RNA–Protein interactions for RNA: ENST00000441796.1

CRAT-204, Transcript of carnitine O-acetyltransferase, humanhuman

TSL 5

Gene CRAT, Length 831 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-204ENST00000441796 LINS1Q8NG48 757 aa29.2■■■□□ 2.26
CRAT-204ENST00000441796 IARSP41252 1262 aaKnown RBP29.19■■■□□ 2.26
CRAT-204ENST00000441796 H7C1W4 665 aa29.18■■■□□ 2.26
CRAT-204ENST00000441796 GCKRQ14397 625 aa29.18■■■□□ 2.26
CRAT-204ENST00000441796 SLC51AQ86UW1 340 aa29.18■■■□□ 2.26
CRAT-204ENST00000441796 JARID2Q92833 1246 aaPredicted RBP29.18■■■□□ 2.26
CRAT-204ENST00000441796 DDX60Q8IY21 1712 aaKnown RBP29.17■■■□□ 2.26
CRAT-204ENST00000441796 CCDC152Q4G0S7 254 aa29.16■■■□□ 2.26
CRAT-204ENST00000441796 CELF1Q92879 486 aaKnown RBP29.16■■■□□ 2.26
CRAT-204ENST00000441796 LAMB2P55268 1798 aa29.16■■■□□ 2.26
CRAT-204ENST00000441796 F6X3S4 739 aa29.15■■■□□ 2.26
CRAT-204ENST00000441796 RTFDC1Q9BY42 306 aaPredicted RBP29.15■■■□□ 2.26
CRAT-204ENST00000441796 VPS33BQ9H267 617 aa29.15■■■□□ 2.26
CRAT-204ENST00000441796 RRAGCQ9HB90 399 aa29.15■■■□□ 2.26
CRAT-204ENST00000441796 CACNA1FO60840 1977 aa29.15■■■□□ 2.26
CRAT-204ENST00000441796 BEND3Q5T5X7 828 aa29.14■■■□□ 2.26
CRAT-204ENST00000441796 MRPL50Q8N5N7 158 aaKnown RBP29.14■■■□□ 2.26
CRAT-204ENST00000441796 SUPT20HQ8NEM7 779 aa29.14■■■□□ 2.26
CRAT-204ENST00000441796 CT47B1P0C2W7 299 aaPredicted RBP29.13■■■□□ 2.25
CRAT-204ENST00000441796 RPS8P62241 208 aaKnown RBP29.13■■■□□ 2.25
CRAT-204ENST00000441796 MPNDQ8N594 471 aa29.13■■■□□ 2.25
CRAT-204ENST00000441796 TIAM2Q8IVF5 1701 aa29.12■■■□□ 2.25
CRAT-204ENST00000441796 TOMM70O94826 608 aa29.12■■■□□ 2.25
CRAT-204ENST00000441796 CTSWP56202 376 aa29.12■■■□□ 2.25
CRAT-204ENST00000441796 DPP8Q6V1X1 898 aaPredicted RBP29.12■■■□□ 2.25
CRAT-204ENST00000441796 UBE3BQ7Z3V4 1068 aa29.12■■■□□ 2.25
CRAT-204ENST00000441796 JDP2Q8WYK2 163 aa29.12■■■□□ 2.25
CRAT-204ENST00000441796 PLA2G12BQ9BX93 195 aa29.12■■■□□ 2.25
CRAT-204ENST00000441796 FZD9O00144 591 aa29.11■■■□□ 2.25
CRAT-204ENST00000441796 CASP7P55210 303 aa29.11■■■□□ 2.25
CRAT-204ENST00000441796 ALDH1L2Q3SY69 923 aa29.11■■■□□ 2.25
CRAT-204ENST00000441796 SSH1Q8WYL5 1049 aa29.11■■■□□ 2.25
CRAT-204ENST00000441796 SEC31BQ9NQW1 1179 aa29.11■■■□□ 2.25
CRAT-204ENST00000441796 VEGFAP15692 232 aaPredicted RBP29.1■■■□□ 2.25
CRAT-204ENST00000441796 TTLL11Q8NHH1 800 aa29.1■■■□□ 2.25
CRAT-204ENST00000441796 DICER1Q9UPY3 1922 aaKnown RBP29.1■■■□□ 2.25
CRAT-204ENST00000441796 CCDC88AQ3V6T2 1871 aa29.09■■■□□ 2.25
CRAT-204ENST00000441796 LARGE2Q8N3Y3 721 aa29.09■■■□□ 2.25
CRAT-204ENST00000441796 PTPRCP08575 1304 aa29.09■■■□□ 2.25
CRAT-204ENST00000441796 DDNO94850 711 aaPredicted RBP29.08■■■□□ 2.25
CRAT-204ENST00000441796 C16orf71Q8IYS4 520 aaPredicted RBP29.08■■■□□ 2.25
CRAT-204ENST00000441796 POTECB2RU33 542 aa29.07■■■□□ 2.24
CRAT-204ENST00000441796 PPIP5K2O43314 1243 aa29.07■■■□□ 2.24
CRAT-204ENST00000441796 RTL9Q8NET4 1388 aa29.07■■■□□ 2.24
CRAT-204ENST00000441796 CCDC85AQ96PX6 553 aaPredicted RBP29.07■■■□□ 2.24
CRAT-204ENST00000441796 ZNF541Q9H0D2 1346 aa29.06■■■□□ 2.24
CRAT-204ENST00000441796 ALDH1L1O75891 902 aa29.06■■■□□ 2.24
CRAT-204ENST00000441796 RBM46Q8TBY0 533 aaKnown RBP29.06■■■□□ 2.24
CRAT-204ENST00000441796 AOC3Q16853 763 aa29.05■■■□□ 2.24
CRAT-204ENST00000441796 ANKRD18AQ8IVF6 992 aa29.05■■■□□ 2.24
CRAT-204ENST00000441796 L3MBTL3Q96JM7 780 aaPredicted RBP29.05■■■□□ 2.24
CRAT-204ENST00000441796 CDC5LQ99459 802 aaKnown RBP29.05■■■□□ 2.24
CRAT-204ENST00000441796 SRCIN1Q9C0H9 1055 aa29.05■■■□□ 2.24
CRAT-204ENST00000441796 NSFL1CQ9UNZ2 370 aaKnown RBP29.05■■■□□ 2.24
CRAT-204ENST00000441796 CSF1RP07333 972 aa29.04■■■□□ 2.24
CRAT-204ENST00000441796 HNRNPUQ00839 825 aaKnown RBP eCLIP29.04■■■□□ 2.24
CRAT-204ENST00000441796 KIAA2012Q0VF49 1180 aa29.04■■■□□ 2.24
CRAT-204ENST00000441796 SLC4A10Q6U841 1118 aa29.04■■■□□ 2.24
CRAT-204ENST00000441796 NIM1KQ8IY84 436 aa29.04■■■□□ 2.24
CRAT-204ENST00000441796 COL4A1P02462 1669 aa29.03■■■□□ 2.24
CRAT-204ENST00000441796 EIF6P56537 245 aaKnown RBP29.03■■■□□ 2.24
CRAT-204ENST00000441796 BCL2L13Q9BXK5 485 aa29.03■■■□□ 2.24
CRAT-204ENST00000441796 GREM2Q9H772 168 aa29.03■■■□□ 2.24
CRAT-204ENST00000441796 SMC4Q9NTJ3 1288 aa29.03■■■□□ 2.24
CRAT-204ENST00000441796 WDR90Q96KV7 1748 aa29.03■■■□□ 2.24
CRAT-204ENST00000441796 COL4A5P29400 1685 aa29.02■■■□□ 2.24
CRAT-204ENST00000441796 GRM8O00222 908 aa29.02■■■□□ 2.24
CRAT-204ENST00000441796 BRPF1P55201 1214 aaPredicted RBP29.02■■■□□ 2.24
CRAT-204ENST00000441796 GPSM2P81274 684 aa29.02■■■□□ 2.24
CRAT-204ENST00000441796 PODXL2Q9NZ53 605 aa29.02■■■□□ 2.24
CRAT-204ENST00000441796 LRRC37AA6NMS7 1700 aa29.02■■■□□ 2.24
CRAT-204ENST00000441796 GPC2Q8N158 579 aa29.01■■■□□ 2.23
CRAT-204ENST00000441796 IQCA1LA6NCM1 817 aa28.99■■■□□ 2.23
CRAT-204ENST00000441796 FSTL1Q12841 308 aa28.99■■■□□ 2.23
CRAT-204ENST00000441796 BSDC1Q9NW68 430 aaPredicted RBP28.99■■■□□ 2.23
CRAT-204ENST00000441796 C9orf78Q9NZ63 289 aaPredicted RBP28.99■■■□□ 2.23
CRAT-204ENST00000441796 POLLQ9UGP5 575 aa28.99■■■□□ 2.23
CRAT-204ENST00000441796 ZNRF3Q9ULT6 936 aa28.99■■■□□ 2.23
CRAT-204ENST00000441796 DUOX1Q9NRD9 1551 aa28.99■■■□□ 2.23
CRAT-204ENST00000441796 TAF1P21675 1872 aa28.99■■■□□ 2.23
CRAT-204ENST00000441796 WASHC4Q2M389 1173 aa28.98■■■□□ 2.23
CRAT-204ENST00000441796 TBC1D16Q8TBP0 767 aa28.98■■■□□ 2.23
CRAT-204ENST00000441796 ITGA6P23229 1130 aa28.97■■■□□ 2.23
CRAT-204ENST00000441796 FOXO4P98177 505 aa28.97■■■□□ 2.23
CRAT-204ENST00000441796 EYA3Q99504 573 aa28.97■■■□□ 2.23
CRAT-204ENST00000441796 C6orf229H3BNL8 230 aa28.96■■■□□ 2.23
CRAT-204ENST00000441796 RARSP54136 660 aaKnown RBP28.96■■■□□ 2.23
CRAT-204ENST00000441796 FAM161AQ3B820 660 aa28.96■■■□□ 2.23
CRAT-204ENST00000441796 SMC1BQ8NDV3 1235 aa28.96■■■□□ 2.23
CRAT-204ENST00000441796 ANKIB1Q9P2G1 1089 aa28.96■■■□□ 2.23
CRAT-204ENST00000441796 UTYO14607 1347 aa28.95■■■□□ 2.23
CRAT-204ENST00000441796 HSPA6P17066 643 aa28.95■■■□□ 2.22
CRAT-204ENST00000441796 IGHMBP2P38935 993 aaKnown RBP28.95■■■□□ 2.22
CRAT-204ENST00000441796 GGA1Q9UJY5 639 aa28.95■■■□□ 2.22
CRAT-204ENST00000441796 XDHP47989 1333 aa28.94■■■□□ 2.22
CRAT-204ENST00000441796 HACL1Q9UJ83 578 aa28.94■■■□□ 2.22
CRAT-204ENST00000441796 MINPP1Q9UNW1 487 aa28.94■■■□□ 2.22
CRAT-204ENST00000441796 CXCL9Q07325 125 aa28.93■■■□□ 2.22
CRAT-204ENST00000441796 TAF1DQ9H5J8 278 aaPredicted RBP28.93■■■□□ 2.22
CRAT-204ENST00000441796 GJA3Q9Y6H8 435 aa28.93■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms