -0.37
CDCA4P1-201ENST00000442667 ANKRD18AQ8IVF6 992 aa12.74□□□□□ -0.37
CDCA4P1-201ENST00000442667 ZNF594Q96JF6 807 aaPredicted RBP12.74□□□□□ -0.37
CDCA4P1-201ENST00000442667 ZNF219Q9P2Y4 722 aaPredicted RBP12.74□□□□□ -0.37
CDCA4P1-201ENST00000442667 TNRC6CQ9HCJ0 1690 aaKnown RBP12.73□□□□□ -0.37
CDCA4P1-201ENST00000442667 IGHMBP2P38935 993 aaKnown RBP12.73□□□□□ -0.37
CDCA4P1-201ENST00000442667 IRX6P78412 446 aaPredicted RBP12.73□□□□□ -0.37
CDCA4P1-201ENST00000442667 CEP85Q6P2H3 762 aa12.73□□□□□ -0.37
CDCA4P1-201ENST00000442667 OLFM4Q6UX06 510 aa12.73□□□□□ -0.37
CDCA4P1-201ENST00000442667 SP8Q8IXZ3 490 aa12.73□□□□□ -0.37
CDCA4P1-201ENST00000442667 PELP1Q8IZL8 1130 aaKnown RBP12.73□□□□□ -0.37
CDCA4P1-201ENST00000442667 EXOC6Q8TAG9 804 aa12.73□□□□□ -0.37
CDCA4P1-201ENST00000442667 ATP6V0A2Q9Y487 856 aa12.73□□□□□ -0.37
CDCA4P1-201ENST00000442667 ANKRD31Q8N7Z5 1873 aa12.72□□□□□ -0.37
CDCA4P1-201ENST00000442667 PNMA6EA0A0J9YXQ4 647 aa12.72□□□□□ -0.37
CDCA4P1-201ENST00000442667 SRGAP3O43295 1099 aa12.72□□□□□ -0.37
CDCA4P1-201ENST00000442667 PTPN12Q05209 780 aaKnown RBP12.72□□□□□ -0.37
CDCA4P1-201ENST00000442667 GPR162Q16538 588 aa12.72□□□□□ -0.37
CDCA4P1-201ENST00000442667 TAF7LQ5H9L4 462 aa12.72□□□□□ -0.37
CDCA4P1-201ENST00000442667 TMC4Q7Z404 712 aa12.72□□□□□ -0.37
CDCA4P1-201ENST00000442667 KLHDC4Q8TBB5 520 aa12.72□□□□□ -0.37
CDCA4P1-201ENST00000442667 BSDC1Q9NW68 430 aaPredicted RBP12.72□□□□□ -0.37
CDCA4P1-201ENST00000442667 POLA2Q14181 598 aa12.71□□□□□ -0.37
CDCA4P1-201ENST00000442667 CC2D2BQ6DHV5 1058 aa12.71□□□□□ -0.37
CDCA4P1-201ENST00000442667 LDHAL6AQ6ZMR3 332 aa12.71□□□□□ -0.37
CDCA4P1-201ENST00000442667 SIRT2Q8IXJ6 389 aa12.71□□□□□ -0.37
CDCA4P1-201ENST00000442667 RPAP2Q8IXW5 612 aaPredicted RBP12.71□□□□□ -0.37
CDCA4P1-201ENST00000442667 MPHOSPH8Q99549 860 aa12.71□□□□□ -0.37
CDCA4P1-201ENST00000442667 PUS3Q9BZE2 481 aaKnown RBP12.71□□□□□ -0.37
CDCA4P1-201ENST00000442667 KIF13BQ9NQT8 1826 aa12.71□□□□□ -0.38
CDCA4P1-201ENST00000442667 CCDC93Q567U6 631 aa12.7□□□□□ -0.38
CDCA4P1-201ENST00000442667 SOGA3Q5TF21 947 aa12.7□□□□□ -0.38
CDCA4P1-201ENST00000442667 SSH3Q8TE77 659 aa12.7□□□□□ -0.38
CDCA4P1-201ENST00000442667 TMX4Q9H1E5 349 aaPredicted RBP12.7□□□□□ -0.38
CDCA4P1-201ENST00000442667 COPRSQ9NQ92 184 aa12.7□□□□□ -0.38
CDCA4P1-201ENST00000442667 MINPP1Q9UNW1 487 aa12.7□□□□□ -0.38
CDCA4P1-201ENST00000442667 PA2G4Q9UQ80 394 aaKnown RBP12.7□□□□□ -0.38
CDCA4P1-201ENST00000442667 RIPOR2Q9Y4F9 1068 aa12.7□□□□□ -0.38
CDCA4P1-201ENST00000442667 PCDHB15Q9Y5E8 787 aa12.7□□□□□ -0.38
CDCA4P1-201ENST00000442667 DDX60Q8IY21 1712 aaKnown RBP12.69□□□□□ -0.38
CDCA4P1-201ENST00000442667 KIAA1551Q9HCM1 1747 aa12.69□□□□□ -0.38
CDCA4P1-201ENST00000442667 EYA2O00167 538 aa12.69□□□□□ -0.38
CDCA4P1-201ENST00000442667 GRIN3BO60391 1043 aa12.69□□□□□ -0.38
CDCA4P1-201ENST00000442667 LRRC24Q50LG9 513 aa12.69□□□□□ -0.38
CDCA4P1-201ENST00000442667 ARHGAP27Q6ZUM4 889 aa12.69□□□□□ -0.38
CDCA4P1-201ENST00000442667 CNNM1Q9NRU3 951 aa12.69□□□□□ -0.38
CDCA4P1-201ENST00000442667 COL4A1P02462 1669 aa12.68□□□□□ -0.38
CDCA4P1-201ENST00000442667 GPSM2P81274 684 aa12.68□□□□□ -0.38
CDCA4P1-201ENST00000442667 AAMPQ13685 434 aa12.68□□□□□ -0.38
CDCA4P1-201ENST00000442667 RTKN2Q8IZC4 609 aa12.68□□□□□ -0.38
CDCA4P1-201ENST00000442667 MPNDQ8N594 471 aa12.68□□□□□ -0.38
CDCA4P1-201ENST00000442667 SIL1Q9H173 461 aa12.68□□□□□ -0.38
CDCA4P1-201ENST00000442667 NSFL1CQ9UNZ2 370 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms