RNA–Protein interactions for RNA: ENST00000441983.5

TRAPPC12-210, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-210ENST00000441983 CHRNA5P30532 468 aa19.02■□□□□ 0.64
TRAPPC12-210ENST00000441983 TMC4Q7Z404 712 aa19.02■□□□□ 0.64
TRAPPC12-210ENST00000441983 TTLL6Q8N841 843 aa19.02■□□□□ 0.64
TRAPPC12-210ENST00000441983 DDX19BQ9UMR2 479 aa19.02■□□□□ 0.64
TRAPPC12-210ENST00000441983 A0A0G2JLW4 131 aa19.01■□□□□ 0.63
TRAPPC12-210ENST00000441983 CSF1RP07333 972 aa19.01■□□□□ 0.63
TRAPPC12-210ENST00000441983 RLBP1P12271 317 aa19.01■□□□□ 0.63
TRAPPC12-210ENST00000441983 MVPQ14764 893 aaKnown RBP19.01■□□□□ 0.63
TRAPPC12-210ENST00000441983 RTL5Q5HYW3 569 aaPredicted RBP19.01■□□□□ 0.63
TRAPPC12-210ENST00000441983 DDX46Q7L014 1031 aaKnown RBP19.01■□□□□ 0.63
TRAPPC12-210ENST00000441983 ITPRIPQ8IWB1 547 aa19.01■□□□□ 0.63
TRAPPC12-210ENST00000441983 TNNQ9UQP3 1299 aa19.01■□□□□ 0.63
TRAPPC12-210ENST00000441983 SLX4Q8IY92 1834 aa19.01■□□□□ 0.63
TRAPPC12-210ENST00000441983 RABL6Q3YEC7 729 aaPredicted RBP19■□□□□ 0.63
TRAPPC12-210ENST00000441983 DALRD3Q5D0E6 543 aaKnown RBP19■□□□□ 0.63
TRAPPC12-210ENST00000441983 SOGA3Q5TF21 947 aa19■□□□□ 0.63
TRAPPC12-210ENST00000441983 C3orf67Q6ZVT6 689 aa19■□□□□ 0.63
TRAPPC12-210ENST00000441983 TTLL11Q8NHH1 800 aa19■□□□□ 0.63
TRAPPC12-210ENST00000441983 FOXO4P98177 505 aa18.99■□□□□ 0.63
TRAPPC12-210ENST00000441983 GRAPQ13588 217 aa18.99■□□□□ 0.63
TRAPPC12-210ENST00000441983 GRAPLQ8TC17 118 aaPredicted RBP18.99■□□□□ 0.63
TRAPPC12-210ENST00000441983 PANK1Q8TE04 598 aa18.99■□□□□ 0.63
TRAPPC12-210ENST00000441983 ZNF622Q969S3 477 aaKnown RBP eCLIP18.99■□□□□ 0.63
TRAPPC12-210ENST00000441983 SPEF2Q9C093 1822 aa18.99■□□□□ 0.63
TRAPPC12-210ENST00000441983 PLIN1O60240 522 aa18.98■□□□□ 0.63
TRAPPC12-210ENST00000441983 GRIPAP1Q4V328 841 aa18.98■□□□□ 0.63
TRAPPC12-210ENST00000441983 SUCLG2Q96I99 432 aa18.98■□□□□ 0.63
TRAPPC12-210ENST00000441983 CDC5LQ99459 802 aaKnown RBP18.98■□□□□ 0.63
TRAPPC12-210ENST00000441983 MEIS3Q99687 375 aa18.98■□□□□ 0.63
TRAPPC12-210ENST00000441983 FER1L6Q2WGJ9 1857 aa18.98■□□□□ 0.63
TRAPPC12-210ENST00000441983 TAF1P21675 1872 aa18.97■□□□□ 0.63
TRAPPC12-210ENST00000441983 BBOX1O75936 387 aa18.97■□□□□ 0.63
TRAPPC12-210ENST00000441983 GNAI2P04899 355 aa18.97■□□□□ 0.63
TRAPPC12-210ENST00000441983 CC2D2BQ6DHV5 1058 aa18.97■□□□□ 0.63
TRAPPC12-210ENST00000441983 PRPF40BQ6NWY9 871 aaKnown RBP18.97■□□□□ 0.63
TRAPPC12-210ENST00000441983 JARID2Q92833 1246 aaPredicted RBP18.97■□□□□ 0.63
TRAPPC12-210ENST00000441983 KAZALD1Q96I82 304 aa18.97■□□□□ 0.63
TRAPPC12-210ENST00000441983 ZBTB7BO15156 539 aaPredicted RBP18.96■□□□□ 0.63
TRAPPC12-210ENST00000441983 CENPBP07199 599 aaPredicted RBP18.96■□□□□ 0.63
TRAPPC12-210ENST00000441983 BICC1Q9H694 974 aaKnown RBP18.96■□□□□ 0.63
TRAPPC12-210ENST00000441983 A0A1B0GUL6 1792 aa18.96■□□□□ 0.63
TRAPPC12-210ENST00000441983 DCAF8L1A6NGE4 600 aa18.95■□□□□ 0.62
TRAPPC12-210ENST00000441983 MTX1Q13505 466 aa18.95■□□□□ 0.62
TRAPPC12-210ENST00000441983 LMBR1LQ6UX01 489 aa18.95■□□□□ 0.62
TRAPPC12-210ENST00000441983 GREM2Q9H772 168 aa18.95■□□□□ 0.62
TRAPPC12-210ENST00000441983 LTBP1Q14766 1721 aa18.94■□□□□ 0.62
TRAPPC12-210ENST00000441983 PPEF1O14829 653 aaPredicted RBP18.94■□□□□ 0.62
TRAPPC12-210ENST00000441983 GRIN3BO60391 1043 aa18.94■□□□□ 0.62
TRAPPC12-210ENST00000441983 IFIT5Q13325 482 aaKnown RBP18.94■□□□□ 0.62
TRAPPC12-210ENST00000441983 AAMPQ13685 434 aa18.94■□□□□ 0.62
TRAPPC12-210ENST00000441983 FAM161AQ3B820 660 aa18.94■□□□□ 0.62
TRAPPC12-210ENST00000441983 EPHA10Q5JZY3 1008 aa18.94■□□□□ 0.62
TRAPPC12-210ENST00000441983 ANKRD44Q8N8A2 993 aa18.94■□□□□ 0.62
TRAPPC12-210ENST00000441983 BCS1LQ9Y276 419 aa18.94■□□□□ 0.62
TRAPPC12-210ENST00000441983 COG6Q9Y2V7 657 aa18.94■□□□□ 0.62
TRAPPC12-210ENST00000441983 LRRFIP2Q9Y608 721 aaKnown RBP18.94■□□□□ 0.62
TRAPPC12-210ENST00000441983 SNED1Q8TER0 1413 aa18.93■□□□□ 0.62
TRAPPC12-210ENST00000441983 ANKRD18BA2A2Z9 1011 aa18.93■□□□□ 0.62
TRAPPC12-210ENST00000441983 ITGA6P23229 1130 aa18.93■□□□□ 0.62
TRAPPC12-210ENST00000441983 CCDC57Q2TAC2 916 aa18.93■□□□□ 0.62
TRAPPC12-210ENST00000441983 TMX4Q9H1E5 349 aaPredicted RBP18.93■□□□□ 0.62
TRAPPC12-210ENST00000441983 ATP6V0A2Q9Y487 856 aa18.93■□□□□ 0.62
TRAPPC12-210ENST00000441983 COL4A1P02462 1669 aa18.92■□□□□ 0.62
TRAPPC12-210ENST00000441983 IGHMBP2P38935 993 aaKnown RBP18.92■□□□□ 0.62
TRAPPC12-210ENST00000441983 RPS8P62241 208 aaKnown RBP18.92■□□□□ 0.62
TRAPPC12-210ENST00000441983 C20orf194Q5TEA3 1177 aa18.92■□□□□ 0.62
TRAPPC12-210ENST00000441983 ANKRD18AQ8IVF6 992 aa18.92■□□□□ 0.62
TRAPPC12-210ENST00000441983 SP8Q8IXZ3 490 aa18.92■□□□□ 0.62
TRAPPC12-210ENST00000441983 C7orf43Q8WVR3 580 aa18.92■□□□□ 0.62
TRAPPC12-210ENST00000441983 CCDC93Q567U6 631 aa18.91■□□□□ 0.62
TRAPPC12-210ENST00000441983 CELF1Q92879 486 aaKnown RBP18.91■□□□□ 0.62
TRAPPC12-210ENST00000441983 ZBTB40Q9NUA8 1239 aa18.91■□□□□ 0.62
TRAPPC12-210ENST00000441983 BSDC1Q9NW68 430 aaPredicted RBP18.91■□□□□ 0.62
TRAPPC12-210ENST00000441983 FBXO3Q9UK99 471 aa18.91■□□□□ 0.62
TRAPPC12-210ENST00000441983 CHMP3Q9Y3E7 222 aa18.91■□□□□ 0.62
TRAPPC12-210ENST00000441983 LTBP3Q9NS15 1303 aa18.91■□□□□ 0.62
TRAPPC12-210ENST00000441983 GPR162Q16538 588 aa18.9■□□□□ 0.62
TRAPPC12-210ENST00000441983 RTKN2Q8IZC4 609 aa18.9■□□□□ 0.62
TRAPPC12-210ENST00000441983 SEC31BQ9NQW1 1179 aa18.9■□□□□ 0.62
TRAPPC12-210ENST00000441983 SUPT16HQ9Y5B9 1047 aaKnown RBP18.9■□□□□ 0.62
TRAPPC12-210ENST00000441983 CHD4Q14839 1912 aa18.9■□□□□ 0.62
TRAPPC12-210ENST00000441983 DICER1Q9UPY3 1922 aaKnown RBP18.9■□□□□ 0.62
TRAPPC12-210ENST00000441983 YBX3P16989 372 aaKnown RBP eCLIP18.89■□□□□ 0.61
TRAPPC12-210ENST00000441983 CCDC85AQ96PX6 553 aaPredicted RBP18.89■□□□□ 0.61
TRAPPC12-210ENST00000441983 SBF1O95248 1867 aa18.88■□□□□ 0.61
TRAPPC12-210ENST00000441983 C21orf2O43822 256 aa18.88■□□□□ 0.61
TRAPPC12-210ENST00000441983 PSMD1Q99460 953 aa18.88■□□□□ 0.61
TRAPPC12-210ENST00000441983 MPHOSPH8Q99549 860 aa18.88■□□□□ 0.61
TRAPPC12-210ENST00000441983 TAF7LQ5H9L4 462 aa18.87■□□□□ 0.61
TRAPPC12-210ENST00000441983 RPAP2Q8IXW5 612 aaPredicted RBP18.87■□□□□ 0.61
TRAPPC12-210ENST00000441983 DUOX1Q9NRD9 1551 aa18.87■□□□□ 0.61
TRAPPC12-210ENST00000441983 SRGAP3O43295 1099 aa18.86■□□□□ 0.61
TRAPPC12-210ENST00000441983 RFX5P48382 616 aaPredicted RBP18.86■□□□□ 0.61
TRAPPC12-210ENST00000441983 PELP1Q8IZL8 1130 aaKnown RBP18.86■□□□□ 0.61
TRAPPC12-210ENST00000441983 VPS33BQ9H267 617 aa18.86■□□□□ 0.61
TRAPPC12-210ENST00000441983 COPRSQ9NQ92 184 aa18.86■□□□□ 0.61
TRAPPC12-210ENST00000441983 PODXL2Q9NZ53 605 aa18.86■□□□□ 0.61
TRAPPC12-210ENST00000441983 CEP85Q6P2H3 762 aa18.85■□□□□ 0.61
TRAPPC12-210ENST00000441983 SUPT20HQ8NEM7 779 aa18.85■□□□□ 0.61
TRAPPC12-210ENST00000441983 SSH3Q8TE77 659 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms